Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C06f
         (338 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   1.4  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   1.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   1.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   4.2  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         22   5.5  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    21   9.6  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 234  HGKKHNDAQSHQRPPGQQSSPRGGARYP 317
            H   H++     +PPG +    GG + P
Sbjct: 1402 HPHHHHNGSGRSKPPGPEGVGGGGGKSP 1429


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = +3

Query: 216 WLQYRAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
           W Q R   +K  DA       G  SSP GG   P
Sbjct: 243 WFQNRRVKRKKGDAPFGAELSGGVSSPVGGRNSP 276


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 177 GLATDAADPYLATWLQYRAHGKKHNDAQSHQR 272
           G ATD  +  LA   Q + H  +H   Q HQ+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQ 324


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 228  RAHGKKHNDAQSHQRPPGQQSSPRGGAR 311
            RA   +  + Q   RPP    SPR  AR
Sbjct: 1053 RAARARQRELQRAGRPPSPPPSPRTAAR 1080


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 257 AKPSKTTWTTIQPSRGGPVPNSP 325
           A  S TT TT++P+   P P  P
Sbjct: 122 APKSTTTTTTVKPTTTTPPPCPP 144


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 320 NWVPGPPSRAGLLSRWSLMALRII 249
           N +PG P   GL++    MAL  +
Sbjct: 501 NLIPGTPEERGLVAWSKEMALETV 524


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,456
Number of Sequences: 2352
Number of extensions: 7079
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)