Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C03f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130411-1|AAI30412.1| 1250|Homo sapiens REV1 homolog (S. cerevi...    48   3e-05
BC037734-1|AAH37734.1| 1114|Homo sapiens REV1 protein protein.         48   3e-05
AJ131720-1|CAB38231.1|  774|Homo sapiens alpha integrin binding ...    48   3e-05
AF357886-1|AAK43708.1| 1251|Homo sapiens terminal deoxycytidyl t...    48   3e-05
AF206019-1|AAF18986.1| 1251|Homo sapiens REV1 protein protein.         48   3e-05
AF151538-1|AAF06731.1| 1251|Homo sapiens deoxycytidyl transferas...    48   3e-05
AC018690-2|AAY24314.1| 1251|Homo sapiens unknown protein.              48   3e-05
AB047646-1|BAB21441.1| 1250|Homo sapiens Rev1S protein.                48   3e-05

>BC130411-1|AAI30412.1| 1250|Homo sapiens REV1 homolog (S.
           cerevisiae) protein.
          Length = 1250

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 754 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 803


>BC037734-1|AAH37734.1| 1114|Homo sapiens REV1 protein protein.
          Length = 1114

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 683 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 732


>AJ131720-1|CAB38231.1|  774|Homo sapiens alpha integrin binding
           protein 80 protein.
          Length = 774

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 278 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 327


>AF357886-1|AAK43708.1| 1251|Homo sapiens terminal deoxycytidyl
           transferase protein.
          Length = 1251

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 755 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 804


>AF206019-1|AAF18986.1| 1251|Homo sapiens REV1 protein protein.
          Length = 1251

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 755 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 804


>AF151538-1|AAF06731.1| 1251|Homo sapiens deoxycytidyl transferase
           protein.
          Length = 1251

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 755 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 804


>AC018690-2|AAY24314.1| 1251|Homo sapiens unknown protein.
          Length = 1251

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 755 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 804


>AB047646-1|BAB21441.1| 1250|Homo sapiens Rev1S protein.
          Length = 1250

 Score = 47.6 bits (108), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF 156
           +K+MVR   APVETAKF GHG C+ I ++  L  AT++ +++ +  + +F
Sbjct: 754 LKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMF 803


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,965,340
Number of Sequences: 237096
Number of extensions: 824004
Number of successful extensions: 1490
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)