Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B12f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41900 Cluster: Transcription initiation factor IIF sub... 127 1e-28
UniRef50_P13984 Cluster: Transcription initiation factor IIF sub... 72 7e-12
UniRef50_UPI000155C9E9 Cluster: PREDICTED: similar to General tr... 70 4e-11
UniRef50_Q4SEL4 Cluster: Chromosome 10 SCAF14616, whole genome s... 58 1e-07
UniRef50_UPI0000584805 Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_A7SIX2 Cluster: Predicted protein; n=1; Nematostella ve... 50 4e-05
UniRef50_A3LMY9 Cluster: Predicted protein; n=5; Saccharomycetal... 48 2e-04
UniRef50_Q6C1J3 Cluster: Similar to sp|P41896 Saccharomyces cere... 46 7e-04
UniRef50_O94424 Cluster: Transcription initiation factor IIF sub... 44 0.002
UniRef50_Q5C1Z0 Cluster: SJCHGC05520 protein; n=1; Schistosoma j... 44 0.003
UniRef50_Q8MYM8 Cluster: Putative uncharacterized protein; n=2; ... 43 0.004
UniRef50_A7TK98 Cluster: Putative uncharacterized protein; n=1; ... 43 0.004
UniRef50_Q54KT7 Cluster: TFIIF subunit; n=1; Dictyostelium disco... 42 0.011
UniRef50_A6S4K4 Cluster: Putative uncharacterized protein; n=2; ... 42 0.011
UniRef50_P41896 Cluster: Transcription initiation factor IIF sub... 42 0.011
UniRef50_A4RMG8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.080
UniRef50_A1BJN2 Cluster: Polysaccharide biosynthesis protein; n=... 36 0.43
UniRef50_A7PDM7 Cluster: Chromosome chr17 scaffold_12, whole gen... 36 0.56
UniRef50_Q8SSF8 Cluster: TRANSCRIPTION INITIATION FACTOR TFIIF B... 36 0.74
UniRef50_Q1DLV0 Cluster: Putative uncharacterized protein; n=3; ... 33 4.0
UniRef50_Q4SHV0 Cluster: Chromosome 5 SCAF14581, whole genome sh... 33 5.2
UniRef50_Q17PC8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_UPI0001555759 Cluster: PREDICTED: similar to glibenclam... 32 9.2
UniRef50_Q015B9 Cluster: Dna topoisomerase ii binding protein 1;... 32 9.2
>UniRef50_P41900 Cluster: Transcription initiation factor IIF
subunit beta; n=7; Endopterygota|Rep: Transcription
initiation factor IIF subunit beta - Drosophila
melanogaster (Fruit fly)
Length = 277
Score = 127 bits (307), Expect = 1e-28
Identities = 62/90 (68%), Positives = 74/90 (82%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEAVLCLK 359
+LDLSN GRGVWLVKVPKYIA KWEKAP N++VGKL+I++ PG +A+V LSL+ AVL L
Sbjct: 15 DLDLSNAGRGVWLVKVPKYIAQKWEKAPTNMDVGKLRINKTPGQKAQVSLSLTPAVLAL- 73
Query: 360 DPGEQSIPKEHKLDVSNVNTQSLGVFSHIA 449
DP E+ IP EH LDVS V Q+LGVFSH+A
Sbjct: 74 DP-EEKIPTEHILDVSQVTKQTLGVFSHMA 102
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +1
Query: 451 IDYQERKKAEGKKARDDKEAVLN 519
I+Y+ERKKAEGKKARDDK AV++
Sbjct: 180 IEYRERKKAEGKKARDDKNAVMD 202
>UniRef50_P13984 Cluster: Transcription initiation factor IIF
subunit beta; n=38; Euteleostomi|Rep: Transcription
initiation factor IIF subunit beta - Homo sapiens
