Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C07f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related... 33 0.12
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At2g36400.1 68415.m04467 expressed protein nearly identical to t... 33 0.15
At5g59700.1 68418.m07484 protein kinase, putative similar to rec... 31 0.62
At2g07770.1 68415.m01005 hypothetical protein low similarity to ... 30 0.82
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.1
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 29 1.4
At2g22795.1 68415.m02704 expressed protein 29 1.9
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 29 2.5
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 29 2.5
At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive eff... 28 3.3
At4g02800.1 68417.m00380 expressed protein similar to A. thalian... 28 3.3
At3g28770.1 68416.m03591 expressed protein 28 3.3
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 28 3.3
At5g06700.1 68418.m00757 expressed protein strong similarity to ... 28 4.4
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 28 4.4
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 28 4.4
At1g49920.1 68414.m05598 zinc finger protein-related weak simila... 28 4.4
At1g10620.1 68414.m01204 protein kinase family protein contains ... 28 4.4
At5g60740.1 68418.m07621 ABC transporter family protein similar ... 27 5.8
At5g04860.1 68418.m00509 expressed protein 27 5.8
At2g40270.2 68415.m04955 protein kinase family protein contains ... 27 5.8
At2g40270.1 68415.m04954 protein kinase family protein contains ... 27 5.8
At1g14380.2 68414.m01705 calmodulin-binding family protein conta... 27 5.8
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 27 7.7
At2g37440.2 68415.m04593 endonuclease/exonuclease/phosphatase fa... 27 7.7
At2g37440.1 68415.m04592 endonuclease/exonuclease/phosphatase fa... 27 7.7
At1g18570.1 68414.m02316 myb family transcription factor (MYB51)... 27 7.7
>At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 302
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +3
Query: 348 ENGNN--GEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNRD 494
EN N GE EH TELL N AA EN S R + N D
Sbjct: 178 ENRTNESGEEMLKEHEEEVANTELLNENGAAKTTENGTSSGKERHDEDNDD 228
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 300 PSFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAE 479
PS +E V EN N GEAS T+ S + T + T+ V+E N++S+ E
Sbjct: 160 PSLDLSHQSTEIVSSIENSNGGEAS-TQPDSQSATEAISHTD---DVEEGNRDSQEVSKE 215
Query: 480 TSNRD 494
T D
Sbjct: 216 TEEND 220
>At2g36400.1 68415.m04467 expressed protein nearly identical to
transcription activator GRL3 [Arabidopsis thaliana]
GI:21539884 (unpublished); supporting cDNA
gi|21539883|gb|AY102636.1|
Length = 398
Score = 32.7 bits (71), Expect = 0.15
Identities = 26/92 (28%), Positives = 40/92 (43%)
Frame = +3
Query: 192 NESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEA 371
N S++ +E P V ++AS A T + +F FG V+ + G
Sbjct: 180 NRSRKPVETPTTVNATATSMASSVAAAATTTTATTTSTFAFGGGGGSEEVVGQGG----- 234
Query: 372 SATEHSSSNGTTELLFTNAAASVKENNQESES 467
S SSN ++ELL + + S E QES +
Sbjct: 235 SFFFSGSSNSSSELL--HLSQSCSEMKQESNN 264
>At5g59700.1 68418.m07484 protein kinase, putative similar to
receptor-like protein kinase [Catharanthus roseus]
gi|1644291|emb|CAA97692
Length = 829
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +3
Query: 186 RLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENG--N 359
++N SK + + F+P G ++ +NV + + + V V+ K+ G
Sbjct: 378 KMNNSKSQLSIGTFLPSGSSSTTKKNVGMIIGLTIGSLLALVVLGGFF--VLYKKRGRDQ 435
