Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.0
Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.5
AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 28 4.7
Z69716-1|CAA93526.1| 486|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL032637-21|CAA21618.2| 612|Caenorhabditis elegans Hypothetical... 27 6.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 8.1
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 27 8.1
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 27 8.1
>Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical
protein T02G6.7 protein.
Length = 268
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 339 NPLDEVPSKLRAVVVNG---QHIFTFDGRHLTFPGNCRYV 449
+PLD P K+ + ++N ++ TFDG F NCR++
Sbjct: 77 DPLDLFPMKMESPLINFLDFKYNITFDGEIWNFKYNCRFI 116
>Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical
protein F46B3.1 protein.
Length = 186
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 277 CTPVISLTSW---PFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSP 426
C P I + W P + + H TKC LS L V T + +T T+P
Sbjct: 88 CPPAICVDQWDNCPLYKLINQCTRYHKTKCPLSCGLCTGNVTTPATTTSTTTP 140
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 265 SSSSCTPVISL-TSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 441
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 442 ATYWRTSTSIE 474
+T T+T+ E
Sbjct: 358 STSIPTTTTPE 368
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 265 SSSSCTPVISL-TSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQETV 441
S+S+ T +S TS P + T ST T +S T SS ST+ +SPS T+
Sbjct: 299 STSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSS-STITSSPSSTTL 357
Query: 442 ATYWRTSTSIE 474
+T T+T+ E
Sbjct: 358 STSIPTTTTPE 368
>Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical
protein F17A2.9 protein.
Length = 316
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 152 SPQELDERCNSCDQLLIDHAELLLIIAFLVTEFLLNVGVDCFGQI 18
SP E ++ N + ++ DH+ + +I+ ++ FLL V + FG +
Sbjct: 153 SPNEAQKKFNELNAIITDHSVIGYVISGRISSFLLTVII--FGSV 195
>AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 309 LLRAYRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVLAHEHVDRNFTLL 488
L+ RP L VP K+R + + + ++ G+ T + + ++ E + NF+ L
Sbjct: 83 LVSRLRPDFNGTLASVPYKVRNIDGYLKKLGSYSGKRPTLSSDLQLMITFEQEESNFSDL 142
Query: 489 IQLQNGKP 512
LQN P
Sbjct: 143 QFLQNQFP 150
>Z69716-1|CAA93526.1| 486|Caenorhabditis elegans Hypothetical
protein C04B4.1 protein.
Length = 486
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 291 FPDILALLRAYRPRSINP-LDEVPSKLRAVVVNGQHIFTFDGRH 419
F I+A L Y S+ + + +KLR + H+F DG H
Sbjct: 188 FCSIIAQLSLYAENSLKKYIGDSTTKLRVFIERRTHLFRVDGEH 231
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 321 YRPRSINPLDEVPSKLRAVVVNGQHIFTFDGRHLTFPGNCRYVL 452
Y R N + + + H+ T+DG T PG YVL
Sbjct: 837 YWRRMTNGCQDYRAPAAGYIYGEPHVITYDGIRYTMPGKGYYVL 880
>AL032637-21|CAA21618.2| 612|Caenorhabditis elegans Hypothetical
protein Y43F8C.3 protein.
Length = 612
Score = 27.5 bits (58), Expect = 6.2
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Frame = +3
Query: 225 KSAPSLAGEATWSF-FKQLYSGDFPDILAL-LRAYRPRSINPLD-EVPSKLRAVVVNGQH 395
K A G+ W+ K G+ +L + A P ++ L + ++ VV+ +
Sbjct: 23 KEAVMKLGKTEWAIRLKLCKQGENHSYYSLHVAALTPNQVSRLQIKCTHQVEPPVVDWEQ 82
Query: 396 IFTFDGRHLTFPGNCRYVLAHEHVDRNFTLLIQLQNGKPK 515
+TF G H C +A + F + ++L N K
Sbjct: 83 EYTFGGAHTVLVNPCLLKIAEQKEKMTFVVELKLLNDSEK 122
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 259 GASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSALLL*TVNTSSRSTVATSPSQET 438
G+S +S +PV S TS + PT S+ +S + T++ +S + + S + +T
Sbjct: 1405 GSSKASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSGSTSPSTNSQT 1464
Query: 439 VATYWRTSTS 468
+T S+S
Sbjct: 1465 GSTVTMGSSS 1474
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +3
Query: 201 FFAAPSSIKSAPSLAGEATWSFFKQLYSGDFPDILALLRAYRPRSINPLDEVPSKLRAVV 380
FF + A + E + FK+ +F D + Y R ++P DE K + V
Sbjct: 135 FFTFNDDKRPANRILQELIYVSFKEDTGKEFEDTRDKVYKYYTRGVDPTDEKKLKEKLVE 194
Query: 381 VNGQHIF 401
G IF
Sbjct: 195 FLGDFIF 201
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +3
Query: 201 FFAAPSSIKSAPSLAGEATWSFFKQLYSGDFPDILALLRAYRPRSINPLDEVPSKLRAVV 380
FF + A + E + FK+ +F D + Y R ++P DE K + V
Sbjct: 351 FFTFNDDKRPANRILQELIYVSFKEDTGKEFEDTRDKVYKYYTRGVDPTDEKKLKEKLVE 410
Query: 381 VNGQHIF 401
G IF
Sbjct: 411 FLGDFIF 417
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,925,649
Number of Sequences: 27780
Number of extensions: 209986
Number of successful extensions: 678
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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