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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C06f
         (338 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...    82   1e-16
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...    82   1e-16
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...    82   1e-16
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25...    33   0.057
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26...    32   0.100
06_03_0546 + 21988896-21989009,21989039-21989422,21989475-21989699     29   0.70 
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13...    28   1.6  
10_08_0406 - 17688069-17690643,17691065-17691132                       28   2.1  
06_01_0179 - 1388602-1389572,1390060-1390129,1390346-1390439,139...    28   2.1  
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907...    27   2.8  
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225           27   2.8  
01_06_1399 - 37033066-37033263,37033603-37033673,37033763-370339...    27   2.8  
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281...    27   3.8  
03_02_0859 - 11853928-11854138,11854225-11854683,11854760-118549...    26   6.6  
05_01_0143 - 944169-947273                                             26   8.7  
01_06_1468 + 37574124-37574180,37574275-37574346,37574437-375745...    26   8.7  

>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score = 81.8 bits (193), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 48/69 (69%)
 Frame = +1

Query: 79  REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 258
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63

Query: 259 KAIKDHLDN 285
           + IK H DN
Sbjct: 64  RCIKVHADN 72


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score = 81.8 bits (193), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 48/69 (69%)
 Frame = +1

Query: 79  REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 258
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63

Query: 259 KAIKDHLDN 285
           + IK H DN
Sbjct: 64  RCIKVHADN 72


>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score = 81.8 bits (193), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 48/69 (69%)
 Frame = +1

Query: 79  REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 258
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63

Query: 259 KAIKDHLDN 285
           + IK H DN
Sbjct: 64  RCIKVHADN 72


>11_01_0033 -
           251730-251855,252068-252144,252228-252318,252644-252704,
           252800-252858,252955-253045,253238-253406,253760-253787
          Length = 233

 Score = 33.1 bits (72), Expect = 0.057
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 37  KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 216
           K  R+   TLS+  ++     K      I   ++ Y   ++   DN+ +Q+++ +R  L+
Sbjct: 3   KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62

Query: 217 GSS-IVLMGKNTM 252
            SS I L GK  M
Sbjct: 63  SSSRIFLAGKKVM 75


>12_01_0032 -
           266954-267079,267204-267245,267290-267366,267450-267540,
           267864-267924,268021-268079,268176-268266,268481-268698,
           268818-268824,269013-269148,270064-270307
          Length = 383

 Score = 32.3 bits (70), Expect = 0.100
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 49  SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 225
           S   TLS+  ++     K      I   ++ Y   ++   DN+ +Q+++ +R  L+ SS 
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202

Query: 226 IVLMGKNTM 252
           I L GK  M
Sbjct: 203 IFLAGKKVM 211


>06_03_0546 + 21988896-21989009,21989039-21989422,21989475-21989699
          Length = 240

 Score = 29.5 bits (63), Expect = 0.70
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 228 RAHGKKHNDAQSHQRPPGQQSSPRGGARYPIRP 326
           R   KKHN ++ H  PP    +PR     PI P
Sbjct: 72  RKKKKKHNKSKHHHTPPPPSPTPRPSPPSPICP 104


>06_01_0007 +
           130582-131544,132187-132264,132615-132732,133228-133271,
           133389-133448,133536-133588,133671-133837,133963-134167,
           134989-135046,135225-135281,135363-135608,135938-136002,
           136090-136158,136238-136331,136467-136607,137159-137304,
           137452-138110,138222-138335,138406-138560
          Length = 1163

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 243 KHNDAQSHQRPPGQQSSPRGGARYPI 320
           K  D  SHQ  P  QS PRG   +PI
Sbjct: 19  KEGDDGSHQDTPTLQSPPRGSDAHPI 44


>10_08_0406 - 17688069-17690643,17691065-17691132
          Length = 880

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 120 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 272
           D P   R  ++FHR  R RG A D A D     W+    +    ND Q H +
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839


>06_01_0179 -
           1388602-1389572,1390060-1390129,1390346-1390439,
           1390587-1390687,1391152-1391220,1391328-1391482,
           1392193-1392241,1392611-1392739,1392825-1393580,
           1394711-1394902
          Length = 861

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 184 QQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGG 306
           QQ QQ++ +   S +   G       A  DH++NN A++GG
Sbjct: 728 QQQQQLQHAPANSGLASGGTAITGSAASGDHMNNNGAVKGG 768


>11_06_0395 + 23088737-23088823,23090198-23090346,23090570-23090708,
            23090795-23090889,23090967-23091080,23091674-23091803,
            23091931-23092052,23092889-23093007,23093946-23094034,
            23094072-23094245,23094310-23094616,23094726-23095180,
            23095334-23096315,23096381-23097396,23097757-23097792,
            23098065-23098130
          Length = 1359

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 142  YPKCFI--VGADNVGSQQMQQIRISLRGSSIV 231
            Y KC I  VG DN+  Q MQQ R SL    I+
Sbjct: 1292 YTKCLIISVGRDNIPWQWMQQNRTSLETLEIL 1323


>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
          Length = 554

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +1

Query: 100 KSNYFVKIIQLLDEYPKCF 156
           +++Y VKII+LL EY  CF
Sbjct: 68  RADYKVKIIELLKEYVDCF 86


>01_06_1399 -
           37033066-37033263,37033603-37033673,37033763-37033910,
           37034407-37034504,37034748-37034864,37035025-37035103,
           37035179-37035298,37035465-37035587,37036016-37036058,
           37036157-37036470
          Length = 436

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 197 RSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRGGPVPNSP 325
           R+ SR  AP +  W + +    PS+      +PS   P P SP
Sbjct: 22  RAASRAAAPAALLWRRLRGLEHPSRWPERLGRPSVARPRPGSP 64


>10_01_0266 +
           2816391-2818898,2818934-2819162,2819369-2819444,
           2819776-2819830,2822042-2822110,2823077-2823321,
           2824029-2824065
          Length = 1072

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 25  CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 150
           CL L+F      T  R  R  K T K   +  II++L+ YP+
Sbjct: 812 CLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853


>03_02_0859 -
           11853928-11854138,11854225-11854683,11854760-11854991,
           11855064-11855187,11855276-11855960,11856429-11856735,
           11856832-11858188
          Length = 1124

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 10/57 (17%), Positives = 30/57 (52%)
 Frame = +1

Query: 148 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGPGTQ 318
           +  ++G   +  ++ Q+ +++   +S  L+G+  ++R  +  +++ N  L G  G +
Sbjct: 622 RTLVIGVRELSQEEFQEWQMAYEKASTALLGRGGLLR-GVAANIEQNLCLLGASGIE 677


>05_01_0143 - 944169-947273
          Length = 1034

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 241 KNTMMRKAIKDHLDNNPALEGGPGTQFA 324
           +NT + K++ +  +  PAL  GPG  ++
Sbjct: 345 ENTELEKSLHELEEEKPALNSGPGESYS 372


>01_06_1468 +
           37574124-37574180,37574275-37574346,37574437-37574513,
           37574897-37574978,37576005-37576069,37576313-37576354,
           37576452-37576503,37576631-37576679,37576784-37576797,
           37576942-37577049,37577129-37577272,37577421-37577810
          Length = 383

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 216 WLQYRAHGKKHNDAQSHQRPPGQQSSP 296
           +LQY +H +   D  SH R P Q   P
Sbjct: 74  YLQYSSHQELTTDQSSHGRNPDQAFKP 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,172,367
Number of Sequences: 37544
Number of extensions: 225548
Number of successful extensions: 607
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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