Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B05f
(512 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 188 9e-47
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 178 5e-44
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 166 2e-40
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 151 1e-35
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 134 8e-31
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 130 1e-29
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 129 3e-29
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 107 1e-22
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 104 1e-21
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 103 2e-21
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 103 3e-21
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 101 1e-20
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 101 1e-20
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 100 2e-20
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 100 2e-20
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 99 3e-20
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 98 1e-19
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 98 1e-19
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 97 3e-19
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 96 5e-19
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 94 1e-18
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 93 3e-18
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 91 1e-17
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 91 2e-17
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 91 2e-17
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 90 3e-17
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 90 3e-17
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 89 4e-17
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 89 4e-17
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 89 5e-17
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 89 5e-17
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 88 1e-16
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 88 1e-16
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 87 2e-16
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 87 2e-16
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 87 2e-16
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 87 2e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 87 2e-16
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 87 3e-16
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 87 3e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 87 3e-16
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 86 4e-16
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 86 4e-16
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 86 4e-16
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 86 5e-16
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 86 5e-16
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 85 7e-16
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 85 7e-16
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 85 9e-16
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 85 9e-16
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 85 9e-16
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 85 1e-15
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 85 1e-15
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 84 2e-15
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 84 2e-15
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 84 2e-15
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 83 3e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 83 3e-15
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 3e-15
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 83 3e-15
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 83 4e-15
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 83 4e-15
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 83 4e-15
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 83 5e-15
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 83 5e-15
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 82 6e-15
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 82 8e-15
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 81 1e-14
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 81 1e-14
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 81 1e-14
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 81 1e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 81 1e-14
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 81 1e-14
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 81 1e-14
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 81 1e-14
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 81 2e-14
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 81 2e-14
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 81 2e-14
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 81 2e-14
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 81 2e-14
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 80 3e-14
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 80 3e-14
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 80 3e-14
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 80 3e-14
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 80 3e-14
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 80 3e-14
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 80 3e-14
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 79 4e-14
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 79 4e-14
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 79 4e-14
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 79 4e-14
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 79 4e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 79 4e-14
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 79 6e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 79 6e-14
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 79 6e-14
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 79 8e-14
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 79 8e-14
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 79 8e-14
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 79 8e-14
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 79 8e-14
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 78 1e-13
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 1e-13
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 78 1e-13
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 78 1e-13
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 78 1e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 78 1e-13
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 78 1e-13
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 78 1e-13
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 78 1e-13
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 78 1e-13
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 77 2e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 77 2e-13
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 77 2e-13
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 77 2e-13
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 77 2e-13
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 77 2e-13
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 77 2e-13
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 77 3e-13
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 77 3e-13
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 77 3e-13
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 76 4e-13
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 76 4e-13
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 76 4e-13
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 76 4e-13
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 76 4e-13
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 76 4e-13
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 76 4e-13
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 76 5e-13
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 75 7e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 75 7e-13
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 7e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 75 7e-13
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 75 7e-13
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 75 7e-13
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 75 7e-13
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 75 7e-13
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 75 1e-12
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 75 1e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 75 1e-12
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 75 1e-12
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 75 1e-12
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 75 1e-12
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 75 1e-12
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 75 1e-12
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 75 1e-12
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 75 1e-12
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 75 1e-12
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 75 1e-12
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 75 1e-12
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 75 1e-12
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 75 1e-12
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 75 1e-12
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 75 1e-12
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 75 1e-12
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 74 2e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 74 2e-12
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 74 2e-12
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 73 3e-12
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 73 3e-12
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 73 3e-12
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 73 3e-12
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 73 3e-12
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 73 4e-12
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 73 4e-12
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 73 4e-12
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 73 4e-12
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 73 4e-12
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 73 5e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 73 5e-12
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 5e-12
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 5e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 73 5e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 73 5e-12
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 72 7e-12
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 72 7e-12
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 72 7e-12
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 72 7e-12
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 72 7e-12
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 72 7e-12
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 72 7e-12
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 72 7e-12
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 72 7e-12
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 72 7e-12
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 72 9e-12
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 72 9e-12
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 9e-12
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 72 9e-12
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 72 9e-12
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 72 9e-12
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 71 1e-11
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 71 1e-11
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 71 1e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 71 1e-11
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 71 1e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 71 1e-11
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 71 2e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 71 2e-11
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 71 2e-11
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 71 2e-11
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 71 2e-11
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 71 2e-11
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 71 2e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 71 2e-11
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 71 2e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 71 2e-11
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 71 2e-11
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 71 2e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 70 3e-11
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 70 3e-11
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 3e-11
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 70 3e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 3e-11
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 70 3e-11
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 70 3e-11
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 70 3e-11
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 70 4e-11
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 70 4e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 70 4e-11
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 4e-11
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 70 4e-11
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 70 4e-11
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 70 4e-11
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 70 4e-11
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 70 4e-11
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 70 4e-11
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 70 4e-11
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 69 5e-11
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 69 5e-11
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 69 5e-11
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 69 5e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 5e-11
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 69 5e-11
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 69 5e-11
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 69 5e-11
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 69 6e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 69 6e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 6e-11
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 69 6e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 69 8e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 8e-11
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 69 8e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 69 8e-11
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 69 8e-11
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 1e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 68 1e-10
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 68 1e-10
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 68 1e-10
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 68 1e-10
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 68 1e-10
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 68 1e-10
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 68 1e-10
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 68 1e-10
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 68 1e-10
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 68 1e-10
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 68 1e-10
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 68 1e-10
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 67 2e-10
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 67 2e-10
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 67 2e-10
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 67 2e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 67 2e-10
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 67 2e-10
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 67 3e-10
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 67 3e-10
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 67 3e-10
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 67 3e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 67 3e-10
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 67 3e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 66 3e-10
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 66 3e-10
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 3e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 66 3e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 66 3e-10
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 66 3e-10
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 4e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 66 4e-10
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 4e-10
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 66 4e-10
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 66 4e-10
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 66 4e-10
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 66 4e-10
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 66 4e-10
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 66 4e-10
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 66 4e-10
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 66 4e-10
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 66 4e-10
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 66 6e-10
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 66 6e-10
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 66 6e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 66 6e-10
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 66 6e-10
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 66 6e-10
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 66 6e-10
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 66 6e-10
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 66 6e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 66 6e-10
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 66 6e-10
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 66 6e-10
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 65 8e-10
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 65 8e-10
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 65 8e-10
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 65 8e-10
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 65 8e-10
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 65 8e-10
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 65 8e-10
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 65 8e-10
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 65 8e-10
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 65 8e-10
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 65 1e-09
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 1e-09
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 65 1e-09
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 65 1e-09
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 65 1e-09
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 65 1e-09
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 1e-09
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 65 1e-09
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 65 1e-09
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 65 1e-09
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 65 1e-09
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 65 1e-09
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 65 1e-09
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 65 1e-09
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 65 1e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 64 1e-09
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 64 1e-09
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 64 1e-09
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 64 1e-09
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 64 1e-09
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 64 1e-09
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 64 1e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 64 1e-09
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 64 1e-09
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 64 2e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 64 2e-09
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 64 2e-09
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 64 2e-09
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 64 2e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 64 2e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 64 2e-09
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 64 2e-09
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 64 2e-09
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 64 2e-09
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 64 2e-09
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 64 2e-09
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 64 2e-09
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 64 2e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 3e-09
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 63 3e-09
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 3e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 63 3e-09
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 63 3e-09
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 63 3e-09
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 63 3e-09
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 63 3e-09
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 63 3e-09
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 63 3e-09
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 63 3e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 63 4e-09
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 63 4e-09
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 63 4e-09
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 62 5e-09
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 62 5e-09
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 62 5e-09
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 62 5e-09
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 62 5e-09
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 62 5e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 62 5e-09
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 62 5e-09
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 62 7e-09
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 62 7e-09
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 62 7e-09
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 62 7e-09
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 7e-09
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 62 7e-09
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 62 7e-09
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 7e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 62 7e-09
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 62 7e-09
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 62 1e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 62 1e-08
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 62 1e-08
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 61 1e-08
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 1e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 1e-08
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 61 1e-08
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 61 1e-08
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 61 1e-08
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 61 1e-08
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 61 1e-08
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 1e-08
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 61 1e-08
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 61 2e-08
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 61 2e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 61 2e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 61 2e-08
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 61 2e-08
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 61 2e-08
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 61 2e-08
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 61 2e-08
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 61 2e-08
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 61 2e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 2e-08
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 60 2e-08
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 2e-08
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 2e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 2e-08
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 60 2e-08
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 60 2e-08
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 60 2e-08
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 60 2e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 60 2e-08
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 60 2e-08
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 60 3e-08
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 60 3e-08
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 3e-08
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 60 3e-08
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 60 3e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 60 3e-08
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 60 3e-08
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 60 3e-08
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 60 3e-08
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 60 3e-08
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 60 3e-08
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 60 3e-08
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 60 3e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 60 3e-08
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 60 3e-08
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 60 3e-08
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 60 3e-08
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 60 3e-08
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 3e-08
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 3e-08
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 60 3e-08
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 60 3e-08
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 60 4e-08
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 60 4e-08
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 60 4e-08
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 60 4e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 60 4e-08
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 60 4e-08
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 60 4e-08
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 60 4e-08
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 60 4e-08
UniRef50_UPI00015B4CF1 Cluster: PREDICTED: similar to DEAD box A... 59 5e-08
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 59 5e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 59 5e-08
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 59 5e-08
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 59 5e-08