(Human)
Length = 249
Score = 72.1 bits (169), Expect = 7e-12
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Frame = +3
Query: 180 ELDLSNTGR--GVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEAVLC 353
ELDL+ + GVWLVKVPKY++ +W KA G EVGKL+I++ G R +V +L+E +
Sbjct: 6 ELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQG-RTEVSFTLNEDLAN 64
Query: 354 LKD----PGEQSIPKEHKLDVSNVNTQSLGVFS 440
+ D P S P+EH + +V Q+L VF+
Sbjct: 65 IHDIGGKPASVSAPREHPFVLQSVGGQTLTVFT 97
>UniRef50_UPI000155C9E9 Cluster: PREDICTED: similar to General
transcription factor IIF, polypeptide 2; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
General transcription factor IIF, polypeptide 2 -
Ornithorhynchus anatinus
Length = 287
Score = 69.7 bits (163), Expect = 4e-11
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Frame = +3
Query: 174 MTELDLSNTGR--GVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEAV 347
M +LDL+ + GVWLVKVPKY++ +W KA G EVGKL+I++ G + +V +L+E +
Sbjct: 1 MADLDLTGAKQNTGVWLVKVPKYLSQQWAKASGKGEVGKLRIAKSQG-KTEVSFTLNEEL 59
Query: 348 LCLKD----PGEQSIPKEHKLDVSNVNTQSLGVFS 440
+ D P P+EH + +V Q+L VF+
Sbjct: 60 ASIHDIGGKPASVRAPREHPFLLQSVGGQTLTVFT 94
>UniRef50_Q4SEL4 Cluster: Chromosome 10 SCAF14616, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 10 SCAF14616, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 369
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +3
Query: 177 TELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGT-RAKVQLSLSEAVLC 353
T++DL+ + VWLVKVP Y++ +W+KA G EVGK++ ++ A+V +L++
Sbjct: 4 TKVDLTAAKQNVWLVKVPNYLSLQWQKAAGAGEVGKVRFAKKGNQGMAEVSFTLNKEQAM 63
Query: 354 LKDPGEQ--SIPKEHKLDVSNVNTQSLGVFS 440
+ Q S+P++H + + Q+L VF+
Sbjct: 64 TEGLDNQPFSVPRQHTFSMQPMGGQTLAVFT 94
>UniRef50_UPI0000584805 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 545
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 207 GVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEAVLCLK-DPGEQSIP 383
GV + VPKY+A +WEK+ N +GK+++ + G + + L + E V K P + IP
Sbjct: 361 GVDVFWVPKYVAQRWEKSDKNGHIGKIRVGKKFG-KPDISLVMDERVAKTKLTPDDPDIP 419
Query: 384 KEHKLDVSNVNTQSLGVFS 440
EHKL V + ++ V+S
Sbjct: 420 VEHKLQVMSALPGTMMVYS 438
>UniRef50_A7SIX2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 249
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKW-EKAPGNIEVGKLKISR 299
ELD + GR VWLVKVPKY++N W EKA + VG LKI++
Sbjct: 4 ELDCNGAGRDVWLVKVPKYLSNLWMEKADPSGIVGTLKINK 44
>UniRef50_A3LMY9 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 402
Score = 47.6 bits (108), Expect = 2e-04
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAP--GNIEVGKLKISR-VPGTRAKVQLSLSEAVL 350
+++L+N + +WLVK+P+Y+A KW K ++G +KI + G K+Q+ L +
Sbjct: 63 DMNLTNGDQKIWLVKLPRYLAEKWAKTENLNGSQLGTVKIKKNSGGNGGKLQVKL----V 118
Query: 351 CLKDPGE-QSIPKEHKLDVSNVNTQSLGVFS 440
KD E + IP+E+ + + N ++ VFS
Sbjct: 119 INKDLEESKGIPQEYDISMLNTQVRNSYVFS 149
