Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C04f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    85   7e-17
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    85   7e-17
AY119586-1|AAM50240.1|  719|Drosophila melanogaster LD15094p pro...    37   0.019
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    37   0.019
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    37   0.019
EU000366-1|ABS19623.1|  562|Drosophila melanogaster truncated cr...    35   0.077
AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinles...    35   0.077
AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-P...    35   0.077
AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA...    32   0.41 
AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin p...    32   0.41 
AY071351-1|AAL48973.1|  564|Drosophila melanogaster RE38869p pro...    31   1.3  
AE014134-2108|AAN10789.1|  564|Drosophila melanogaster CG14935-P...    31   1.3  
AE014134-2107|AAF53128.2|  583|Drosophila melanogaster CG14935-P...    31   1.3  
BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p pro...    28   6.7  
AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p pro...    28   6.7  
AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC...    28   6.7  
AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB...    28   6.7  
AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA...    28   6.7  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3    TQESRDLAEAIHSYVQKKLRNQKCDDEKELRVVYQKLITAVTSLVQFLRTQLNEFGIINT 182
            T E+ +  + +H Y+  KL+ +  D+EK +  + Q LI AV S+   +R+     G  + 
Sbjct: 2669 TPETSEFLQKLHDYLIAKLKQEHIDNEKYIEELGQLLIKAVRSIWVSIRSTYP--GSSDH 2726

Query: 183  TPDFANFFAAPS----SIKSAPSLAGEATWSFFKQLYSGDFPDILALLRAYRPRSINPLD 350
              DF ++  + +    S+   PS+    + S    L + ++  +      Y     N  +
Sbjct: 2727 VIDFQSWIGSLTHSFDSLAVLPSILSFRS-SILNCLLNENWDVVFNKKLLYSWIFFNDFE 2785

Query: 351  EVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHEHVDRNFTLLIQLQNGKPKAL 521
                 LR  VV+G+HIFTFDG +  +PGNC+Y+LA + VD NFT++ QL NGK K++
Sbjct: 2786 -----LRGHVVDGKHIFTFDGLNFAYPGNCKYILAQDSVDNNFTIIGQLTNGKLKSI 2837


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 4/177 (2%)
 Frame = +3

Query: 3    TQESRDLAEAIHSYVQKKLRNQKCDDEKELRVVYQKLITAVTSLVQFLRTQLNEFGIINT 182
            T E+ +  + +H Y+  KL+ +  D+EK +  + Q LI AV S+   +R+     G  + 
Sbjct: 2669 TPETSEFLQKLHDYLIAKLKQEHIDNEKYIEELGQLLIKAVRSIWVSIRSTYP--GSSDH 2726

Query: 183  TPDFANFFAAPS----SIKSAPSLAGEATWSFFKQLYSGDFPDILALLRAYRPRSINPLD 350
              DF ++  + +    S+   PS+    + S    L + ++  +      Y     N  +
Sbjct: 2727 VIDFQSWIGSLTHSFDSLAVLPSILSFRS-SILNCLLNENWDVVFNKKLLYSWIFFNDFE 2785

Query: 351  EVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHEHVDRNFTLLIQLQNGKPKAL 521
                 LR  VV+G+HIFTFDG +  +PGNC+Y+LA + VD NFT++ QL NGK K++
Sbjct: 2786 -----LRGHVVDGKHIFTFDGLNFAYPGNCKYILAQDSVDNNFTIIGQLTNGKLKSI 2837


>AY119586-1|AAM50240.1|  719|Drosophila melanogaster LD15094p
           protein.
          Length = 719

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 12/58 (20%)
 Frame = +3

Query: 357 PSKLRAVVVNGQHIFTFDGRH----LTFP--GN------CRYVLAHEHVDRNFTLLIQ 494
           P   RA++++ +H  TFD R+    L F   GN      C Y+LAH+   RNFTLL++
Sbjct: 127 PYYSRALLIDSRHYMTFDQRYVGLNLNFDELGNGRSTSQCSYLLAHDFFKRNFTLLLE 184


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
            isoform A protein.
          Length = 4345

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 12/58 (20%)
 Frame = +3

Query: 357  PSKLRAVVVNGQHIFTFDGRH----LTFP--GN------CRYVLAHEHVDRNFTLLIQ 494
            P   RA++++ +H  TFD R+    L F   GN      C Y+LAH+   RNFTLL++
Sbjct: 3753 PYYSRALLIDSRHYMTFDQRYVGLNLNFDELGNGRSTSQCSYLLAHDFFKRNFTLLLE 3810


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
            isoform B protein.
          Length = 4374

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 12/58 (20%)
 Frame = +3

Query: 357  PSKLRAVVVNGQHIFTFDGRH----LTFP--GN------CRYVLAHEHVDRNFTLLIQ 494
            P   RA++++ +H  TFD R+    L F   GN      C Y+LAH+   RNFTLL++
Sbjct: 3782 PYYSRALLIDSRHYMTFDQRYVGLNLNFDELGNGRSTSQCSYLLAHDFFKRNFTLLLE 3839


>EU000366-1|ABS19623.1|  562|Drosophila melanogaster truncated
           crossveinless 2 protein.
          Length = 562

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 378 VVNGQHIFTFDGRHLTFPGNCRYVLAHEHVDRNF 479
           V    H  TFDG+  +F G+C+Y+LA + + + F
Sbjct: 385 VFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKTF 418


>AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinless 2
           protein.
          Length = 751

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 378 VVNGQHIFTFDGRHLTFPGNCRYVLAHEHVDRNF 479
           V    H  TFDG+  +F G+C+Y+LA + + + F
Sbjct: 385 VFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKTF 418


>AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-PA
           protein.
          Length = 751

