Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   4.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.2  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 357 KDPGEQSIPKEHKLDVSNVNTQSLGV 434
           K PG   IPKE  L   +V  + LG+
Sbjct: 460 KSPGPDGIPKEFYLRAFDVIERELGL 485


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 183 LDLSNTGRGVWLVKVPKYIANKWEKAPGNIEV 278
           LDLS     V L+K P  + ++W+ +   I++
Sbjct: 148 LDLSKAKTTVRLLKKPPSLDSEWKSSTSTIQL 179


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 244 FAIYLGTFTNHTPLPVFDKSNSVIVVEYKIY*QSI 140
           FA+ L    NH PL     + ++ VV + ++ Q I
Sbjct: 609 FALVLLVDVNHIPLQPMFLTTTIAVVYFTVFLQGI 643


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,061
Number of Sequences: 2352
Number of extensions: 9011
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)