Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1040 + 8163654-8163704,8163814-8163935,8164011-8164092,816... 170 7e-43
03_06_0143 + 31962241-31962291,31962385-31962506,31962572-319626... 170 7e-43
09_04_0439 - 17594131-17594271,17595018-17595100,17595199-175953... 81 5e-16
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 73 1e-13
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564... 31 0.74
02_05_0749 + 31468643-31469086 29 2.3
01_01_0277 + 2274383-2274465,2274889-2274955,2275040-2275110,227... 29 2.3
09_05_0007 - 20036981-20037159,20037690-20037943,20038103-200383... 28 5.2
03_06_0388 + 33564096-33564485,33564642-33564812,33565125-335651... 28 5.2
03_06_0354 - 33333634-33333840,33334106-33334213,33335384-333355... 28 5.2
10_06_0057 + 10143578-10143804,10144072-10144147,10144360-10144899 27 6.9
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 27 9.1
08_02_1110 + 24371934-24374763,24375034-24375518 27 9.1
03_05_0164 - 21432289-21432355,21433612-21433699,21433859-214339... 27 9.1
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 27 9.1
>06_01_1040 +
8163654-8163704,8163814-8163935,8164011-8164092,
8164166-8164213,8164516-8164671,8164747-8164843,
8164942-8164984,8165375-8165442,8165533-8165617,
8165698-8165746,8165968-8166040,8166119-8166179,
8167114-8167180,8167400-8167453,8167537-8167665,
8168192-8168255,8168366-8168439,8168523-8168576,
8168696-8168764,8169394-8169483,8169656-8169763,
8169876-8169923
Length = 563
Score = 170 bits (413), Expect = 7e-43
Identities = 87/180 (48%), Positives = 117/180 (65%), Gaps = 7/180 (3%)
Frame = +2
Query: 2 FSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKP------YANHLKVHFVSN 163
FS+ SG W G TGKA+T+V+++GIGGS LGPL V AL+ A ++ F++N
Sbjct: 144 FSETFRSGSWVGATGKALTNVVSVGIGGSFLGPLFVHAALQTDPEAAESAKGRQLRFLAN 203
Query: 164 IDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWFLESAKDPSAVARHFVAL 343
+D +A +K L+PET L ++ SKTFTT ET+ NA + K W + S P AVA+H +A+
Sbjct: 204 VDPVDVARSIKDLDPETTLVVVVSKTFTTAETMLNARTLKEWIVSSL-GPDAVAKHMIAV 262
Query: 344 STNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIG-LSISLYIGHENFEKLLDGANFMDQ 520
STN E V FGID N F FWDWVGGRYS+ SA+G L +SL G +K L+GA +D+
Sbjct: 263 STNLELVEKFGIDPKNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFPIVQKFLEGAASIDK 322
>03_06_0143 +
31962241-31962291,31962385-31962506,31962572-31962671,
31962775-31962822,31963096-31963251,31963330-31963426,
31963525-31963567,31963970-31964037,31964139-31964223,
31964297-31964345,31964566-31964638,31964708-31964768,
31965417-31965483,31965709-31965762,31965854-31965982,
31966485-31966548,31966655-31966728,31966793-31966867,
31966972-31967040,31967759-31967848,31968014-31968121,
31968251-31968298
Length = 576
Score = 170 bits (413), Expect = 7e-43
Identities = 87/180 (48%), Positives = 117/180 (65%), Gaps = 7/180 (3%)
Frame = +2
Query: 2 FSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKP------YANHLKVHFVSN 163
FS+ SG W G TGKA+T+V+++GIGGS LGPL V AL+ A ++ F++N
Sbjct: 150 FSETFRSGSWVGATGKALTNVVSVGIGGSFLGPLFVHAALQTDPEAAESAKGRQLRFLAN 209
Query: 164 IDGTHLAEVLKKLNPETALFIIASKTFTTQETITNASSAKTWFLESAKDPSAVARHFVAL 343
