Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002196-4|AAB53979.1|  198|Caenorhabditis elegans Ribosomal pro...   233   4e-62
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z35604-5|CAA84680.2|  269|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF098999-4|AAC68729.1|  659|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical...    27   6.2  
AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical...    27   6.2  
U41531-4|AAR85902.1|  578|Caenorhabditis elegans Guanylyl cyclas...    27   8.1  
U41531-3|AAR85901.1|  702|Caenorhabditis elegans Guanylyl cyclas...    27   8.1  
U41531-2|AAR85900.1|  594|Caenorhabditis elegans Guanylyl cyclas...    27   8.1  
AY275184-1|AAP32292.1|  594|Caenorhabditis elegans soluble guany...    27   8.1  
AY275183-1|AAP32291.1|  578|Caenorhabditis elegans soluble guany...    27   8.1  
AY275182-1|AAP32290.1|  702|Caenorhabditis elegans soluble guany...    27   8.1  

>AF002196-4|AAB53979.1|  198|Caenorhabditis elegans Ribosomal
           protein, large subunitprotein 19 protein.
          Length = 198

 Score =  233 bits (571), Expect = 4e-62
 Identities = 105/173 (60%), Positives = 135/173 (78%)
 Frame = +1

Query: 1   SSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRA 180
           S+L+LQKRLA++V++CGK +VWLDPNE++EI+  NSRQ+IR+++ DGL+I+KPV VHSR 
Sbjct: 2   SNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRF 61

Query: 181 RVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYH 360
           R R+  EARRKGRH G+GKRRGTANARMP+K LW                AKK+D+HLYH
Sbjct: 62  RAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYH 121

Query: 361 SLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEXRRNKVKEARKRRE 519
            LY++AKGN FKNK+ L+EYI +KK E  R K L+DQA+ RR+K KE+RKRRE
Sbjct: 122 ELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKNKESRKRRE 174


>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
            ZC373.4 protein.
          Length = 1211

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 94   ANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 228
            ++T+S +N+R ++ D   +K  V  H     R ++E R+K R  G
Sbjct: 1055 SDTSSSKNVRILLTDEQSVKSSVRSHPSVSTRDSSEERKKVRFAG 1099


>Z35604-5|CAA84680.2|  269|Caenorhabditis elegans Hypothetical
           protein ZK1058.5 protein.
          Length = 269

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 106 SRQNIRKMIK-DGLVIKKPVAVHSRARVRKNTEARRKGR 219
           S +N+RKMIK  G V+ +   ++  A +R   EAR   R
Sbjct: 170 SAENVRKMIKIGGSVVVRDYGINDHAMIRFGREARISDR 208


>AF098999-4|AAC68729.1|  659|Caenorhabditis elegans Hypothetical
           protein W04C9.6 protein.
          Length = 659

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 213 LSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 76
           ++T FC+FAD S   +  R  DD+  ++   +  SG  + D+I F+
Sbjct: 435 VNTIFCLFADASPAKWT-RLQDDDVAIEEEKEEYSG-SIEDIIKFL 478


>AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27b protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 358 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEXRRNKVKEARKRRE 519
           H+   + +GNV K +       H K  +KAR+ +  ++   +  K+KE  K++E
Sbjct: 80  HAATHEVQGNVTKKRTK-----HSKTRQKARSSVTLEKLAQKNQKMKEELKKQE 128


>AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27a protein.
          Length = 574

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 358 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEXRRNKVKEARKRRE 519
           H+   + +GNV K +       H K  +KAR+ +  ++   +  K+KE  K++E
Sbjct: 188 HAATHEVQGNVTKKRTK-----HSKTRQKARSSVTLEKLAQKNQKMKEELKKQE 236


>U41531-4|AAR85902.1|  578|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoformc protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 498 LHFIAAXLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 370
           LH++   +  +++ L    + +  +D+  EH L LEH+ +RLH
Sbjct: 17  LHYVQGQIRNISQELFQTEVVIELLDI--EHDLNLEHVIMRLH 57


>U41531-3|AAR85901.1|  702|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoformb protein.
          Length = 702

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 498 LHFIAAXLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 370
           LH++   +  +++ L    + +  +D+  EH L LEH+ +RLH
Sbjct: 141 LHYVQGQIRNISQELFQTEVVIELLDI--EHDLNLEHVIMRLH 181


>U41531-2|AAR85900.1|  594|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoforma protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 498 LHFIAAXLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 370
           LH++   +  +++ L    + +  +D+  EH L LEH+ +RLH
Sbjct: 141 LHYVQGQIRNISQELFQTEVVIELLDI--EHDLNLEHVIMRLH 181


>AY275184-1|AAP32292.1|  594|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31c protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 498 LHFIAAXLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 370
           LH++   +  +++ L    + +  +D+  EH L LEH+ +RLH
Sbjct: 141 LHYVQGQIRNISQELFQTEVVIELLDI--EHDLNLEHVIMRLH 181


>AY275183-1|AAP32291.1|  578|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31b protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 498 LHFIAAXLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 370
           LH++   +  +++ L    + +  +D+  EH L LEH+ +RLH
Sbjct: 17  LHYVQGQIRNISQELFQTEVVIELLDI--EHDLNLEHVIMRLH 57


>AY275182-1|AAP32290.1|  702|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31a protein.
          Length = 702

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 498 LHFIAAXLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 370
           LH++   +  +++ L    + +  +D+  EH L LEH+ +RLH
Sbjct: 141 LHYVQGQIRNISQELFQTEVVIELLDI--EHDLNLEHVIMRLH 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,183,994
Number of Sequences: 27780
Number of extensions: 251674
Number of successful extensions: 848
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)