Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B08f
         (408 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...   203   2e-54
AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    26   0.61 
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    26   0.61 
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    26   0.61 
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    26   0.61 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   5.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.7  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   7.5  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    22   7.5  
AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N p...    22   9.9  
AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N p...    22   9.9  
AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N p...    22   9.9  
AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical prote...    22   9.9  
AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory a...    22   9.9  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score =  203 bits (496), Expect = 2e-54
 Identities = 93/111 (83%), Positives = 101/111 (90%)
 Frame = +3

Query: 24  KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ 203
           +RRNGGR KH RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+DASVY  + 
Sbjct: 3   ERRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYV 62

Query: 204 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 356
           LPKLYAKLHYCVSCAIHSKVVRNRSK+ RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 63  LPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQR 113


>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.8 bits (54), Expect = 0.61
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 48  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 179
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.8 bits (54), Expect = 0.61
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 48  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 179
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.8 bits (54), Expect = 0.61
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 48  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 179
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 25.8 bits (54), Expect = 0.61
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 48  KHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 179
           K G+GH +  +  N   C P+   I      N+  +  + D N+
Sbjct: 50  KEGKGHDRFEKLRNAKACFPEFGGIASIAFVNVGRSRGIFDRNE 93


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 254 QQSCQEQIEERQKNPYSSQ 310
           QQ  Q+Q ++RQ+ P S Q
Sbjct: 254 QQLSQQQQQQRQRQPSSQQ 272


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 16/75 (21%), Positives = 32/75 (42%)
 Frame = +3

Query: 90   CARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVR 269
            CA  V K + + ++ IR  + +    DI  ASV+   +         Y +   +   +  
Sbjct: 808  CATTVRKGRKLYQYTIRLPINSPWKEDILIASVFNECRPDAETVAYLYHIRMELICPIPE 867

Query: 270  NRSKKDRRIRTPPKS 314
             ++ + R+I  P +S
Sbjct: 868  EQNTRGRKIYAPEES 882


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 286 TEESVLLPRVTSLGTCHVHRQ 348
           T+ S+  PR+T   T HV+ +
Sbjct: 176 TDGSIFPPRITKNSTLHVYEK 196


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 54  GRGHVKAVRCTNCARCV 104
           G  + KAV CTN  +C+
Sbjct: 262 GAANHKAVNCTNDVKCL 278


>AY341149-1|AAR13713.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 197 HWVYRGIVNISDRRRFYDVPNH 132
           H++YRG V  SDR  +  +  H
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH 82


>AY341147-1|AAR13711.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 197 HWVYRGIVNISDRRRFYDVPNH 132
           H++YRG V  SDR  +  +  H
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH 82


>AY341146-1|AAR13710.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 197 HWVYRGIVNISDRRRFYDVPNH 132
           H++YRG V  SDR  +  +  H
Sbjct: 61  HFLYRGSVVTSDRTWWIPITYH 82


>AJ973476-1|CAJ01523.1|  126|Anopheles gambiae hypothetical protein
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 84  TNCARCVPKDKAIKKFVIRNIVE 152
           T+CA+C  K K+  + VI  +++
Sbjct: 70  TDCAKCSEKQKSGTEKVINYLID 92


>AJ697729-1|CAG26922.1|  126|Anopheles gambiae putative sensory
           appendage protein SAP-3 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 84  TNCARCVPKDKAIKKFVIRNIVE 152
           T+CA+C  K K+  + VI  +++
Sbjct: 70  TDCAKCSEKQKSGTEKVINYLID 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,695
Number of Sequences: 2352
Number of extensions: 7064
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)