Query: 360 NGEASATEHSSSNGTTELLFTNAAASVKENN 452
+G + SSNGTT AS+ N+
Sbjct: 436 DGNSKTWIPLSSNGTTSSSNGTTLASIASNS 466
>At2g07770.1 68415.m01005 hypothetical protein low similarity to KED
[Nicotiana tabacum] GI:8096269; contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 518
Score = 30.3 bits (65), Expect = 0.82
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 129 KPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVA 254
K + ES KEK+ SE + ES+++ EVPQ + G VA
Sbjct: 358 KDKVVAESEKEKEVAESEIGVAESEKDKEVPQDDEMDGGKVA 399
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo sapiens]
Length = 1322
Score = 29.9 bits (64), Expect = 1.1
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Frame = +3
Query: 147 ESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAP--SFVFGQ 320
++G+ E +EN +ES+ENI Q L R+ P T A P S +GQ
Sbjct: 788 QNGEINYHETTENHTSESRENIFCSQASNLSTEMARDRH----PITEGSAIPGDSMAYGQ 843
Query: 321 NLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNRDAL 500
L + + A E SS+G L+ TN+ ++ + TS+ A
Sbjct: 844 PLQAGDERGLDSRDVSAKLPESGSSSG---LVATNSKGKKQKAKNSQGPGLSSTSSNVAN 900
Query: 501 VA 506
+A
Sbjct: 901 LA 902
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 144 EESGKEKDKEASENRLNESKENIEVPQ 224
EE GKEK++E E R +E E E+P+
Sbjct: 484 EEEGKEKEEEKVEYRGDEETEKQEIPK 510
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 144 EESGKEKDKEASENRLNESKENIEVPQ 224
EE GKE+++E E R +E E E+P+
Sbjct: 444 EEEGKEEEEEKVEYRGDEGTEKQEIPK 470
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 144 EESGKEKDKEASENRLNESKENIEVPQ 224
EE GKE+++E E R +E E E+P+
Sbjct: 524 EEEGKEEEEEKVEYRGDEGTEKQEIPK 550
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.1 bits (62), Expect = 1.9
Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 7/129 (5%)
Frame = +3
Query: 129 KPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSF 308
K N I E G+E ++ SE ++ N E+ + GG V V +
Sbjct: 99 KENEIVEGGEENKEKESEGIVSNEDSNSEIEEKKDSGG--VEESEVEEKRDNGGGTEENE 156
Query: 309 VFGQNLSERVVIKENG--NNGEASATEHS-----SSNGTTELLFTNAAASVKENNQESES 467
G SE K+NG E S TE S NG TE N + +E+ E
Sbjct: 157 KSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTE---ENEKSGTEESEVEERK 213
Query: 468 SRAETSNRD 494
T +
Sbjct: 214 ENGGTEENE 222
Score = 27.9 bits (59), Expect = 4.4
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
Frame = +3
Query: 144 EESGKEKD---KEASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPSFVF 314
+E KEK+ KE E+ NES+EN+ + + + + +S
Sbjct: 612 QEETKEKETETKEKEESSSNESQENVNT-ESEKKEQVEENEKKTDEDTSESSKENSVSDT 670
Query: 315 GQNLSERVVIKENGN-NGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNR 491
Q SE KE N NGE T+ S + + TN VK+ + E + ++ N
Sbjct: 671 EQKQSEETSEKEESNKNGETEVTQEQSDSSSD----TNLPQEVKDVRTDLE-TLPDSGNG 725
Query: 492 DALVAAAAE 518
+ + AAE
Sbjct: 726 GSNESVAAE 734
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 GGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKE-NGNNGEASATEHSSSNGT 404
G NVAS++ + +P ++ PA+ S V G+N + +G +G A A H+ S G+
Sbjct: 296 GEGNVASQSPS-IPISSQPASSSVVPGENSPHANSASDISGQSGSAKA-RHALSTGS 350
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 GGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKE-NGNNGEASATEHSSSNGT 404
G NVAS++ + +P ++ PA+ S V G+N + +G +G A A H+ S G+
Sbjct: 296 GEGNVASQSPS-IPISSQPASSSVVPGENSPHANSASDISGQSGSAKA-RHALSTGS 350
>At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1311
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 264 VNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVK 443
V ++ N AP G+ V +N ++ +T NGT L + +A K
Sbjct: 101 VTSLKVPNDVGAPEREEGEWTESEVPANDNVHSSSDYSTVTEKDNGTLGLDINSDSALQK 160
Query: 444 EN-NQESESSRAETSNRDA 497
+N N SESS ++ + D+
Sbjct: 161 KNVNHISESSGKDSGSIDS 179
>At4g02800.1 68417.m00380 expressed protein similar to A. thaliana
hypothetical protein T6B20.12 (1946366)
Length = 333
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 90 RPPQLKATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQ 224
+PP + LK + I+ KE+D+E E++ + K +V Q
Sbjct: 116 KPPSYSEILHSNLKADQIQRQQKEEDEEEEESKGKKRKHESDVEQ 160
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.3 bits (60), Expect = 3.3
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Frame = +3
Query: 129 KPNPIEESGKEKDK-EASENRLNESKENIEVPQFVPLGGANVASRNVNAVPATNSPAAPS 305
K N +E K K +A+E+ N +KE + Q G + +N++ + A
Sbjct: 513 KDNSLENKEDVKPKVDANESDGNSTKERHQEAQVN--NGVSTEDKNLDNIGADEQKKNDK 570
Query: 306 FVF-----GQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVKENNQES-ES 467
V G + E+ + GNNGE+ E+ + + L + + K NN+ S E
Sbjct: 571 SVEVTTNDGDHTKEKRE-ETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEE 629
Query: 468 SRAET 482
R +T
Sbjct: 630 KREQT 634
Score = 27.1 bits (57), Expect = 7.7
Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Frame = +3
Query: 99 QLKATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGG--ANVASRNVNA 272
+LK K +EE+ K+K+ + +N+ + K+N GG ++ S + A
Sbjct: 1204 KLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTKQS----GGKKESMESESKEA 1259
Query: 273 VPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVKENN 452
S A ++ +E ++ ++ + + + S + L+ ++ A+ + NN
Sbjct: 1260 ENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNN 1319
Query: 453 QESESSRAETS 485
+E + +
Sbjct: 1320 EEDRKKQTSVA 1330
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 28.3 bits (60), Expect = 3.3
Identities = 30/135 (22%), Positives = 48/135 (35%)
Frame = +3
Query: 78 GSVLRPPQLKATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVAS 257
G + P +++NP PNP E S ++S N + + VP P +N
Sbjct: 82 GPITLPNPPDSSSNPNSNPNPPESSSNPNPPDSSSNPNSNPNPPVTVPN-PPESSSNPNP 140
Query: 258 RNVNAVPATNSPAAPSFVFGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAAS 437
+ ++ P +N P P N + V + + SSSN + S
Sbjct: 141 PDSSSNPNSN-PNPPE--SSSNPNPPVTVPNPPESSSNPNPPESSSNPNPPITIPYPPES 197
Query: 438 VKENNQESESSRAET 482
N E S E+
Sbjct: 198 SSPNPPEIVPSPPES 212
>At5g06700.1 68418.m00757 expressed protein strong similarity to
unknown protein (emb|CAB82953.1)
Length = 608
Score = 27.9 bits (59), Expect = 4.4
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 183 NRLNESKENIEVPQFVPLGGANVASRNVNA-VPATNSPAAPSFVFGQNLSERVVIKENGN 359
NR +++ +++ V P +N + + P T++P A + F E ++ NG
Sbjct: 106 NRSSDATDSLSVNATSPPLNSNSKNGTLQTPAPETHTPVAKNTTF-----ESPIV--NGT 158
Query: 360 NGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNRDALVAAA 512
N +A +N ++ L ++ +++ NNQ ++ ET NR+ + A
Sbjct: 159 NPDAK------NNTSSHPLLSDKSSTTGSNNQSRTTADTETVNRNQTTSPA 203
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 144 EESGKEKDKEASENRLNESKENIEVPQ 224
EE GKE+++E E R +E E E+P+
Sbjct: 431 EEEGKEEEEEKVEYRGDEGTEKQEIPK 457
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 144 EESGKEKDKEASENRLNESKENIEVPQ 224
EE GKE+++E E R +E E E+P+
Sbjct: 518 EEEGKEEEEEKVEYRGDEGTEKQEIPK 544
>At1g49920.1 68414.m05598 zinc finger protein-related weak
similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
mays] GI:1857256; contains Pfam profiles PF03108: MuDR
family transposase, PF04434: SWIM zinc finger
Length = 785
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 120 PFLKPNPIEESGKEKDKEASENRLNESKE 206
P ++P P + SGK K+K+ ++ L E ++
Sbjct: 727 PVIEPPPPKVSGKGKEKDTEDDHLEEDED 755
