Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-120|AAF47401.1|  995|Drosophila melanogaster CG12189-PA...    65   6e-11
AB049435-1|BAB15801.1|  995|Drosophila melanogaster dREV1 protein.     65   6e-11

>AE014296-120|AAF47401.1|  995|Drosophila melanogaster CG12189-PA
           protein.
          Length = 995

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEI 153
           +K+MVRA EAPVET+K+MGHG C++INKS+ +  AT+DV V+T   +++
Sbjct: 607 LKIMVRAAEAPVETSKYMGHGVCDIINKSSLIKYATDDVNVITTVVLDL 655


>AB049435-1|BAB15801.1|  995|Drosophila melanogaster dREV1 protein.
          Length = 995

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 27/49 (55%), Positives = 40/49 (81%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEI 153
           +K+MVRA EAPVET+K+MGHG C++INKS+ +  AT+DV V+T   +++
Sbjct: 607 LKIMVRAAEAPVETSKYMGHGVCDIINKSSLIKYATDDVNVITTVVLDL 655


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,231,520
Number of Sequences: 53049
Number of extensions: 239419
Number of successful extensions: 562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)