Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      25   0.41 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   0.71 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.2  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 76  TNVDHICYSLSCIPLPLPAYYLIG 5
           T V H+     C+P P+P++  IG
Sbjct: 44  TPVIHVLQYPGCVPKPIPSFACIG 67


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 222 NSAVSGFSFFKTSARWVPSMLDTKWT 145
           NSA+ G  FF  +  W P +++ KW+
Sbjct: 270 NSAIEGIIFFNLAKSW-PQLIE-KWS 293


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 404 WDWVGGRYSLWSAIGLSISLYIGH 475
           +D +GG YS WS     +  ++ H
Sbjct: 143 FDTLGGLYSTWSKKSKQVEYFLIH 166


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 404 WDWVGGRYSLWSAIGLSISLYIGH 475
           +D +GG YS WS     +  ++ H
Sbjct: 143 FDTLGGLYSTWSKKSKQVEYFLIH 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,223
Number of Sequences: 336
Number of extensions: 2229
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)