Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YTV7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q204F8 Cluster: Cps2E; n=80; Streptococcus|Rep: Cps2E -...    32   9.2  
UniRef50_Q8I3L3 Cluster: Putative uncharacterized protein PFE125...    32   9.2  
UniRef50_Q22GV8 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A5KAA5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q4YTV7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 136

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = +3

Query: 228 FICGCITVEFSIF------FLNVNNINFCCCVTALKDLSLKPFSIILKVN*NISSHKLEN 389
           F+C C    +S++      F N+  I  C  V  L D+   PFS+   ++ ++++  +  
Sbjct: 44  FLCTCNNYTYSLYYYFFRNFCNIFIIRMCMLVYMLSDI-FYPFSLSFSISVSVTNKNINK 102

Query: 390 VFRWILL 410
           +F W  L
Sbjct: 103 LFAWAYL 109


>UniRef50_Q204F8 Cluster: Cps2E; n=80; Streptococcus|Rep: Cps2E -
           Streptococcus suis
          Length = 459

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -2

Query: 358 FTFNIIEKGFNDKSLRAVTQQQKFILLTFKKKIENSTVI 242
           + FN+I K F D  L + T Q+K IL+T  +  EN  V+
Sbjct: 113 YLFNVIIKQFKDSFLFSTTYQKKTILITTAELWENMQVL 151


>UniRef50_Q8I3L3 Cluster: Putative uncharacterized protein PFE1255w;
           n=2; root|Rep: Putative uncharacterized protein PFE1255w
           - Plasmodium falciparum (isolate 3D7)
          Length = 1849

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = -2

Query: 352 FNIIEKGFNDKSLRAVTQQQKFI--LLTFKKKIENSTVIHPHINQ*CLKADLLKITNYRK 179
           +N + K  ND  ++ + +++  +  L +F+K  EN  ++  +IN+  L+ +LLK    +K
Sbjct: 707 YNNMIKELNDIKIKHIERKEHILNYLSSFEKAKENKNIVEEYINKYNLQINLLK-EKIKK 765

Query: 178 RNDK 167
            N+K
Sbjct: 766 ENNK 769


>UniRef50_Q22GV8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 203

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -2

Query: 511 NREKXEKCCQDVSENISHNGLHSTKNMHHRFYYMSKIQRNTFSSL*LEMF-*FTFNIIEK 335
           N +K E C    S +  + G+  TKN+   F+ +++ Q   F  L L++F  F FN IEK
Sbjct: 16  NMKKIETCQNMQSLHFIYKGIRCTKNI--EFFLLAQ-QVQKFEKL-LDLFLDFEFNTIEK 71

Query: 334 GFNDKSLRAVTQQQKFILLTFKKKIEN 254
             N K      +Q  F LL    K  N
Sbjct: 72  N-NQKQNTNQEKQNLFYLLQQLPKCRN 97


>UniRef50_A5KAA5 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3073

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 476  IRKHFSQWTTQYKKYASQILLHE*NPTEYIFQLVT*NVLIHFQYY 342
            +R HF+ W   Y K  + +LL      EY+F+ +  +V+  F+YY
Sbjct: 2192 LRSHFNSWLATYAKKQTYLLLIR-TLNEYLFRRLFSHVVQKFKYY 2235


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,455,363
Number of Sequences: 1657284
Number of extensions: 7693209
Number of successful extensions: 16951
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16947
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)