Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19976| Best HMM Match : PGI (HMM E-Value=0) 244 3e-65
SB_37337| Best HMM Match : PGI (HMM E-Value=0) 163 1e-40
SB_28287| Best HMM Match : DUF202 (HMM E-Value=1.8) 33 0.19
SB_25545| Best HMM Match : ABC_tran (HMM E-Value=0.00042) 31 0.76
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.76
SB_1228| Best HMM Match : PKD_channel (HMM E-Value=0) 29 2.3
SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8) 29 2.3
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 28 5.4
SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07) 27 7.1
SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 27 7.1
SB_59184| Best HMM Match : Glyco_transf_17 (HMM E-Value=1.6e-11) 27 9.4
SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40) 27 9.4
>SB_19976| Best HMM Match : PGI (HMM E-Value=0)
Length = 664
Score = 244 bits (598), Expect = 3e-65
Identities = 111/173 (64%), Positives = 137/173 (79%)
Frame = +2
Query: 2 FSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHL 181
F++ +VSG KGYT K TDV+NIGIGGSDLGP M+ E L+ Y NHL +HFVSN+DG H+
Sbjct: 103 FTNDIVSGIRKGYTNKPFTDVVNIGIGGSDLGPAMIVEGLEYYKNHLNLHFVSNVDGDHV 162
Query: 182 AEVLKKLNPETALFIIASKTFTTQETITNASSAKTWFLESAKDPSAVARHFVALSTNAEK 361
E+LKK+NPET LF+I SKTFTTQET++NA + + WFL+SA + VA+HFVA+STN +
Sbjct: 163 NEILKKINPETTLFVIVSKTFTTQETLSNAQTIREWFLKSA-NIDDVAKHFVAVSTNVKN 221
Query: 362 VTAFGIDANNMFGFWDWVGGRYSLWSAIGLSISLYIGHENFEKLLDGANFMDQ 520
VT FGI N+F WDWVGGR+SLWSA+GLSISL +G ENF KLL GAN MD+
Sbjct: 222 VTEFGIAEENIFPMWDWVGGRFSLWSAVGLSISLSVGFENFNKLLKGANEMDK 274
>SB_37337| Best HMM Match : PGI (HMM E-Value=0)
Length = 391
Score = 163 bits (395), Expect = 1e-40
Identities = 80/112 (71%), Positives = 90/112 (80%), Gaps = 1/112 (0%)
Frame = +2
Query: 77 IGGSDLGPLMVTEALKPYANH-LKVHFVSNIDGTHLAEVLKKLNPETALFIIASKTFTTQ 253
+ G D GPLMVTEAL+PY L VHFVSNIDGTHLA+ L +LNPET+LFIIASKTFTT
Sbjct: 102 VDGKD-GPLMVTEALQPYGKKGLNVHFVSNIDGTHLAKTLAELNPETSLFIIASKTFTTI 160
Query: 254 ETITNASSAKTWFLESAKDPSAVARHFVALSTNAEKVTAFGIDANNMFGFWD 409
ETITNA+SA+ W L+ KD SAVA+HFVALSTN KVT FGI +NMF FWD
Sbjct: 161 ETITNATSARKWLLDHLKDKSAVAKHFVALSTNEPKVTEFGISKDNMFAFWD 212
>SB_28287| Best HMM Match : DUF202 (HMM E-Value=1.8)
Length = 206
Score = 32.7 bits (71), Expect = 0.19
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 401 FWDWVGGRYSLWSAIGLSISLYIGHENFE 487
FW+WV Y+ W+ + S S + HE+ +
Sbjct: 158 FWEWVRENYAFWTKLDASSSFTLSHEHLD 186
>SB_25545| Best HMM Match : ABC_tran (HMM E-Value=0.00042)
Length = 146
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = -3
Query: 393 MLLASIPNAVTFSAFVDKATKCLATAEGSLADSRNHVLAELAFVI--VSCVVNVLDAMMN 220
+ L ++PN V FV + + ++ + +S + ++ L+FV+ +S VVN L ++
Sbjct: 15 LALPTLPNVVNLLPFVVNSLSFVVSSLSFVVNSLSFIVNSLSFVVSSLSFVVNSLSFVV- 73
Query: 219 SAVSGFSFFK 190
S++S +SF K
Sbjct: 74 SSLSFWSFLK 83
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = -3
Query: 393 MLLASIPNAVTFSAFVDKATKCLATAEGSLADSRNHVLAELAFVI--VSCVVNVLDAMMN 220
+ L ++PN V FV + + ++ + +S + ++ L+FV+ +S VVN L ++
Sbjct: 360 LALPTLPNVVNLLPFVVNSLSFVVSSLSFVVNSLSFIVNSLSFVVSSLSFVVNSLSFVV- 418
Query: 219 SAVSGFSFFK 190
S++S +SF K
Sbjct: 419 SSLSFWSFLK 428
>SB_1228| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1157
Score = 29.1 bits (62), Expect = 2.3
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Frame = -3
Query: 510 KLAPSRSFSKFSCPMYSEMDRPIADHSEYL-----PP----TQSQKPNMLLASIPNAVTF 358
K+A + S F YS + R + D +L PP T++Q+ + L+ + A+
Sbjct: 210 KVASKKELSSFKYQFYSRLSRNLGDGHLWLSVVTRPPHSPFTRAQRLSCCLSVLYCAMVA 269
Query: 357 SA----FVDKATKCLATAEGSLADSRNHVLAELAFVIVSCVVNVL 235
SA F DK GSL S ++ L IV VNVL
Sbjct: 270 SAMFYQFGDKTNSTKTLKVGSLRLSLRQLVIGLQSAIVVVPVNVL 314
>SB_22715| Best HMM Match : SAM_PNT (HMM E-Value=1.8)
Length = 996
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/76 (34%), Positives = 33/76 (43%)
Frame = +2
Query: 188 VLKKLNPETALFIIASKTFTTQETITNASSAKTWFLESAKDPSAVARHFVALSTNAEKVT 367
VLK L+P + T + +I +SA F SAV R + STN E
Sbjct: 198 VLKALHPIKNGEVYRMVTPLLRPSILGPTSAIVHFPNPGNLTSAVRRKKILYSTNKEIPV 257
Query: 368 AFGIDANNMFGFWDWV 415
GI AN GF DW+
Sbjct: 258 NIGIPAN--MGF-DWL 270
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 350 NAEKVTAFGIDANNMFGFWDWVGGRY 427
N FG+ NN GF DW G Y
Sbjct: 449 NCNTSCPFGMGYNNSLGFCDWCPGNY 474
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Frame = -2
Query: 244 ERLGCYDEQ---RCLRVQLLQDLGQ-VGAVDVR 158
ERLGC+D++ CLR + +D + VG VD R
Sbjct: 198 ERLGCFDKENLLNCLREKPFEDFERAVGGVDPR 230
>SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07)
Length = 592
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 253 LCGE-RLGCYDEQRCLRVQLLQDLGQVGAVDVRYEMDLKMISI 128
+CG+ +L C+D+ L L LG V D R+EM +K +I
Sbjct: 257 MCGKLKLFCFDKTGTLTEDGLDLLGVVRVEDARFEMIVKDATI 299
>SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16)
Length = 432
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 FVALSTNAEKVTAFGIDANNMFGFWDWVGGRYSLWSAIGLSI--SLYIG 472
++A+ +V +G+ ++ V RYS+W +G+ I L++G
Sbjct: 188 WLAMRIGGTRVFGYGVFVTSLLALLTPVATRYSVWGLVGVRIFQGLFLG 236
>SB_59184| Best HMM Match : Glyco_transf_17 (HMM E-Value=1.6e-11)
Length = 268
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 436 PQRISAPDPVPEAEHVVS 383
P+ I+ PDPVP + HV S
Sbjct: 11 PRSITLPDPVPMSHHVTS 28
>SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40)
Length = 440
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 444 IADHSEYLPPTQSQKPNMLLASIPNAVTFSAFVDKATKCLATAEGSLADSRNH-VLAELA 268
+ +HS ++ T + P + + S+P A+ F A L E SL++ N+ + L+
Sbjct: 207 VYNHSTWVITTSNILPQVNIESVPIALAIVVFSYSAHASLPGLEASLSNRTNYNAILGLS 266
Query: 267 FVIVSCVVNVL 235
+ + SC + ++
Sbjct: 267 YSL-SCFIKLV 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,517,532
Number of Sequences: 59808
Number of extensions: 283177
Number of successful extensions: 960
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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