>UniRef50_Q6C1J3 Cluster: Similar to sp|P41896 Saccharomyces
cerevisiae YGR005c TFG2 TFIIF subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P41896 Saccharomyces
cerevisiae YGR005c TFG2 TFIIF subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 366
Score = 45.6 bits (103), Expect = 7e-04
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAP--GNIEVGK--LKISRVPGTRAKVQLSLSEAV 347
+LD + VWLV++PK++ +KW N +G+ +K + PG + KV L LS+
Sbjct: 58 DLDTAGLENRVWLVRLPKFLVDKWSHLDEHTNKRLGQVLIKENTAPGEKQKVSLRLSDT- 116
Query: 348 LCLKDPGEQSIPKEHKLDVSNVNTQSLGVFSHIAH*LPRKEEG*REKGS 494
P IP E++LD+ + VF+ KE+ E GS
Sbjct: 117 -----PENSEIPHEYELDIVKEVVNNTFVFTEKEQ-KKEKEKEKEEAGS 159
>UniRef50_O94424 Cluster: Transcription initiation factor IIF
subunit beta; n=1; Schizosaccharomyces pombe|Rep:
Transcription initiation factor IIF subunit beta -
Schizosaccharomyces pombe (Fission yeast)
Length = 307
Score = 44.0 bits (99), Expect = 0.002
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +3
Query: 162 YSTTMTELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSE 341
Y +LDL G VWLVK+PK++ +KW P + + L RV ++QL L
Sbjct: 16 YEDDAGDLDLGQIGSRVWLVKIPKFLMDKWNSIPED-DAANLGCVRVKND--EIQLLLQN 72
Query: 342 AVLCLKDPGEQSIPKEHKLDVSNVNTQSLGVF 437
+ P +PK + L V N ++ VF
Sbjct: 73 S------PENADVPKIYNLRVMNKFVRNSYVF 98
>UniRef50_Q5C1Z0 Cluster: SJCHGC05520 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05520 protein - Schistosoma
japonicum (Blood fluke)
Length = 322
Score = 43.6 bits (98), Expect = 0.003
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +3
Query: 183 LDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKL------KISRVPGTRAKVQLSLSEA 344
+D S GVWLVKVPKY+A W A + VGK+ +SR Q++L
Sbjct: 15 VDTSRAKDGVWLVKVPKYLAELWHNAGPDGVVGKVVIASSSNVSRNGNKGPGSQVTLVTD 74
Query: 345 VLCLKDPGEQS--IPKEHK 395
L GE IPKEH+
Sbjct: 75 SELLNQSGESGNLIPKEHQ 93
>UniRef50_Q8MYM8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 263
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKI-SRVPGTRAKVQL------SLS 338
++D R +WLVKVP+Y++ W+ GN+ VGKL+I ++V AK +
Sbjct: 10 DVDCELAKRSIWLVKVPRYLSELWDANEGNV-VGKLQIGAQVELHTAKGLIHPKPKEPTE 68
Query: 339 EAVLCLKDPGEQSIPKEHKLDVSNVNTQSLGVFS 440
+ + P IP E+ + +V +Q++ V S
Sbjct: 69 GSSSTVTQPEASEIPTEYSFILHDVKSQTMSVLS 102
>UniRef50_A7TK98 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 408
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPG--NIEVGKLKISRVPGTRAKVQLSLSEAVLC 353
+LDLS+ R VWLV++P ++A KW E+GK+KI++ G++ K L
Sbjct: 49 DLDLSSCSRQVWLVRLPMFLAEKWRDRSNLHGQELGKIKINQ-NGSKIK---------LV 98
Query: 354 LKDPGEQSIPKEHKLDVSNVNTQSLGVFS 440
L + +IP E+ L+++ ++ +F+
Sbjct: 99 LNENDNDAIPHEYDLELTKKVVENEYIFT 127
>UniRef50_Q54KT7 Cluster: TFIIF subunit; n=1; Dictyostelium
discoideum AX4|Rep: TFIIF subunit - Dictyostelium
discoideum AX4
Length = 248
Score = 41.5 bits (93), Expect = 0.011
