Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C01f
         (521 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g50580.1 68416.m05532 proline-rich family protein contains pr...    30   0.82 
At4g28720.1 68417.m04108 flavin-containing monooxygenase family ...    28   3.3  
At3g47560.2 68416.m05178 esterase/lipase/thioesterase family pro...    27   5.8  

>At3g50580.1 68416.m05532 proline-rich family protein contains
           proline-rich extensin domains, INTERPRO:IPR002965
          Length = 265

 Score = 30.3 bits (65), Expect = 0.82
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 155 LKYTCDSCDLCIKSY 199
           ++YTC SCD+C +SY
Sbjct: 242 VRYTCHSCDICCRSY 256


>At4g28720.1 68417.m04108 flavin-containing monooxygenase family
           protein / FMO family protein similar to
           flavin-containing monooxygenases YUCCA [gi:16555352],
           YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
           Arabidopsis thaliana
          Length = 426

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 437 DLHPR--EDISSLIFDSTSILWCFRFLTKDEGSTYTLLYSCDYKLLYPK*NVSEFMP 273
           +++P+  E + +  FD TS LW  + ++K E +   + Y C + ++    N    MP
Sbjct: 110 EINPKFNECVQTARFDETSGLWRVKTVSKSESTQTEVEYICRWLVVATGENAERVMP 166


>At3g47560.2 68416.m05178 esterase/lipase/thioesterase family
           protein low similarity to cinnamoyl ester hydrolase CinI
           [Butyrivibrio fibrisolvens] GI:1622732; contains
           Interpro entry IPR000379
          Length = 318

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 416 ISSLIFDSTSILWCFRFLTKDEGSTY 339
           ++ L+F  T  LWCF    + EGS Y
Sbjct: 82  LNKLVFVLTLGLWCFHSFRESEGSFY 107


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,588,718
Number of Sequences: 28952
Number of extensions: 177168
Number of successful extensions: 392
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)