Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C06f
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.85 
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   2.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   2.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   2.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   2.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   6.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   6.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 0.85
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +1

Query: 139  EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 267
            EYPKC+ V  +       +     +R  S     KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485



 Score = 22.6 bits (46), Expect = 1.1
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +2

Query: 230  CSWEKTQ*CAKPSKTTWTTIQPSRGGPVPNSPYSES 337
            C W+    C    +       P  GGP P S  SE+
Sbjct: 1247 CDWKYKVKCVGRKQLAQKYQLPKMGGPQPYSACSEN 1282


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 204 YLATWLQYRAHGKKHNDAQSHQRP 275
           YL  W+  R   + H D    +RP
Sbjct: 15  YLNIWVPQRLRIRHHGDKPPQERP 38


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 246 HNDAQSHQRPPGQQSSPRG 302
           H     HQ+PP QQ   +G
Sbjct: 199 HQQGPPHQQPPIQQQPNQG 217


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 246 HNDAQSHQRPPGQQSSPRG 302
           H     HQ+PP QQ   +G
Sbjct: 201 HQQGPPHQQPPIQQQPNQG 219


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 106 NYFVKIIQLLDEYPKCF 156
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +1

Query: 148  KCFIVG--ADNVGSQQMQQIRISLR 216
            KC I    ADN  ++Q+++I+ SLR
Sbjct: 1086 KCMICTYKADNKENEQLRKIQESLR 1110


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +1

Query: 148  KCFIVG--ADNVGSQQMQQIRISLR 216
            KC I    ADN  ++Q+++I+ SLR
Sbjct: 1086 KCMICTYKADNKENEQLRKIQESLR 1110


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 183 ATDAADPYLATWLQYR 230
           ATD    Y+A+W  YR
Sbjct: 22  ATDKVICYVASWAIYR 37


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory
          receptor candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 22 FCLVLKFHRSPYATLSR 72
          FCLV   HR  Y  LS+
Sbjct: 23 FCLVNFNHRESYFRLSK 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,386
Number of Sequences: 336
Number of extensions: 1854
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)