+D +A +K L+PET L ++ SKTFTT ET+ NA + K W + S P AVA+H +A+
Sbjct: 210 VDPVDVARSIKDLDPETTLVVVVSKTFTTAETMLNARTLKEWIVSSL-GPDAVAKHMIAV 268
Query: 344 STNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIG-LSISLYIGHENFEKLLDGANFMDQ 520
STN E V FGID N F FWDWVGGRYS+ SA+G L +SL G +K L+GA +D+
Sbjct: 269 STNLELVEKFGIDPKNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFPIVQKFLEGAASIDK 328
>09_04_0439 -
17594131-17594271,17595018-17595100,17595199-17595355,
17595438-17595576,17595668-17595720,17596150-17596257,
17596345-17596413,17596505-17596570,17596651-17596794,
17597372-17597455,17597539-17597637,17597753-17597875,
17598283-17598831
Length = 604
Score = 81.0 bits (191), Expect = 5e-16
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Frame = +2
Query: 2 FSDQVVSGQWKGYTGKA--ITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGT 175
FS VVSG+ K + A T +++IGIGGS LGP V+EAL P LK+ F+ N D
Sbjct: 175 FSQDVVSGKIKPPSSPAGRFTQILSIGIGGSALGPQFVSEALAPDNPPLKIRFIDNTDPA 234
Query: 176 HLAEVLKKLNPETA--LFIIASKTFTTQETITNASSAKTWF----LESAKDPSAVARHFV 337
+ + +L PE A L I+ SK+ T ET + F L+ +K AV +
Sbjct: 235 GIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFRDAGLDFSKQGVAVTQE-N 293
Query: 338 ALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGHENFEKLLDGANFMD 517
+L N ++ + F +DWVGGR S SA+GL + G + +++L GA MD
Sbjct: 294 SLLDNTARIEGW----LARFPMFDWVGGRTSEMSAVGLLPAALQGID-IKEMLVGAALMD 348
Query: 518 Q 520
+
Sbjct: 349 E 349
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 73.3 bits (172), Expect = 1e-13
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Frame = +2
Query: 2 FSDQVVSGQWKGYTGKA--ITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGT 175
F+ V+S + + + A T +++IGIGGS LGP V EAL P L + F+ N D
Sbjct: 174 FASDVISAKIRPPSSPAGRFTQILSIGIGGSSLGPQFVAEALAPDNPPLMIRFIDNTDPA 233
Query: 176 HLAEVLKKLNPETA--LFIIASKTFTTQETITNASSAKTWF----LESAKDPSAVARHFV 337
+ + +L PE A L I+ SK+ T ET + F LE +K A+ +
Sbjct: 234 GIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFRDAGLEFSKQGVAITQE-N 292
Query: 338 ALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGHENFEKLLDGANFMD 517
+L N ++ + F +DWVGGR S SA+GL + G + +++L GA MD
Sbjct: 293 SLLDNTARIEGW----LARFPMFDWVGGRTSEMSAVGLLPAALQGID-IKEMLVGAAQMD 347
Query: 518 Q 520
+
Sbjct: 348 E 348
>03_04_0044 +
16754638-16754676,16755472-16755598,16756325-16756451,
16756866-16757431,16757896-16758211,16758373-16758613,
16758734-16758823,16759343-16759780,16759877-16760185,
16760392-16760406
Length = 755
Score = 30.7 bits (66), Expect = 0.74
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 477 SCPMYSEMDRPIADHSEYLPPTQSQKP 397
S P Y+ M +P++ H+ YLPP P
Sbjct: 667 STPFYNMMGQPMSPHTAYLPPHNGHAP 693
>02_05_0749 + 31468643-31469086
Length = 147
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 302 AKDPSAVARHFVALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGHEN 481
A D A AR + AE+V + G++ W W GGR W + L +G
Sbjct: 68 ADDVEAAARRD---AMEAEEVCSHGMEGRAARWGWGWKGGRRDGWMDGDAACGLSLGFSG 124
Query: 482 FEKLLD 499
LLD
Sbjct: 125 VLGLLD 130
>01_01_0277 +
2274383-2274465,2274889-2274955,2275040-2275110,
2275550-2275667,2275755-2275828,2276094-2276149,
2276237-2276320,2276422-2276509,2276602-2276679,
2276814-2276870,2277074-2277578
Length = 426
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 480 FSCPMYSEMDRPIADHSEYLPPTQSQKPNMLLASIPNAVTFSA 352
F CPMY ++ +A + KP+++ AS P + F A
Sbjct: 75 FPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSPGIMVFGA 117
>09_05_0007 -
20036981-20037159,20037690-20037943,20038103-20038355,
20038447-20038640,20039122-20039252,20039378-20039488,
20039834-20039932
Length = 406
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 116 ALKPYANHLKVHFVSNIDGTHLAEVLKK-LNPETALFIIASKTFTTQETITNASSAKTWF 292
A++P+ L V + G+ LA +K L+P ++ F T I A TWF
Sbjct: 271 AIQPFLPPLSVFVTALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFIAGYHLAGTWF 330
Query: 293 LESAKDPSAVAR 328
ESA D A+ R
Sbjct: 331 RESA-DVKALQR 341
>03_06_0388 +
33564096-33564485,33564642-33564812,33565125-33565145,
33565260-33565467,33566156-33566346,33566465-33566584,
33566703-33566936
Length = 444
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 396 NMLLASIPNAVTFSA-FVDKATKCLATAEGSLADSRNHVLAELAFVIVSCVVNVLDAMMN 220
NM++ S+ N + + D A KC T EGS + N V +A +S L+ N
Sbjct: 340 NMVMNSVKNPIIIDQNYCDSAKKC-ETQEGSAVEISNVVFKNIAGTTISKSAITLNCSKN 398
>03_06_0354 -
33333634-33333840,33334106-33334213,33335384-33335557,
33335637-33335765,33335858-33336145,33336257-33336489,
33336607-33337435
Length = 655
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 281 KTWFLESAKDPSAVARHFVALSTNAE 358
KTW + K + VAR FVAL++ E
Sbjct: 430 KTWMSAAQKSSNVVARFFVALNSRKE 455
>10_06_0057 + 10143578-10143804,10144072-10144147,10144360-10144899
Length = 280
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 451 QTDRGPQRISAPDPVPEAEHVVSVDTERGDLLGVRR*SDEVSRHRRGILSGFQEPR 284
+ + G + PD VP VS++T RG+ RR + H+ +S F+E R
Sbjct: 58 EDEHGVGGVPDPDAVPRGRFKVSIETRRGNKPQFRRLRLRL-LHQGRKMSSFKEER 112
>10_08_0509 + 18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 152 FVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNAS 274
F+S+ + THL + +KLNP+ +L T E ++ S
Sbjct: 979 FLSDDNKTHLLNMSRKLNPKRSLLSFVGVIINTIELLSALS 1019
>08_02_1110 + 24371934-24374763,24375034-24375518
Length = 1104
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 26 QWKGYTGKAITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKK 199
+W G + A DV+ + I DLG + ++ P A LK +S GT+L + K
Sbjct: 67 RWLGVSCDARGDVVAVTIKTVDLGGALPAASVLPLARSLKTLVLS---GTNLTGAIPK 121
>03_05_0164 -
21432289-21432355,21433612-21433699,21433859-21433954,
21434284-21434563
Length = 176
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 448 TDRGPQRISAPDPVPEAEHVVSVDTERGDLLGVRR*SDEVSRHRRG 311
T R PQR +P P+P + ++ +D E L R + V + RRG
Sbjct: 34 TTRIPQRRPSPAPLPCTQALLDLDREPSSLDQSLRLTAVVGQWRRG 79
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 439 GPQRISAPDPVPEAEHVVSVDTERGDLLG 353
GP+ P P P EH++ VD G+++G
Sbjct: 71 GPEE-RLPHPKPPTEHLICVDWRLGEVVG 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,136,909
Number of Sequences: 37544
Number of extensions: 275782
Number of successful extensions: 1043
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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