Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C06f
(338 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 143 1e-34
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 143 1e-34
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 143 1e-34
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 143 1e-34
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 143 1e-34
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 143 1e-34
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 142 3e-34
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 142 3e-34
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 33 0.30
BC018398-1|AAH18398.1| 483|Homo sapiens Unknown (protein for IM... 33 0.30
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 33 0.30
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 33 0.30
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 30 2.1
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 30 2.1
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 30 2.1
AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13 ... 29 4.8
AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13 ... 29 4.8
AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein. 29 4.8
AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13 ... 29 4.8
BC113372-1|AAI13373.1| 792|Homo sapiens protocadherin alpha 12 ... 28 6.4
BC112280-1|AAI12281.1| 792|Homo sapiens protocadherin alpha 12,... 28 6.4
AF152477-1|AAD43738.1| 792|Homo sapiens protocadherin alpha 12 ... 28 6.4
AF152475-1|AAD43736.1| 844|Homo sapiens protocadherin alpha 10 ... 28 6.4
AF152308-1|AAD43702.1| 941|Homo sapiens protocadherin alpha 12 ... 28 6.4
AF152306-1|AAD43700.1| 948|Homo sapiens protocadherin alpha 10 ... 28 6.4
AC005609-4|AAC34317.1| 844|Homo sapiens KIAA0345-like 4 protein. 28 6.4
AC005609-2|AAC34315.1| 792|Homo sapiens KIAA0345-like 2 protein. 28 6.4
AF015251-1|AAB67803.1| 97|Homo sapiens unknown protein. 28 8.5
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 143 bits (346), Expect = 1e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 142 bits (343), Expect = 3e-34
Identities = 64/76 (84%), Positives = 72/76 (94%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 142 bits (343), Expect = 3e-34
Identities = 63/76 (82%), Positives = 73/76 (96%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 204 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP-RGGARYPIRPI 329
Y+ + +R HG+K D RPP + P +GG P+ P+
Sbjct: 1270 YVQRYRYFRKHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL 1312
>BC018398-1|AAH18398.1| 483|Homo sapiens Unknown (protein for
IMAGE:3881197) protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 204 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP-RGGARYPIRPI 329
Y+ + +R HG+K D RPP + P +GG P+ P+
Sbjct: 441 YVQRYRYFRKHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL 483
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 204 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP-RGGARYPIRPI 329
Y+ + +R HG+K D RPP + P +GG P+ P+
Sbjct: 1301 YVQRYRYFRKHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL 1343
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 204 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP-RGGARYPIRPI 329
Y+ + +R HG+K D RPP + P +GG P+ P+
Sbjct: 1270 YVQRYRYFRKHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL 1312
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 201 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPR 299
P L ++Y HGK+H DA + P +++SPR
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPR 442
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 201 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPR 299
P L ++Y HGK+H DA + P +++SPR
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPR 442
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 201 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPR 299
P L ++Y HGK+H DA + P +++SPR
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPR 64
>AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13
short form protein protein.
Length = 807
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 297
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 565
>AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13
protein.
Length = 950
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 297
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 565
>AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein.
Length = 807
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 297
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 565
>AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13
isoform 1 precursor variant protein.
Length = 921
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 297
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 546 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 582
>BC113372-1|AAI13373.1| 792|Homo sapiens protocadherin alpha 12
protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + + +G N ++ + D DN PAL P
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATP 569
>BC112280-1|AAI12281.1| 792|Homo sapiens protocadherin alpha 12,
isoform 2 precursor protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + + +G N ++ + D DN PAL P
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATP 569
>AF152477-1|AAD43738.1| 792|Homo sapiens protocadherin alpha 12
short form protein protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + + +G N ++ + D DN PAL P
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATP 569
>AF152475-1|AAD43736.1| 844|Homo sapiens protocadherin alpha 10
short form protein protein.
Length = 844
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + +G N ++ + D DN PAL P
Sbjct: 528 ELLQFQVSARDGGVPPLGSNLTLQVFVLDENDNAPALLASP 568
>AF152308-1|AAD43702.1| 941|Homo sapiens protocadherin alpha 12
protein.
Length = 941
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + + +G N ++ + D DN PAL P
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATP 569
>AF152306-1|AAD43700.1| 948|Homo sapiens protocadherin alpha 10
protein.
Length = 948
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + +G N ++ + D DN PAL P
Sbjct: 528 ELLQFQVSARDGGVPPLGSNLTLQVFVLDENDNAPALLASP 568
>AC005609-4|AAC34317.1| 844|Homo sapiens KIAA0345-like 4 protein.
Length = 844
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + +G N ++ + D DN PAL P
Sbjct: 528 ELLQFQVSARDGGVPPLGSNLTLQVFVLDENDNAPALLASP 568
>AC005609-2|AAC34315.1| 792|Homo sapiens KIAA0345-like 2 protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 187 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGP 309
++ Q ++S R + + +G N ++ + D DN PAL P
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLATP 569
>AF015251-1|AAB67803.1| 97|Homo sapiens unknown protein.
Length = 97
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 228 RAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
++ G +H SH RPP ++ P+GG P
Sbjct: 27 KSQGLEHVVGVSHGRPPHAKTGPQGGMGQP 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,396,866
Number of Sequences: 237096
Number of extensions: 1211775
Number of successful extensions: 6850
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 6748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6850
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -