Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   2.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.6  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 464 FSQWTTQYKKYASQILLHE 408
           F+Q  TQY +Y S  L H+
Sbjct: 222 FTQQQTQYSQYGSWFLPHQ 240


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 511 NREKXEKCCQDVSENISHNGLHSTKNMHHR 422
           N+++ E+  Q   +N+ HNG    ++ HH+
Sbjct: 216 NKKRIEEKSQ--IDNLFHNGFMQEQSTHHQ 243


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = -2

Query: 493 KCCQDVSENISHNGLHSTKNMHHRFYYMSKI 401
           K C     ++     H  KN H++ + M  I
Sbjct: 551 KVCDQAFSSLKELSNHMVKNSHYKEHIMRSI 581


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 112 TELQNSSSQNCLIDSCLQ 59
           ++L+NSS +NC+  S L+
Sbjct: 62  SDLENSSEENCVSMSNLK 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,059
Number of Sequences: 336
Number of extensions: 2372
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)