Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B08f
(408 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 175 3e-43
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 158 5e-38
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 155 2e-37
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 149 3e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 144 8e-34
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 127 1e-28
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 125 4e-28
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 119 3e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 116 1e-25
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 116 2e-25
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 115 3e-25
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 107 6e-23
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 106 2e-22
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 103 2e-21
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 100 1e-20
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 99 4e-20
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 79 3e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 1e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 60 2e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 58 7e-08
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 53 2e-06
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 53 3e-06
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 46 3e-04
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 35 0.55
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 1.3
UniRef50_A2S1H0 Cluster: Putative uncharacterized protein; n=5; ... 33 2.2
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 2.9
UniRef50_Q46S43 Cluster: Glycosyl hydrolase, BNR repeat; n=1; Ra... 33 2.9
UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3; ... 32 5.1
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY0403... 31 6.8
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 8.9
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 175 bits (426), Expect = 3e-43
Identities = 81/107 (75%), Positives = 91/107 (85%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY +
Sbjct: 3 KKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYEGY 62
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 341
LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 63 PLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 158 bits (383), Expect = 5e-38
Identities = 71/96 (73%), Positives = 81/96 (84%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ +
Sbjct: 3 KKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAY 62
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 308
LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 63 VLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 155 bits (377), Expect = 2e-37
Identities = 69/110 (62%), Positives = 83/110 (75%)
Frame = +3
Query: 24 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 203
KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY +
Sbjct: 4 KRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYT 63
Query: 204 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 353
LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 64 LPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 149 bits (360), Expect = 3e-35
Identities = 64/97 (65%), Positives = 81/97 (83%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP +
Sbjct: 3 KKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEY 62
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 311
LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 63 ALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 144 bits (348), Expect = 8e-34
Identities = 67/110 (60%), Positives = 83/110 (75%)
Frame = +3
Query: 24 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 203
KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S ++
Sbjct: 4 KRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALTKYK 63
Query: 204 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 353
LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 64 LPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 127 bits (306), Expect = 1e-28
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +3
Query: 144 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 323
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 324 RDMSRPQAVQR 356
RDM+RPQ VQR
Sbjct: 71 RDMARPQNVQR 81
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 125 bits (301), Expect = 4e-28
Identities = 62/107 (57%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Frame = +3
Query: 30 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 209
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 210 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 344
K LY KL+YCV CAIH KVVRN K + +T P P + PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 119 bits (286), Expect = 3e-26
Identities = 51/94 (54%), Positives = 68/94 (72%)
Frame = +3
Query: 24 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 203
KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y ++
Sbjct: 4 KRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQGYE 63
Query: 204 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 305
LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 64 LPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 116 bits (280), Expect = 1e-25
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Frame = +3
Query: 24 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM-- 197
KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 4 KRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSD 63
Query: 198 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 347
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 64 FTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 116 bits (278), Expect = 2e-25
Identities = 57/97 (58%), Positives = 70/97 (72%)
Frame = +3
Query: 15 TRRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 194
T+R+ AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+
Sbjct: 2 TKREETTVSLAKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFK 60
Query: 195 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 305
+ LP LY KLHYCVSCAIHS+VVRN K RR P
Sbjct: 61 AYMLPMLYVKLHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 115 bits (277), Expect = 3e-25
Identities = 52/100 (52%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = +3
Query: 24 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 203
KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI + +
Sbjct: 82 KRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFENEK 141
Query: 204 --LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 317
+PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 142 QGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 107 bits (258), Expect = 6e-23
Identities = 48/57 (84%), Positives = 54/57 (94%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 191
+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 3 KKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 106 bits (254), Expect = 2e-22
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Frame = +3
Query: 24 KRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS-VY- 191
KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS VY
