Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C06f
(338 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 127 3e-30
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 127 3e-30
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 127 3e-30
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 127 3e-30
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 33 0.095
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 33 0.095
AE014296-3477|AAF51682.1| 314|Drosophila melanogaster CG12976-P... 29 2.0
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 27 6.2
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 27 6.2
AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p pro... 27 6.2
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 27 6.2
AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-P... 27 6.2
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 27 6.2
AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,... 27 6.2
AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,... 27 6.2
AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,... 27 6.2
AE014297-4613|AAN14237.1| 505|Drosophila melanogaster CG31371-P... 27 8.2
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 127 bits (307), Expect = 3e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 127 bits (307), Expect = 3e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 127 bits (307), Expect = 3e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 127 bits (307), Expect = 3e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 253 MRKAIKDHLDNNPALE 300
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.095
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 46 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 225
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 226 IVLMGKNTMMR 258
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.095
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 46 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 225
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 226 IVLMGKNTMMR 258
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AE014296-3477|AAF51682.1| 314|Drosophila melanogaster CG12976-PA
protein.
Length = 314
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 177 GLATDAADPYLATWLQYRAHGKKHNDAQSHQ---RPPGQQSSPRGGARYPIRP 326
G + ++ Y+ + +Y + H +Q HQ P GQQ P YP RP
Sbjct: 47 GYGSSSSASYMPNYYRYAPYASPHY-SQHHQGMFTPAGQQIIPSSVLHYPPRP 98
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p
protein.
Length = 884
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 183 ATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
A AA A Q ++ G+ H A SH P Q P YP
Sbjct: 251 AAAAAADQAAAQSQSQSQGQSHGHAHSHAHNPQQAQHPPQPQPYP 295
>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p protein.
Length = 2201
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 183 ATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
A AA A Q ++ G+ H A SH P Q P YP
Sbjct: 996 AAAAAADQAAAQSQSQSQGQSHGHAHSHAHNPQQAQHPPQPQPYP 1040
>AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p
protein.
Length = 868
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 180 LATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGA 308
+AT P A H H +HQ PPG +P GA
Sbjct: 573 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 615
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 183 ATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
A AA A Q ++ G+ H A SH P Q P YP
Sbjct: 251 AAAAAADQAAAQSQSQSQGQSHGHAHSHAHNPQQAQHPPQPQPYP 295
>AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-PC,
isoform C protein.
Length = 1280
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 183 ATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
A AA A Q ++ G+ H A SH P Q P YP
Sbjct: 75 AAAAAADQAAAQSQSQSQGQSHGHAHSHAHNPQQAQHPPQPQPYP 119
>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
isoform A protein.
Length = 2529
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 183 ATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGARYP 317
A AA A Q ++ G+ H A SH P Q P YP
Sbjct: 1324 AAAAAADQAAAQSQSQSQGQSHGHAHSHAHNPQQAQHPPQPQPYP 1368
>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
isoform C protein.
Length = 1173
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 180 LATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGA 308
+AT P A H H +HQ PPG +P GA
Sbjct: 878 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 920
>AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,
isoform B protein.
Length = 868
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 180 LATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGA 308
+AT P A H H +HQ PPG +P GA
Sbjct: 573 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 615
>AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,
isoform A protein.
Length = 868
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 180 LATDAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRGGA 308
+AT P A H H +HQ PPG +P GA
Sbjct: 573 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 615
>AE014297-4613|AAN14237.1| 505|Drosophila melanogaster CG31371-PA
protein.
Length = 505
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 254 CAKPSKTTWTTIQPSRGGPVPNSPY 328
C + W +QPSR PV + PY
Sbjct: 307 CQLDGSSPWLLLQPSRLEPVSSDPY 331
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,803,078
Number of Sequences: 53049
Number of extensions: 349911
Number of successful extensions: 1543
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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