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 59 5e-08
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 59 5e-08
UniRef50_A2FQ89 Cluster: Type III restriction enzyme, res subuni... 59 5e-08
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 59 5e-08
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 59 5e-08
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 59 5e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 59 7e-08
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 59 7e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 59 7e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 59 7e-08
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 59 7e-08
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 59 7e-08
UniRef50_Q4Q5M6 Cluster: ATP-dependent RNA helicase-like protein... 59 7e-08
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 59 7e-08
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 59 7e-08
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 59 7e-08
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 59 7e-08
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 59 7e-08
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 59 7e-08
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 59 7e-08
UniRef50_Q08BL1 Cluster: Zgc:153386; n=2; Danio rerio|Rep: Zgc:1... 58 9e-08
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 9e-08
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 58 9e-08
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 58 9e-08
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 188 bits (457), Expect = 9e-47
Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 2/137 (1%)
Frame = +3
Query: 75 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 248
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 249 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVV 428
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQ V+
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVI 121
Query: 429 DSLLVITLNAKCHACIG 479
L + A CHACIG
Sbjct: 122 -LALGDYMGATCHACIG 137
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 178 bits (434), Expect = 5e-44
Identities = 84/104 (80%), Positives = 95/104 (91%), Gaps = 1/104 (0%)
Frame = +3
Query: 105 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 281
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 282 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 413
VIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ
Sbjct: 70 VIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQ 113
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 166 bits (404), Expect = 2e-40
Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Frame = +3
Query: 84 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 260
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 261 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 413
PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 68 PCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 151 bits (365), Expect = 1e-35
Identities = 77/108 (71%), Positives = 87/108 (80%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+LQ +D +RE QALILAPTRELA QIQ + L +N +CHACIG
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGL-LALGDYMNVQCHACIG 142
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 134 bits (325), Expect = 8e-31
Identities = 66/115 (57%), Positives = 86/115 (74%)
Frame = +3
Query: 135 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 314
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 315 TATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
T TF+I LQ+ID + R+ Q +ILAP RELA+QI VV + LN + CIG
Sbjct: 107 TGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY-LNIEAFCCIG 160
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 130 bits (315), Expect = 1e-29
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +3
Query: 141 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 320
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 321 TFSISILQQIDTSIRECQALILAPTRELAQQIQXVV 428
F++++ Q +DTS RE QALI +PTRELA Q + V+
Sbjct: 329 MFALTVYQMVDTSNREVQALISSPTRELASQTEKVI 364
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 129 bits (312), Expect = 3e-29
Identities = 63/90 (70%), Positives = 76/90 (84%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVV 428
LQ+ID + QA+ILAPTRELA QIQ VV
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVV 109
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 107 bits (258), Expect = 1e-22
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 336 ILQQID 353
+LQ +D
Sbjct: 96 VLQCLD 101
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 104 bits (249), Expect = 1e-21
Identities = 51/88 (57%), Positives = 64/88 (72%)
Frame = +3
Query: 174 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 353
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ++
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLN 75
Query: 354 TSIRECQALILAPTRELAQQIQXVVDSL 437
+ +CQAL+LAPTRELAQQI+ V+ +L
Sbjct: 76 EELTQCQALVLAPTRELAQQIEKVMRAL 103
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 103 bits (248), Expect = 2e-21
Identities = 56/115 (48%), Positives = 73/115 (63%)
Frame = +3
Query: 93 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 272
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 273 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q V +L
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTL 127
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 103 bits (246), Expect = 3e-21
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +3
Query: 201 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 380
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QAL
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 381 ILAPTRELAQQ 413
ILAPTRELAQQ
Sbjct: 107 ILAPTRELAQQ 117
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 101 bits (242), Expect = 1e-20
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I +++IAQ+QSGTGKTATF +
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLL 134
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXV 425
++L +I T + CQ L +APTRELA QI+ V
Sbjct: 135 AMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 101 bits (241), Expect = 1e-20
Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Frame = +3
Query: 99 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCI 269
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI +
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDP 128
Query: 270 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 416
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI
Sbjct: 129 SNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQI 177
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 100 bits (239), Expect = 2e-20
Identities = 49/86 (56%), Positives = 63/86 (73%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 339 LQQIDTSIRECQALILAPTRELAQQI 416
LQ+ID + R QAL+L PTRELA Q+
Sbjct: 64 LQRIDAADRSVQALVLCPTRELALQV 89
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 100 bits (239), Expect = 2e-20
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ + + QALI+ PTRELA Q VV +L
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTL 137
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 99 bits (238), Expect = 3e-20
Identities = 49/92 (53%), Positives = 65/92 (70%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 318 ATFSISILQQIDTSIRECQALILAPTRELAQQ 413
F+++ LQ D S Q L+LA TRE+A Q
Sbjct: 90 GAFAVAALQICDMSQDVTQILVLASTREIAAQ 121
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 97.9 bits (233), Expect = 1e-19
Identities = 48/106 (45%), Positives = 69/106 (65%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHAC 473
+L D S+++ Q LIL TR+L ++ ++ +L LN HAC
Sbjct: 80 VLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKF-LNVSIHAC 124
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 97.9 bits (233), Expect = 1e-19
Identities = 45/95 (47%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++L ++D +I QA+ +AP+RELA+QIQ V+D +
Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQI 241
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 96.7 bits (230), Expect = 3e-19
Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKTATFSI 332
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
++L +ID + CQ L +APTREL QI V + N K I
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAI 154
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 95.9 bits (228), Expect = 5e-19
Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 335
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
IL+ ID S R QALILAPTRELA Q+ +DS+
Sbjct: 61 ILETIDESSRNTQALILAPTRELAIQVAEEIDSI 94
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 94.3 bits (224), Expect = 1e-18
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+D SI Q L++APTRELA QI
Sbjct: 63 LDCSINRIQHLVIAPTRELANQI 85
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 93.5 bits (222), Expect = 3e-18
Identities = 45/94 (47%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 335
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+L +D SI QA+ ++PT+ELA Q V+ +
Sbjct: 129 MLNCVDPSINAPQAICISPTKELALQTFEVISKI 162
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 91.1 bits (216), Expect = 1e-17
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
ID S + QAL+LAPTRELAQQ+
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQV 139
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 90.6 bits (215), Expect = 2e-17
Identities = 45/104 (43%), Positives = 65/104 (62%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+RE Q L+LAPTRELAQQ+ V+S N K + G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYG 111
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 90.6 bits (215), Expect = 2e-17
Identities = 45/100 (45%), Positives = 65/100 (65%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 318 ATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
A F+I IL ++ A ILAPTRELAQQI+ DSL
Sbjct: 133 AAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSL 172
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 89.8 bits (213), Expect = 3e-17
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
++ R QAL+L PTRELA Q+
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQV 90
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
++D RE Q L+LAPTRELAQQ+
Sbjct: 70 RLDLQRREPQVLVLAPTRELAQQV 93
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 89.4 bits (212), Expect = 4e-17
Identities = 47/109 (43%), Positives = 70/109 (64%)
Frame = +3
Query: 153 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 332
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
L ++ + + + +I++PTRELA Q + + S L A AC+G
Sbjct: 77 GTLARLRLTSKTTELIIVSPTRELAIQTENTLKS-----LGANTRACVG 120
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 89.4 bits (212), Expect = 4e-17
Identities = 45/94 (47%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSIS 335
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+L +++ QA+ LAP+RELA+Q VV +
Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEM 185
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 89.0 bits (211), Expect = 5e-17
Identities = 41/86 (47%), Positives = 60/86 (69%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 348 IDTSIRECQALILAPTRELAQQIQXV 425
ID QAL+L PTRELA Q+ +
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQI 176
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 89.0 bits (211), Expect = 5e-17
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +3
Query: 177 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 350
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ+
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 88.2 bits (209), Expect = 1e-16
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+D ++ Q L+LAPTRELA Q+
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQV 90
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 87.8 bits (208), Expect = 1e-16
Identities = 43/90 (47%), Positives = 60/90 (66%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSL 437
+ T R QALIL PTRELA Q+ + L
Sbjct: 68 VSTG-RHVQALILTPTRELAIQVSGEIQKL 96
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 87.4 bits (207), Expect = 2e-16
Identities = 48/105 (45%), Positives = 63/105 (60%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
ID I Q +ILAPTRE+A QI+ V+ SL K + IG
Sbjct: 85 MIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVESFIG 129
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 87.4 bits (207), Expect = 2e-16
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 348 IDTS--IRECQALILAPTRELAQQI 416
D S + +ALILAPTRELA Q+
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQV 90
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 87.0 bits (206), Expect = 2e-16
Identities = 41/94 (43%), Positives = 61/94 (64%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
I Q+IDTS RE QA+ILAPT ELA QI + L
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLL 94
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/86 (44%), Positives = 60/86 (69%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 348 IDTSIRECQALILAPTRELAQQIQXV 425
+D QA+++ PTRELA Q+ +
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 87.0 bits (206), Expect = 2e-16
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 342 QQIDTSIRECQALILAPTRELAQQ 413
+++D + QAL+L+PTRELA Q
Sbjct: 65 ERLDPDNKNVQALVLSPTRELAIQ 88
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 86.6 bits (205), Expect = 3e-16
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDS 434
IDTSI++ Q ++LAPTRELA Q+ ++S
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIES 105
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 86.6 bits (205), Expect = 3e-16
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
QID S + Q L++APTRELA Q+
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQV 89
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 86.6 bits (205), Expect = 3e-16
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 332
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++L +++ Q L LAPT ELA Q VV+ +
Sbjct: 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQM 190
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 86.2 bits (204), Expect = 4e-16
Identities = 47/108 (43%), Positives = 68/108 (62%)
Frame = +3
Query: 93 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 272
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 273 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 416
G+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI
Sbjct: 82 GKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQI 128
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 86.2 bits (204), Expect = 4e-16
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+IDT+ + QAL+L PTRELA Q+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQV 89
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 86.2 bits (204), Expect = 4e-16
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Frame = +3
Query: 33 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWD-QVVETFDDMNLKEELLRGI 209
SS D D N + +YD + G DTD + +F ++ L + ++ G+
Sbjct: 54 SSTLAVPDGAADGANSSGLQESNYDVEVQL--GDPDTDSPLSSISSFSELGLPQGIIDGL 111
Query: 210 YAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSISILQQID-TSIRECQAL 380
A F+KPS IQ RA+ + R++IAQ+QSGTGKT F ++IL ++D + QAL
Sbjct: 112 LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQAL 171
Query: 381 ILAPTRELAQQIQXVVDSL 437
LAP+RELA+QIQ V+ S+
Sbjct: 172 ALAPSRELARQIQSVIQSI 190
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 85.8 bits (203), Expect = 5e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
Q+ + L+L TRELA QI+ L T N K A G
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFT-NFKVKAVYG 142
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 85.8 bits (203), Expect = 5e-16
Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 345 QIDTSI---RECQALILAPTRELAQQIQ 419
++ I R ++LIL PTRELA QIQ
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQ 89
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 85.4 bits (202), Expect = 7e-16
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 348 IDTSIRECQALILAPTRELAQQI 416
I R +ALIL PTRELA Q+
Sbjct: 91 IPADERRVRALILCPTRELALQV 113
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 85.4 bits (202), Expect = 7e-16
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
++DT Q +++APTRELA Q+
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQV 86
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 85.0 bits (201), Expect = 9e-16
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D NL+EE+L+ I + GFE PS +Q AI P ++ +DVI QA+SG GKTA F +S+L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 348 ID--TSIRECQALILAPTRELAQQI 416
ID + + QAL+L T ELA QI
Sbjct: 190 IDPQAAPHKVQALVLCNTHELAMQI 214
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 85.0 bits (201), Expect = 9e-16
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 344
+ D+NL +LL+GIY GF +PS IQ A+ + ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++DT I Q + L PTRELA+Q Q VV+ L
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNEL 204
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 85.0 bits (201), Expect = 9e-16
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++SGTGKT ++
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCG 108
Query: 336 ILQQIDTSIRE-CQALILAPTRELAQQIQXVVDSL 437
+L +T I E Q +++ PTREL+ Q+ V+ L
Sbjct: 109 VLG--NTKIGERTQVMVVTPTRELSTQVTEVISGL 141
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 84.6 bits (200), Expect = 1e-15
Identities = 45/104 (43%), Positives = 60/104 (57%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
+ D D V TF + L EE+L + GF P+ IQ AI P ++ RDV+ AQ+GTGKT
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 318 ATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
A F + +L +D R QAL+LAPTRELA Q ++ T
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAART 140
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 84.6 bits (200), Expect = 1e-15
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 348 IDTSIRECQALILAPTRELAQQI 416
ID QAL+LAPTRELA Q+
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 84.6 bits (200), Expect = 1e-15
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISIL 341
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 342 QQIDTSIRECQALILAPTRELAQQI 416
Q ID S + Q LI+APTREL QI
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQI 86
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/83 (55%), Positives = 52/83 (62%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 348 IDTSIRECQALILAPTRELAQQI 416
I+ S + AL+L TRELA QI
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQI 130
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 83.8 bits (198), Expect = 2e-15
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSIS 335
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 336 ILQQIDTSIRECQALILAPTRELAQQI 416
+L ID + RE QALILAPTRELAQQI
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQI 98
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 83.8 bits (198), Expect = 2e-15
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 318 ATFSISILQQID---TSIRECQALILAPTRELAQQIQXVV 428
A F++ +L ++ T QAL+L PTRELA Q+ +
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAI 148
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/94 (41%), Positives = 62/94 (65%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
I Q+ID+S RE QALILAPT EL QI + +L
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTL 94
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 83.4 bits (197), Expect = 3e-15
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 339 LQQIDT--SIRECQALILAPTRELAQQIQXVVDSL 437
L+Q+D+ R+ QA+++ PTRELA Q+ + L
Sbjct: 103 LEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERL 137
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 83.4 bits (197), Expect = 3e-15
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGKTA F++ +L +
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 348 IDTSIRECQALILAPTRELAQQI 416
ID + RE Q LILAPTRELA Q+
Sbjct: 85 IDPARREPQLLILAPTRELALQV 107
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 83.4 bits (197), Expect = 3e-15
Identities = 38/93 (40%), Positives = 64/93 (68%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGKT + + I
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+++ID S E QA+IL+PT EL QI V++ L
Sbjct: 61 IEKIDDSKNEMQAIILSPTHELGVQINNVLNDL 93
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 83.4 bits (197), Expect = 3e-15
Identities = 41/93 (44%), Positives = 63/93 (67%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++G+GKTA F+I I
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
LQ + T+ + AL+LAPTRELA QI+ D+L
Sbjct: 157 LQTLYTAAQPYYALVLAPTRELAFQIKETFDAL 189
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 83.0 bits (196), Expect = 4e-15
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 318 ATFSISILQQI-DTSIRECQALILAPTRELAQQIQXVVDSL 437
F I L+ + DT Q LIL PTRELA Q+ V + L
Sbjct: 79 LAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQL 119
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 83.0 bits (196), Expect = 4e-15
Identities = 39/90 (43%), Positives = 61/90 (67%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D+ +L++ IY YGFE PS +QQ +I IQG+ + AQ+G+GKTA F IS+L
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSL 64
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ CQA+I++PT+EL+ Q V+++L
Sbjct: 65 VNPQKSICQAVIISPTKELSNQTLEVINTL 94
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 83.0 bits (196), Expect = 4e-15
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+++ QAL++APTRELA Q+
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQV 86
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 82.6 bits (195), Expect = 5e-15
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 344
F+ + L E LLR I GFE P+ +Q++AI ++ D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+ID + R QALIL+PTREL QI
Sbjct: 64 KIDANNRNTQALILSPTRELCLQI 87
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 82.6 bits (195), Expect = 5e-15
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQ 344
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++D + QAL+L PTRELA Q+ +DSL
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSL 94
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 82.6 bits (195), Expect = 5e-15
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GKTA F
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 330 ISILQQI---DTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKC 464
+ +L+++ D+ R + LIL PTRELA Q Q V+++L + C
Sbjct: 246 LPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSC 293
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 82.2 bits (194), Expect = 6e-15
Identities = 41/95 (43%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 332
V++F+++ LK ELL+G+Y GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCL 96
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++L ++ + + Q L +APT ELA QI V++ +
Sbjct: 97 AMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQM 131
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 81.8 bits (193), Expect = 8e-15
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+ ++ Q LIL P REL +QI
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQI 89
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/104 (42%), Positives = 60/104 (57%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+ Q LILAPTRE+A QI V+ ++ + +CH IG
Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIG 168
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 81.4 bits (192), Expect = 1e-14
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+I+ QA+++APTRELA Q+
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQV 87
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 81.4 bits (192), Expect = 1e-14
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+ID + + QAL+L PTRELA Q+
Sbjct: 74 KIDITSKVPQALVLVPTRELALQV 97
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 81.4 bits (192), Expect = 1e-14
Identities = 44/104 (42%), Positives = 60/104 (57%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+ Q LILAPTRE+A QI V+ ++ + +CH IG
Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIG 167
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
++D + QA++L PTRELA Q+
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQV 87
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GKTA F+I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIP 61
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQ 419
I Q +D + QAL+L PTRELA Q++
Sbjct: 62 ICQLVDWDENKPQALVLVPTRELAIQVK 89
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 81.0 bits (191), Expect = 1e-14
Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSISIL 341
+ + L +LL+GI GF KPS IQQ A+ P I G ++IAQA++G+GKTATF++++L
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCAL-PLILGSCTNIIAQAKNGSGKTATFALAML 159
Query: 342 QQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIGWHQCP 494
+++ ++ QAL + PTRELA Q V+ L T KC +G QCP
Sbjct: 160 SKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFT-QIKCF--LGVPQCP 207
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 81.0 bits (191), Expect = 1e-14
Identities = 41/92 (44%), Positives = 56/92 (60%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLV 443
ID+ QA+IL PTRELA Q+ + L V
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSV 97
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/86 (43%), Positives = 60/86 (69%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 348 IDTSIRECQALILAPTRELAQQIQXV 425
+D QA+++ PTRELA Q+ +
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQI 168
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 80.6 bits (190), Expect = 2e-14
Identities = 36/86 (41%), Positives = 58/86 (67%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 339 LQQIDTSIRECQALILAPTRELAQQI 416
L ++D +++ Q L+LAPTRELA Q+
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQV 128
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 80.6 bits (190), Expect = 2e-14
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 342 QQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ QAL+L PTRELA Q+ + SL
Sbjct: 64 NRVIKG-EGLQALVLCPTRELAVQVTEEISSL 94
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 80.6 bits (190), Expect = 2e-14
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 348 IDTSIRECQALILAPTRELAQQI 416
ID +R QAL+L PTRELAQQ+
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQV 93
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 80.6 bits (190), Expect = 2e-14
Identities = 50/142 (35%), Positives = 77/142 (54%)
Frame = +3
Query: 12 HEGNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE 191
H + S S+ +D P K+ P+ D+ + T+ D +V F D+ +
Sbjct: 60 HSASGSGISDHDDDDDPSADKDSPAADEEQDE----KKVATIADDGKKV--EFSDLGVIP 113
Query: 192 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 371
+++ GF+ P+ IQ +AI +Q RDVI AQ+G+GKTA F+I ILQ + + +
Sbjct: 114 QIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPF 173
Query: 372 QALILAPTRELAQQIQXVVDSL 437
A +LAPTRELA QI V++L
Sbjct: 174 FACVLAPTRELAYQISQQVEAL 195
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/89 (41%), Positives = 59/89 (66%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVD 431
+ID S+++ Q L++ PTRELA Q+ ++
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALE 97
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 80.2 bits (189), Expect = 3e-14
Identities = 37/90 (41%), Positives = 59/90 (65%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ NL+ L+ + FEKP+ IQ R I ++ ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSL 437
ID+ I+E QA+++APTRELAQQ+ + L
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHL 95
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 6/90 (6%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 345 QIDT------SIRECQALILAPTRELAQQI 416
+ T R +ALIL PTRELA QI
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQI 91
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 79.8 bits (188), Expect = 3e-14
Identities = 37/83 (44%), Positives = 53/83 (63%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++ + QALIL PTREL Q+
Sbjct: 71 LEVESKHLQALILCPTRELVIQV 93
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 79.8 bits (188), Expect = 3e-14
Identities = 42/89 (47%), Positives = 53/89 (59%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 330 ISILQQIDTSIRECQALILAPTRELAQQI 416
+ ILQ + I QALILAPTRELA Q+
Sbjct: 62 LPILQNLSPEISTTQALILAPTRELAIQV 90
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+D SI + Q+LIL PTRELA Q+
Sbjct: 63 VDISINQTQSLILCPTRELALQV 85
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+I R AL++ PTRELA Q+
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQV 104
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 79.8 bits (188), Expect = 3e-14
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 345 QIDTSIR-ECQALILAPTRELAQQIQXVVDSL 437
++ R +A+I+ PTRELA+QIQ V+++L
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEAL 93
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 79.4 bits (187), Expect = 4e-14
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+++ + Q L+LAPTRELA Q+
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQV 155
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 79.4 bits (187), Expect = 4e-14
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 341
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 342 QQIDTSIRECQALILAPTRELAQQI 416
QQI+ S+++ Q L+L PTREL QQ+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQV 86
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 79.4 bits (187), Expect = 4e-14
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDS 434
I+ +I Q LILAPTRELA Q+ V +
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQT 102
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 79.4 bits (187), Expect = 4e-14
Identities = 39/90 (43%), Positives = 59/90 (65%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ LK +LL G+ G+E PS IQ++ I I +D++A++++GTGKT +F I ILQ
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQN 76
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSL 437
I + +++IL PTRELA QI ++ L
Sbjct: 77 IYSESYGIESIILVPTRELALQISSLLRKL 106
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 79.4 bits (187), Expect = 4e-14
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNA--KCH 467
Q+ SI Q LIL PTREL+ QI+ V + L + T N+ CH
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCH 113
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 79.4 bits (187), Expect = 4e-14
Identities = 35/90 (38%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+ M L +LR + GF+ PS +Q ++I +QG+D++A+A++G+GKTA +SI I+Q
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83
Query: 345 QI-----DTSIRECQALILAPTRELAQQIQ 419
++ ++I+ +A++L PTREL +Q++
Sbjct: 84 KVLMAKEKSNIKGVKAVVLVPTRELCEQVK 113
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 79.0 bits (186), Expect = 6e-14
Identities = 38/92 (41%), Positives = 60/92 (65%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F +L ++ + +KP+ IQ R I ++GRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLV 443
++ ++E QA+I+APTRELA QI + S+LV
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSILV 95
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 79.0 bits (186), Expect = 6e-14
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 335
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+GTGKTA F +
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLP 60
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDS 434
I+Q+I+ +++ QALIL PTRELA Q+ + S
Sbjct: 61 IVQKIEPGLKKPQALILCPTRELAIQVNEEIKS 93
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 79.0 bits (186), Expect = 6e-14
Identities = 42/100 (42%), Positives = 63/100 (63%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 318 ATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
A F+I ILQ++ + +LILAPTREL+ QI+ + SL
Sbjct: 93 AAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISL 132
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 78.6 bits (185), Expect = 8e-14
Identities = 37/95 (38%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F +M L + LL+ + G+ +P+ IQ++AI ++G+D++A+A++G+GKTA +++ ++Q+
Sbjct: 8 FHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQR 67
Query: 348 I---DTSIRE--CQALILAPTRELAQQIQXVVDSL 437
I S+RE +ALIL PT+EL QQ+Q ++ L
Sbjct: 68 ILASKQSVREQDVKALILVPTKELGQQVQTMIRQL 102
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 78.6 bits (185), Expect = 8e-14
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ S + QA+++APTRELA Q+ + +L
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNL 117
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 78.6 bits (185), Expect = 8e-14
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 345 QI-DTSIRE-CQALILAPTRELAQQI 416
++ T R+ +AL+L PTRELA QI
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQI 87
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 78.6 bits (185), Expect = 8e-14
Identities = 47/109 (43%), Positives = 60/109 (55%)
Frame = +3
Query: 87 KDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 266
+D S D G + G T +F D+ L E L R + A GF+ PS +Q +
Sbjct: 16 RDDTSTDARAGANVGERATS----SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLG 71
Query: 267 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 413
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTRE A Q
Sbjct: 72 RFGCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQ 120
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 78.6 bits (185), Expect = 8e-14
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++GTGKTA F +++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTV 131
Query: 339 LQQIDTSIRECQALILAPTRELAQQ 413
L I+T + + L++ TRELAQQ
Sbjct: 132 LNTINTESNKVECLVITHTRELAQQ 156
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 78.2 bits (184), Expect = 1e-13
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 336 ILQQI------DTSIRECQALILAPTRELAQQI 416
++Q + +T+ + +ALILAPTRELAQQ+
Sbjct: 61 LIQMLSRQSREETAPKHPRALILAPTRELAQQV 93
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 78.2 bits (184), Expect = 1e-13
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 348 I---DTSIRECQALILAPTRELAQQIQXVVD 431
+ + + A+I+APTRELAQQI V+
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQVE 93
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 348 IDTSIRE--CQALILAPTRELAQQI 416
+D + R+ Q L+LAPTRELA Q+
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQV 93
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 78.2 bits (184), Expect = 1e-13
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISI 338
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 339 LQQIDTSIRE-CQALILAPTRELAQQIQXVVDSL 437
L++ID + +A+I+ PTRELA QI + SL
Sbjct: 78 LERIDFKANKFVKAIIVTPTRELALQIFEELKSL 111
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 78.2 bits (184), Expect = 1e-13
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F ++ L +L + A G+E PS IQ ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+ID ++ E Q L+LAPTRELA Q+
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQV 108
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/83 (40%), Positives = 58/83 (69%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 348 IDTSIRECQALILAPTRELAQQI 416
I + + Q L++ PTRELA Q+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQV 86
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 77.8 bits (183), Expect = 1e-13
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 335
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 336 ILQQIDTSIRECQALILAPTRELAQQI 416
+LQQID R Q+LIL PTREL QI
Sbjct: 61 LLQQIDVKNRVPQSLILCPTRELCLQI 87
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 77.8 bits (183), Expect = 1e-13
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+D ++ QAL+L PTRELA Q+
Sbjct: 88 LDPALTRAQALVLCPTRELADQV 110
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 77.8 bits (183), Expect = 1e-13
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Frame = +3
Query: 96 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 263
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 264 CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPTRELAQQIQXVV 428
++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAI 127
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 77.8 bits (183), Expect = 1e-13
Identities = 41/107 (38%), Positives = 62/107 (57%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V+TF+++ L LL G+ F P+ IQ AI + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+Q + +I + A+I+ PTRELA Q+Q L + KC A IG
Sbjct: 84 VQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIG 130
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 77.8 bits (183), Expect = 1e-13
Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +3
Query: 66 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 242
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 243 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 416
Q I I G DV+ QA+SG GKTA F ++ LQQI+ + L++ TRELA QI
Sbjct: 71 QHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQI 128
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 77.4 bits (182), Expect = 2e-13
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D NL ++R I GF S IQ A+ + GRD+I +AQ+GTGKTA F I++LQ+
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 348 I------DTSIRECQALILAPTRELAQQIQXVVDSL 437
+ + E +ALILAPTRELA QI D L
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGL 195
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 77.4 bits (182), Expect = 2e-13