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 378 VVNGQHIFTFDGRHLTFPGNCRYVLAHEHVDRNF 479
           V    H  TFDG+  +F G+C+Y+LA + + + F
Sbjct: 385 VFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKTF 418


>AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA
            protein.
          Length = 3843

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +3

Query: 393  HIFTFDGRHLTFPGNCRYVLAHEHVDRNFTLLIQLQN 503
            H  TFDG    F G C YVLA    D      I +QN
Sbjct: 1345 HFTTFDGHDFDFQGACDYVLAKGVFDNGDGFSITIQN 1381


>AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin
            protein.
          Length = 3843

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +3

Query: 393  HIFTFDGRHLTFPGNCRYVLAHEHVDRNFTLLIQLQN 503
            H  TFDG    F G C YVLA    D      I +QN
Sbjct: 1345 HFTTFDGHDFDFQGACDYVLAKGVFDNGDGFSITIQN 1381


>AY071351-1|AAL48973.1|  564|Drosophila melanogaster RE38869p
           protein.
          Length = 564

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +3

Query: 63  NQKCDDEKELRVVYQKLITAVTSLVQFLRTQLNEFGIINTTPDFANFFAAPSSIKSAPSL 242
           +Q   ++ +L     K++ A+  ++ F    LN+ G+     D  N      S+K  P L
Sbjct: 175 HQFTKEQPDLNYRNPKVVQAMDDVLLFW---LNK-GVAGFRIDAVNHLFEDESLKDEP-L 229

Query: 243 AGEAT----WSFFKQLYSGDFPDILALLRAYR 326
           +G+ T    + + K +YS D P++L ++  +R
Sbjct: 230 SGKTTDSLSYDYTKHIYSRDLPEVLEMIHHWR 261


>AE014134-2108|AAN10789.1|  564|Drosophila melanogaster CG14935-PA,
           isoform A protein.
          Length = 564

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +3

Query: 63  NQKCDDEKELRVVYQKLITAVTSLVQFLRTQLNEFGIINTTPDFANFFAAPSSIKSAPSL 242
           +Q   ++ +L     K++ A+  ++ F    LN+ G+     D  N      S+K  P L
Sbjct: 175 HQFTKEQPDLNYRNPKVVQAMDDVLLFW---LNK-GVAGFRIDAVNHLFEDESLKDEP-L 229

Query: 243 AGEAT----WSFFKQLYSGDFPDILALLRAYR 326
           +G+ T    + + K +YS D P++L ++  +R
Sbjct: 230 SGKTTDSLSYDYTKHIYSRDLPEVLEMIHHWR 261


>AE014134-2107|AAF53128.2|  583|Drosophila melanogaster CG14935-PB,
           isoform B protein.
          Length = 583

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
 Frame = +3

Query: 63  NQKCDDEKELRVVYQKLITAVTSLVQFLRTQLNEFGIINTTPDFANFFAAPSSIKSAPSL 242
           +Q   ++ +L     K++ A+  ++ F    LN+ G+     D  N      S+K  P L
Sbjct: 194 HQFTKEQPDLNYRNPKVVQAMDDVLLFW---LNK-GVAGFRIDAVNHLFEDESLKDEP-L 248

Query: 243 AGEAT----WSFFKQLYSGDFPDILALLRAYR 326
           +G+ T    + + K +YS D P++L ++  +R
Sbjct: 249 SGKTTDSLSYDYTKHIYSRDLPEVLEMIHHWR 280


>BT022527-1|AAY54943.1|  307|Drosophila melanogaster IP07888p
           protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 FPDILALLRAYRPRSINPLDEVPSKLRAVVVNGQHI-FTFDGRH 419
           F DILA+ R  RPRS+    E+    + V+   Q +  T DG+H
Sbjct: 248 FEDILAIARVMRPRSM--ARELKGTCKEVLGTAQSVGCTVDGKH 289


>AY071246-1|AAL48868.1|  165|Drosophila melanogaster RE28824p
           protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 FPDILALLRAYRPRSINPLDEVPSKLRAVVVNGQHI-FTFDGRH 419
           F DILA+ R  RPRS+    E+    + V+   Q +  T DG+H
Sbjct: 106 FEDILAIARVMRPRSM--ARELKGTCKEVLGTAQSVGCTVDGKH 147


>AE013599-3797|AAF47152.1|  165|Drosophila melanogaster CG3195-PC,
           isoform C protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 FPDILALLRAYRPRSINPLDEVPSKLRAVVVNGQHI-FTFDGRH 419
           F DILA+ R  RPRS+    E+    + V+   Q +  T DG+H
Sbjct: 106 FEDILAIARVMRPRSM--ARELKGTCKEVLGTAQSVGCTVDGKH 147


>AE013599-3796|AAM68299.1|  165|Drosophila melanogaster CG3195-PB,
           isoform B protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 FPDILALLRAYRPRSINPLDEVPSKLRAVVVNGQHI-FTFDGRH 419
           F DILA+ R  RPRS+    E+    + V+   Q +  T DG+H
Sbjct: 106 FEDILAIARVMRPRSM--ARELKGTCKEVLGTAQSVGCTVDGKH 147


>AE013599-3795|AAM68298.1|  165|Drosophila melanogaster CG3195-PA,
           isoform A protein.
          Length = 165

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 FPDILALLRAYRPRSINPLDEVPSKLRAVVVNGQHI-FTFDGRH 419
           F DILA+ R  RPRS+    E+    + V+   Q +  T DG+H
Sbjct: 106 FEDILAIARVMRPRSM--ARELKGTCKEVLGTAQSVGCTVDGKH 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,669,361
Number of Sequences: 53049
Number of extensions: 423157
Number of successful extensions: 1906
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1906
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)