Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B11f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.82 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.82 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   3.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   4.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   4.4  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   7.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = +3

Query: 135 YLIMEEPTLRYEKIDFLGEGQFATVYKAKDAKTDKIV 245
           +L M+E ++  +++ +LG GQ+ + +     KTD+I+
Sbjct: 248 FLGMKE-SVEVDQLSWLGSGQYISDFVGSCRKTDQIL 283


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = +3

Query: 135 YLIMEEPTLRYEKIDFLGEGQFATVYKAKDAKTDKIV 245
           +L M+E ++  +++ +LG GQ+ + +     KTD+I+
Sbjct: 286 FLGMKE-SVEVDQLSWLGSGQYISDFVGSCRKTDQIL 321


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 177 DFLGEGQFATVYKAKDAKTDKIVAVKKI 260
           D + E    ++  AKDAK   IVA+ KI
Sbjct: 228 DGVKEQTLQSIEMAKDAKVPIIVAINKI 255


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 180 FLGEGQFATVYKA 218
           FLG G F  VYKA
Sbjct: 72  FLGSGGFGIVYKA 84


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 402 FDFMDTDLEIIIKDNTIVLTPANVK 476
           F++   ++EII+KD   +  P+ +K
Sbjct: 339 FEYGGNNIEIIVKDPETLQFPSGMK 363


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 446 IVLYYYF*VCIHKVKHQR 393
           +++YYY  +  H V H++
Sbjct: 226 LIIYYYSQIVSHVVNHEK 243


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 176 NFFIS*SWFFHDQIIINSTFIQF 108
           N   S SW  HD +  + T+I F
Sbjct: 46  NVSCSVSWEVHDPVTNSDTYIGF 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,464
Number of Sequences: 438
Number of extensions: 2865
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)