Sbjct: 4 KRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASPVYG 63
Query: 192 PMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 320
F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 64 ANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 103 bits (246), Expect = 2e-21
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 66 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 245
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 246 AIHSKVVRNRSKKDRRIRTPPK 311
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 100 bits (239), Expect = 1e-20
Identities = 43/93 (46%), Positives = 66/93 (70%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y +
Sbjct: 3 KKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYEYY 62
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 299
+PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 63 TMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 98.7 bits (235), Expect = 4e-20
Identities = 41/91 (45%), Positives = 63/91 (69%)
Frame = +3
Query: 27 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 206
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 207 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 299
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 79.0 bits (186), Expect = 3e-14
Identities = 36/92 (39%), Positives = 56/92 (60%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P +
Sbjct: 3 KKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLPGY 62
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 296
+ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 63 KAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 66.9 bits (156), Expect = 1e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +3
Query: 57 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 227
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/108 (28%), Positives = 55/108 (50%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 344
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 58.0 bits (134), Expect = 7e-08
Identities = 41/85 (48%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +3
Query: 18 RRKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 188
RR RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 2 RRMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR------- 53
Query: 189 YPMFQLPKLYAKLHYCVSCAIHSKV 263
Y KLH CVSCAIH KV
Sbjct: 54 --------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVYPM 197
+KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 3 KKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAIIMR 62
Query: 198 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 293
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 63 YPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/95 (25%), Positives = 49/95 (51%)
Frame = +3
Query: 21 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 200
+KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 3 KKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI--- 59
Query: 201 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 305
+ + YC++CA+ +++ RS+++R+ + P
Sbjct: 60 -ISRYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 46.0 bits (104), Expect = 3e-04
Identities = 31/89 (34%), Positives = 42/89 (47%)
Frame = -2
Query: 314 TLGRSTDSSVFLRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 135
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 134 HELFDSLVLWHAPRAVCASHSFNVTTSML 48
D LVLW+ V S +VT+++L
Sbjct: 90 SHSLDGLVLWNRSGTVDTSDRLDVTSTLL 118
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 35.1 bits (77), Expect = 0.55
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +3
Query: 18 RRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM 197
RRK R+G + RG V C C VP+ KAI I + + ++D V+
Sbjct: 6 RRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYVHTF 65
Query: 198 FQLPKLYAKLHYCVSCA 248
+ K++YC CA
Sbjct: 66 SR------KVYYCPKCA 76
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.9 bits (74), Expect = 1.3
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 69 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 248
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 249 IHSKVVRNRSK 281
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_A2S1H0 Cluster: Putative uncharacterized protein; n=5;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia mallei (strain NCTC 10229)
Length = 99
Score = 33.1 bits (72), Expect = 2.2
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 3 AEFGTRRKRRNGGRAKH--GRGHVKAVRCTNCARCVPKDK 116
A G RR+ R G RA+H G GHV +R T+ PK K
Sbjct: 39 AALGARRRHRIGERARHAAGCGHVTRLRRTHAVPTQPKPK 78
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 2.9
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 78 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 224
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q46S43 Cluster: Glycosyl hydrolase, BNR repeat; n=1;
Ralstonia eutropha JMP134|Rep: Glycosyl hydrolase, BNR
repeat - Ralstonia eutropha (strain JMP134) (Alcaligenes
eutrophus)
Length = 324
Score = 32.7 bits (71), Expect = 2.9
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 143 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITAL-TPRAEFG 3
VP HE + W + RAV + V T+ G S TA TP++ FG
Sbjct: 82 VPGHEALQDIAAWDSRRAVAVGNEGVVFTTDDGGHSWTAAQTPKSAFG 129
>UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 430
Score = 31.9 bits (69), Expect = 5.1
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +3
Query: 12 GTRRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 191
G KR+ A H H+K ++C NC+ +K+++ +IR+ E A ++ A
Sbjct: 182 GKAYKRKKNLDA-HMALHLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCS 240
Query: 192 PMFQL-PKLYAKLHYCVSCAIHSKVV-RNRSKKDRRIRTPPKS 314
+L P K H C K++ + R K ++++ P S
Sbjct: 241 ICKELFPSTSVKTHEWY-CKNREKIIEKQRVSKILKVQSLPSS 282
>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 3588
Score = 31.9 bits (69), Expect = 5.1
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +3
Query: 51 HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLH 230
+G + VR TN RC+ K +K NI+ + + S M+ LP+
Sbjct: 2245 NGSEGLSEVRVTN--RCIMCGKLVK-----NIISTENKEEQDGTSEVVMYSLPQTTGVWA 2297
Query: 231 YCVSCAIHSKVVRNRSKK 284
CV+C +SK + N K+
Sbjct: 2298 LCVACEAYSKYLENLCKE 2315
>UniRef50_Q7RHF5 Cluster: Putative uncharacterized protein PY04032;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04032 - Plasmodium yoelii yoelii
Length = 1508
Score = 31.5 bits (68), Expect = 6.8
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 102 VPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI-HSKVVRNRS 278
V K + +K I+ I+ A+ +IND + MF + + CV+ I H+ + RN +
Sbjct: 589 VEKKRCEQKLDIKKIINNDALTNINDLEIRKMFDSSEYNTEKINCVTGDICHTTMFRNNN 648
Query: 279 -----KKDRRIRT 302
KKD++I++
Sbjct: 649 SNHEEKKDKKIKS 661
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 8.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 24 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 128
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,308,958
Number of Sequences: 1657284
Number of extensions: 5877043
Number of successful extensions: 16546
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 16077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16534
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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