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAK-VQLSLS 338
E++ N VWL+KVPK+++ W+K G E+G++ I R K +++SLS
Sbjct: 12 EVNTDNADNQVWLIKVPKFLSESWQKI-GQGEIGQIHIKGGDNYRYKYIKISLS 64
>UniRef50_A6S4K4 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 364
Score = 41.5 bits (93), Expect = 0.011
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +3
Query: 210 VWLVKVPKYIANKW----EKAPGNIEVGKLKISRVPGTRAKVQLSLSEAVLCLKDPGEQS 377
+WL +VPKY+ + W E I++G ++ R V+ S S +L Q+
Sbjct: 43 LWLGRVPKYVWDAWNGMSEDLDEEIQIGTIRNCRERMPDGTVKDSYS-MLLNSNLAQHQT 101
Query: 378 IPKEHKLDVSNVNTQSLGVFS 440
+PKE+ LD++N N ++ VFS
Sbjct: 102 VPKEYNLDITNSNVKNTFVFS 122
>UniRef50_P41896 Cluster: Transcription initiation factor IIF
subunit beta; n=5; Saccharomycetales|Rep: Transcription
initiation factor IIF subunit beta - Saccharomyces
cerevisiae (Baker's yeast)
Length = 400
Score = 41.5 bits (93), Expect = 0.011
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPG--NIEVGKLKISRVPGTRAKVQLSLSEAVLC 353
+LDL + R VWLV++P ++A KW E+GK++I++ S+ L
Sbjct: 58 DLDLERSNRQVWLVRLPMFLAEKWRDRNNLHGQELGKIRINK----------DGSKITLL 107
Query: 354 LKDPGEQSIPKEHKLDVSNVNTQSLGVFS 440
L + SIP E+ L+++ ++ VF+
Sbjct: 108 LNENDNDSIPHEYDLELTKKVVENEYVFT 136
>UniRef50_A4RMG8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 394
Score = 38.7 bits (86), Expect = 0.080
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 210 VWLVKVPKYIANKWEKAP--GNIEVGKLKISRVPGTRAKVQLSLSEAVLCLKDPGEQSIP 383
++L +VP Y+ W + P NI+VGK++ P + + + L +L Q IP
Sbjct: 43 MYLARVPHYVWEAWAELPDDANIQVGKIRQWYEPDAKGEQHIKL-RMLLDNGIGAHQMIP 101
Query: 384 KEHKLDVSNVNTQSLGVFS 440
KE+ L ++ + + +FS
Sbjct: 102 KEYDLRITEMTVKDTFIFS 120
>UniRef50_A1BJN2 Cluster: Polysaccharide biosynthesis protein; n=1;
Chlorobium phaeobacteroides DSM 266|Rep: Polysaccharide
biosynthesis protein - Chlorobium phaeobacteroides
(strain DSM 266)
Length = 431
Score = 36.3 bits (80), Expect = 0.43
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = -2
Query: 364 GSFKHSTASDKDNCTLA-LVPGTLEIFSFPTSMFPGAFSHLFA-----IYLGTFTNHTPL 203
GSFK++ D C+L+ ++ E SFP P + I++GT+ N + +
Sbjct: 199 GSFKYTNILSFD-CSLSHMIKVAKEYISFPVYRMPQKLVNSIGLNIPVIFIGTYFNSSNV 257
Query: 202 PVFDKSNSVIVVEYKIY*QSIADTILTAFKSTKVVKISFNYN*ILENLLAL 50
+ S +V+ V ++ +SIAD ++K+ YN +++ + L
Sbjct: 258 GYYSLSKNVVSVPVRLIGKSIADVFYPKLNNSKLKSCDI-YNMLMKTTIVL 307
>UniRef50_A7PDM7 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 613
Score = 35.9 bits (79), Expect = 0.56
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +3
Query: 210 VWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEAVLCLKDPGEQSIPKE 389
+W+V V + + + K GN+ + +L R+P R+ V + A L + GE++I
Sbjct: 271 LWMVSVNNALLDTYSKC-GNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLF 329
Query: 390 HKLDVSNVNTQSLGVFS 440
H+++ S + + S
Sbjct: 330 HEMEESGIRPDGIAFIS 346
>UniRef50_Q8SSF8 Cluster: TRANSCRIPTION INITIATION FACTOR TFIIF BETA
