Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr...    55   4e-08
AC006762-6|ABJ99063.1|  547|Caenorhabditis elegans Hypothetical ...    28   3.5  
AC006762-5|AAF60553.2|  684|Caenorhabditis elegans Hypothetical ...    28   3.5  
U29380-12|AAR12986.1|  485|Caenorhabditis elegans Hypothetical p...    28   4.7  
U29380-11|AAR12987.1|  501|Caenorhabditis elegans Hypothetical p...    28   4.7  
AL023847-6|CAA19552.1|  297|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    27   8.1  
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
           protein ZK675.2 protein.
          Length = 1027

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = +1

Query: 7   VKLMVRAEEAPVETAKFMGHGYCNVINKSNNLPAATNDVEVLTQETIEIF*K 162
           +KLMVR+  AP++T+KFMGHG C+   K+ NL   T   E LT E ++++ K
Sbjct: 733 LKLMVRSANAPIQTSKFMGHGICDTFTKTCNLNVPTTRGESLTSEAMKLYAK 784


>AC006762-6|ABJ99063.1|  547|Caenorhabditis elegans Hypothetical
           protein Y42G9A.6b protein.
          Length = 547

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
 Frame = -3

Query: 309 VLDSLLIFMIVGLLQRNLLMA--PLLCCLIISTNF-VTCIP---TPLISLASTFI 163
           ++DS LI+M+VG+L +N+ ++   +  C+  + N  V  +P    P+++    FI
Sbjct: 399 IIDSFLIYMLVGILVQNIAISIGYMFSCIFGTVNLAVAVMPIFVVPMMAFGGFFI 453


>AC006762-5|AAF60553.2|  684|Caenorhabditis elegans Hypothetical
           protein Y42G9A.6a protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
 Frame = -3

Query: 309 VLDSLLIFMIVGLLQRNLLMA--PLLCCLIISTNF-VTCIP---TPLISLASTFI 163
           ++DS LI+M+VG+L +N+ ++   +  C+  + N  V  +P    P+++    FI
Sbjct: 536 IIDSFLIYMLVGILVQNIAISIGYMFSCIFGTVNLAVAVMPIFVVPMMAFGGFFI 590


>U29380-12|AAR12986.1|  485|Caenorhabditis elegans Hypothetical
           protein ZK546.2a protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +1

Query: 85  NKSNNLPAATNDVEVLTQETIE----IF*KNKCRC*RNERCWNTSNKI 216
           NK   LP  +  V + T E IE    IF    C+C   E C  T N+I
Sbjct: 97  NKLTELPDLSQCVSLKTVEAIENQFIIFPAGVCKCPNLETCLLTENRI 144


>U29380-11|AAR12987.1|  501|Caenorhabditis elegans Hypothetical
           protein ZK546.2c protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
 Frame = +1

Query: 85  NKSNNLPAATNDVEVLTQETIE----IF*KNKCRC*RNERCWNTSNKI 216
           NK   LP  +  V + T E IE    IF    C+C   E C  T N+I
Sbjct: 97  NKLTELPDLSQCVSLKTVEAIENQFIIFPAGVCKCPNLETCLLTENRI 144


>AL023847-6|CAA19552.1|  297|Caenorhabditis elegans Hypothetical
           protein Y57A10C.10 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 237 CCLIISTNFVTCIPTPLISLASTFIFLKYLNSF 139
           C +++S+ F   IP+ LISL  TF+     + F
Sbjct: 191 CGILLSSLFCLTIPSLLISLVETFVGFSIFDQF 223


>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 225 ISTNFVTCIPTPLISLASTFIFLKYLNSFL 136
           +  +F TC P  L+S A+   F KYL+  L
Sbjct: 121 VKNDFPTCTPEELVSKAAKESFEKYLHRML 150


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 225 ISTNFVTCIPTPLISLASTFIFLKYLNSFL 136
           +  +F TC P  L+S A+   F KYL+  L
Sbjct: 121 VKNDFPTCTPEELVSKAAKESFEKYLHRML 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,554,341
Number of Sequences: 27780
Number of extensions: 130615
Number of successful extensions: 395
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)