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 231 PLGGANVASRNVNAVPATNSPAAPSFVFGQNLSERVVIKENGN-NGEASATEHSSSNGTT 407
PLGG + N VP+++S +P + G N + N N NG+ ++ S+ + T
Sbjct: 206 PLGGES------NRVPSSSSSPSPPSLSGSNNHSGGSNRHNANSNGDGGTSQQSNESNYT 259
Query: 408 E 410
E
Sbjct: 260 E 260
>At5g60740.1 68418.m07621 ABC transporter family protein similar to
ATP-binding cassette, sub-family G, member 2
(Placenta-specific ATP- binding cassette transporter)
(Breast cancer resistance protein) SP:Q9UNQ0 from [Homo
sapiens]
Length = 1061
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +3
Query: 96 PQLKATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQ--FVPLGGANVASRNVN 269
P A P L + + GK+K+K L++ ++N E P+ + +G N+
Sbjct: 387 PGSDAALPPMLGSSSDTKKGKKKEKNKLTEMLHDIEQNPEDPEGFNLEIGDKNIKKHAPK 446
Query: 270 AVPATNSPAAPSFVFGQNLSERVVIKENGN 359
+ +GQ E+ + ++N N
Sbjct: 447 GKALHTQSQMFRYAYGQIEKEKAMQEQNKN 476
>At5g04860.1 68418.m00509 expressed protein
Length = 782
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 351 NGNNGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNRDALVAA 509
+G + E + SS T+ L AA E N+E+ESS A+ N L +A
Sbjct: 249 DGKSPERNLDSDSSYPFDTDSLDEGDAADESEENKENESSLADPVNYKTLRSA 301
>At2g40270.2 68415.m04955 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 482
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +3
Query: 108 ATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVP 278
ATT P P P + K SE + S +++ PL + + + ++VP
Sbjct: 75 ATTTPSSSPEPAPKHVSTKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRNSHSSVP 131
>At2g40270.1 68415.m04954 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 489
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = +3
Query: 108 ATTNPFLKPNPIEESGKEKDKEASENRLNESKENIEVPQFVPLGGANVASRNVNAVP 278
ATT P P P + K SE + S +++ PL + + + ++VP
Sbjct: 82 ATTTPSSSPEPAPKHVSTKASTVSEPQKRSSTQDVSPSPSAPLANSPIPRNSHSSVP 138
>At1g14380.2 68414.m01705 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 602
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 81 SVLRPPQLKATTNPFLKPNPIEESGKEKD-----KEASENRLNESKENIE 215
SV P+ K + N + + IE SGKEKD + SE ++ E +NIE
Sbjct: 370 SVQIQPEGKVSENVLEEGDNIESSGKEKDTGDSVQIESEGKVLEGGDNIE 419
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 357 NNGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSNRDA 497
+NG +S + HSS+ G+T T+ ++ N + + SN +
Sbjct: 101 HNGHSSGSNHSSATGSTHNGHTSTGSNHSSGNGSRHNGYSSGSNHSS 147
>At2g37440.2 68415.m04593 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 398
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 142 LKNQERRKTKKLLKTDSMNPKRISRCHSLCL*VEQMWLLAM*MRC 276
LKNQ RKTK + + NP CH + E++ LL C
Sbjct: 343 LKNQSNRKTKPVNQNHRPNPVLTYTCHGK-VQAEEILLLTRAQSC 386
>At2g37440.1 68415.m04592 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 479
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 142 LKNQERRKTKKLLKTDSMNPKRISRCHSLCL*VEQMWLLAM*MRC 276
LKNQ RKTK + + NP CH + E++ LL C
Sbjct: 424 LKNQSNRKTKPVNQNHRPNPVLTYTCHGK-VQAEEILLLTRAQSC 467
>At1g18570.1 68414.m02316 myb family transcription factor (MYB51)
contains PFAM profile: PF00249
Length = 352
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +3
Query: 312 FGQNLSERVVIKENGNNGEASATEHSSSNGTTELLFTNAAASVKENNQESESSRAETSN 488
FG+ +++ V+ + G+ G ++T H+++ TT + + E+ + + SS A TSN
Sbjct: 182 FGKRINQSVLSEIIGSGGPLASTSHTTNTTTTSVSVDS------ESVKSTSSSFAPTSN 234
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,621,092
Number of Sequences: 28952
Number of extensions: 205917
Number of successful extensions: 811
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -