Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.54 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.71 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.94 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.94 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 17/75 (22%), Positives = 32/75 (42%)
 Frame = +3

Query: 174 ASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKEN 353
           AS   +N  KE+ ++  + P G       N +++  T SP+A    + Q+         N
Sbjct: 231 ASPPTVNIKKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASPLAY-QHEYNSFNWTAN 289

Query: 354 GNNGEASATEHSSSN 398
           G+    S+  + + N
Sbjct: 290 GHGHNTSSHNYYAQN 304


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 209 YRGATVCAFRWSKCGFSQCKCGASNQQPSRT*FC 310
           ++G T C+ + S C  + CK G + Q   +T  C
Sbjct: 136 WKGKT-CSLKDSHCDHTTCKNGGTCQDLGKTFMC 168


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 409 NYFSQMLQLQLKKIIRNLSLVELKQVIVM 495
           N  S    L L K I N+SL   KQV++M
Sbjct: 263 NLMSNAATLVLNKHIDNISLRARKQVVLM 291


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 357  NNGEASATEHSSSNGTTELLFTNAAAS 437
            NN   SAT +SS N  T  + TNA  +
Sbjct: 1006 NNRTHSATSNSSVNANTNNIPTNAGTT 1032


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 248 CGFSQCKCGASNQQPSRT 301
           C  S CK GAS+ +P+ T
Sbjct: 761 CWQSNCKKGASSDKPNFT 778


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 166 TKKLLKTDSMNPKRISRCHSL 228
           TK +++TD    K +SRC  L
Sbjct: 666 TKIIIRTDHQALKFLSRCRLL 686


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 156 KEKDKEASENRLNESKENIE 215
           KE++KE S++   E K+  E
Sbjct: 217 KEREKELSDDEAEEEKKEEE 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,106
Number of Sequences: 336
Number of extensions: 2412
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)