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep:
TRANSCRIPTION INITIATION FACTOR TFIIF BETA SUBUNIT -
Encephalitozoon cuniculi
Length = 228
Score = 35.5 bits (78), Expect = 0.74
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTR-AKVQLSLSE 341
EL+++N +WL KVP ++A + E+G+L+I++ T A + L LS+
Sbjct: 2 ELNINNRHTKIWLAKVPLFLAERILGQSREAEIGELEITKATSTEPAVLSLRLSK 56
>UniRef50_Q1DLV0 Cluster: Putative uncharacterized protein; n=3;
Eurotiomycetidae|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 370
Score = 33.1 bits (72), Expect = 4.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 180 ELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEV 278
+LD +N + VWL ++PK + W K + E+
Sbjct: 44 DLDFANAAQDVWLTRIPKILWENWSKLDDDEEI 76
>UniRef50_Q4SHV0 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 362
Score = 32.7 bits (71), Expect = 5.2
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +1
Query: 451 IDYQERKKAEGKKARDDKEAVLN 519
++Y+++KK EGK+AR DK+ VL+
Sbjct: 52 LEYEKKKKEEGKRARADKQQVLD 74
>UniRef50_Q17PC8 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 3370
Score = 32.7 bits (71), Expect = 5.2
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 STTMTELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEA 344
ST+ +L+ S+ G+ + + ++ +P + + K K S + T A + SL ++
Sbjct: 442 STSQADLEQSSLGQAECDTSLVEQLSES-VASPVHADQSK-KSSSIKSTPASARKSLRKS 499
Query: 345 VLCLKDPGEQSIP-KEHKLDVSNVNTQSLGVFSHIAH 452
C+ PGEQSI ++ N T + + + AH
Sbjct: 500 SECILAPGEQSIQIANESINTQNFETTATAIDNSSAH 536
>UniRef50_UPI0001555759 Cluster: PREDICTED: similar to
glibenclamide-sensitive voltage-gated potassium channel,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to glibenclamide-sensitive voltage-gated
potassium channel, partial - Ornithorhynchus anatinus
Length = 449
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +3
Query: 228 PKYIANKWEKAPGNIEVGKLKISRVPGTRAKVQLSLSEAVLCLKDPGEQSIPKEHKLDVS 407
PK IA+ WE G L ++R+P T ++ ++ L L P E + EH L
Sbjct: 71 PKDIAHFWELGGGT---SLLDLARIPITADSLRTFATDIFLDLSRPSELWLTAEHLLRAV 127
Query: 408 NVNTQSLG 431
+ ++LG
Sbjct: 128 RTHVENLG 135
>UniRef50_Q015B9 Cluster: Dna topoisomerase ii binding protein 1;
n=3; Ostreococcus tauri|Rep: Dna topoisomerase ii
binding protein 1 - Ostreococcus tauri
Length = 1269
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 171 TMTELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEVGKLKISRVP-GTRAKVQLSLSEAV 347
++T L GRG + + + A +W K PG+ L ++ VP A+++ + + V
Sbjct: 774 SVTTEHLWRGGRGAEMGVISAHAAERWSKVPGSTAFSGLSVAIVPFAAHARIEQKMLDTV 833
Query: 348 L 350
L
Sbjct: 834 L 834
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,550,346
Number of Sequences: 1657284
Number of extensions: 9076245
Number of successful extensions: 19738
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19734
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -