Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    27   0.15 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    27   0.15 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    27   0.15 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    27   0.15 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    27   0.15 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    26   0.20 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   2.5  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   3.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   3.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   3.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   3.3  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   7.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   7.7  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   +CY+++ I   P+P+P YY
Sbjct: 96  NNNYKQLCYNINYIEQIPVPVPVYY 120


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   +CY+++ I   P+P+P YY
Sbjct: 96  NNNYKQLCYNINYIEQIPVPVPVYY 120


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   +CY+++ I   P+P+P YY
Sbjct: 96  NNNYKQLCYNINYIEQIPVPVPVYY 120


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   +CY+++ I   P+P+P YY
Sbjct: 96  NNNYKQLCYNINYIEQIPVPVPVYY 120


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   +CY+++ I   P+P+P YY
Sbjct: 96  NNNYKQLCYNINYIEQIPVPVPVYY 120


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   +CY+++ I   P+P+P YY
Sbjct: 96  NNNYKQLCYNINHIEQIPVPVPVYY 120


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
          protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 76 TNVDHICYSLSCIPLPLPAY 17
          T V H      C+P P+P+Y
Sbjct: 32 TPVIHFLQYPGCVPKPIPSY 51


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   + Y+++ I   P+P+P YY
Sbjct: 101 NNNCKKLYYNINYIEQIPIPVPVYY 125


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   + Y+++ I   P+P+P YY
Sbjct: 106 NNNCKKLYYNINYIEQIPIPVPVYY 130


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   + Y+++ I   P+P+P YY
Sbjct: 106 NNNCKKLYYNINYIEQIPIPVPVYY 130


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -2

Query: 79  NTNVDHICYSLSCI---PLPLPAYY 14
           N N   + Y+++ I   P+P+P YY
Sbjct: 106 NNNCKKLYYNINYIEQIPIPVPVYY 130


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 73  NVDHICYSLSCIPLPLPAYY 14
           N+++I      +P+P+P YY
Sbjct: 104 NINYIEQIPVPVPIPVPVYY 123


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 40  IPLPLPAYY 14
           IP+P+P YY
Sbjct: 118 IPIPVPVYY 126


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 40  IPLPLPAYY 14
           IP+P+P YY
Sbjct: 118 IPIPVPVYY 126


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 40  IPLPLPAYY 14
           IP+P+P YY
Sbjct: 118 IPIPVPVYY 126


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 40  IPLPLPAYY 14
           IP+P+P YY
Sbjct: 118 IPIPVPVYY 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,822
Number of Sequences: 438
Number of extensions: 2335
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)