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Frame = +3
Query: 144 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 323
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 324 FSISILQQIDT-----SIRECQALILAPTRELAQQI 416
F + IL +I + R C+AL+LAPTRELA QI
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQI 146
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 348 IDTSIRECQALILAPTRELAQQI 416
I Q LI+APTRELA QI
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQI 85
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 77.4 bits (182), Expect = 2e-13
Identities = 43/104 (41%), Positives = 59/104 (56%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+ Q L+LAPTRE+A QI VV ++ +CH IG
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIG 131
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISI 338
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 339 LQQIDTSI--RECQALILAPTRELAQQI 416
L++ D I + C+ L+LAPTREL QI
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQI 91
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 77.0 bits (181), Expect = 2e-13
Identities = 39/90 (43%), Positives = 58/90 (64%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + LK+ELL G+ GF++ + +Q+ AI + RDV+A+A++GTGKT +F I ILQ
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGKTGSFLIPILQM 82
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ + QAL+L TRELA Q V +L
Sbjct: 83 VNPAKDHIQALVLLHTRELAMQTAKVAKTL 112
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 77.0 bits (181), Expect = 2e-13
Identities = 44/118 (37%), Positives = 67/118 (56%)
Frame = +3
Query: 126 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 305
P T D ++D ++ F M L E +LRG+ F PS IQ RAI G D++ QA+SG
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSG 69
Query: 306 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
TGKT F++ I + + + Q+L + PTRE+A QI+ V++ + N + + IG
Sbjct: 70 TGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIG 127
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 76.6 bits (180), Expect = 3e-13
Identities = 35/98 (35%), Positives = 60/98 (61%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAK 461
+ Q LIL PTREL +Q+ + L + N K
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIK 103
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 76.6 bits (180), Expect = 3e-13
Identities = 42/106 (39%), Positives = 62/106 (58%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF+++ L L+ GF+ PS IQ I ++GRD+IA A++G+GKTA+F+I IL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 342 QQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
Q+ A+IL PTRELA QI ++ + +N C IG
Sbjct: 64 NQLSEDPYGVFAVILTPTRELAVQIGEQFNA-IGAPMNVNCSVVIG 108
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 76.6 bits (180), Expect = 3e-13
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 336 ILQQIDTSIRECQALILAPTRELAQQI 416
ILQ++ + ALILAPTREL QI
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQI 135
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 76.6 bits (180), Expect = 3e-13
Identities = 40/83 (48%), Positives = 50/83 (60%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++ + L++ TRELA QI
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQI 129
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 76.2 bits (179), Expect = 4e-13
Identities = 44/101 (43%), Positives = 58/101 (57%)
Frame = +3
Query: 177 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 356
M +++L G+ GF++PS IQ +AI G D+I +A+SGTGKT F I L+ ID
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 357 SIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
I Q LILAPTRE+A QI V S+ + K IG
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIG 101
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 76.2 bits (179), Expect = 4e-13
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +3
Query: 153 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 332
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 333 SILQQI-DTSIRECQALILAPTRELAQQI 416
+LQQ+ + + +ALIL+PTR+LA QI
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQI 98
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 76.2 bits (179), Expect = 4e-13
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 348 -IDTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
ID +AL++ PTRELA QI ++ L V T
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHT 97
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 76.2 bits (179), Expect = 4e-13
Identities = 37/93 (39%), Positives = 55/93 (59%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ TF+ + + L+ G+ P+ +Q I IQ +D++ +Q+GTGKT + + I
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPI 60
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++IDTS RE QALILAPT EL QI V+ L
Sbjct: 61 FEKIDTSKRETQALILAPTHELVMQITNQVELL 93
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 76.2 bits (179), Expect = 4e-13
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 345 Q-IDTSIRECQALILAPTRELAQQIQXVVDSL 437
+ + T + L++APTRELA QI SL
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSL 93
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 76.2 bits (179), Expect = 4e-13
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK E+LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 348 IDTSIRE-CQALILAPTRELAQQI 416
++ S C L++ TRELA QI
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQI 126
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 76.2 bits (179), Expect = 4e-13
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCIQG---RDVIAQAQSGTGKTATFSIS 335
F+D+NL EL++G+Y FEKPS IQ ++ P I + +IAQA +G+GKT F +
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISL-PMIMTPPHKHLIAQAHNGSGKTTCFVLG 151
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+L ++D ++RE QAL + PTRELA Q V+ +
Sbjct: 152 MLSRVDPTLREPQALCICPTRELANQNMEVLQKM 185
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 75.8 bits (178), Expect = 5e-13
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 345 ----QIDTSI----RECQALILAPTRELAQQI 416
Q +TS +ALIL PTRELA Q+
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQV 103
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 75.4 bits (177), Expect = 7e-13
Identities = 39/112 (34%), Positives = 64/112 (57%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F + L E++L GI G+ PS IQ AI ++G++++ Q+QSG+GKT F +S LQ
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKGKNLVMQSQSGSGKTMAFLLSTLQ 85
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIGWHQCPLK 500
I+ CQ +I+ TRELA+Q + D L + + C+ ++ +K
Sbjct: 86 LINRKDPFCQVIIIVNTRELARQTASIFDELTELMDDVTRLLCLPGYEGDIK 137
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 75.4 bits (177), Expect = 7e-13
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+ + Q L+LAPTRELA Q+
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQV 99
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 75.4 bits (177), Expect = 7e-13
Identities = 37/95 (38%), Positives = 59/95 (62%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSLLV 443
L++ID + QALI+APTRELA QI + +LV
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLV 98
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 75.4 bits (177), Expect = 7e-13
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 348 IDTSIRECQALILAPTRELAQQI 416
I+ QALIL PTRELA Q+
Sbjct: 109 INLDQPLLQALILCPTRELASQV 131
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 75.4 bits (177), Expect = 7e-13
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 348 IDTS---IRECQALILAPTRELAQQI 416
+ S R ++LIL PTRELA Q+
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQV 378
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 75.4 bits (177), Expect = 7e-13
Identities = 33/105 (31%), Positives = 65/105 (61%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+ L E++L+ + + G+ PS +Q+ I ++G++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
I+ QALI+ PTRELA Q++ + + + +C A G
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLK-KVRCSAIFG 107
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 75.4 bits (177), Expect = 7e-13
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
+TF+D+ L ELLRG+Y FEKPS IQ + + R++IAQA +G+GKT F++
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNGSGKTTCFTL 146
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+L +ID +++ Q L++ PTREL Q V++ +
Sbjct: 147 GMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERM 181
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 75.4 bits (177), Expect = 7e-13
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +3
Query: 42 RRSEDWPEDSKNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 218
++S+D E +G +KD S ++ T D +V T + E L+
Sbjct: 10 QKSDD--ESGGDGNNKDSNSIAPSAIAINSKKKQTTKD-IVTTQGAQFISESLIGETQTK 66
Query: 219 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 398
+KPSA+ QR I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 67 DLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTH 124
Query: 399 ELAQQIQXVVDSLLVITLNAKCHACIG 479
+LA + Q V+ +L L+AK HA G
Sbjct: 125 DLAHETQNVI-GVLGQFLSAKAHAFCG 150
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 74.9 bits (176), Expect = 1e-12
Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 348 IDT-SIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++T S ++LI+ PTRELA Q V + L +T N K IG
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLT-NLKASLIIG 118
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 74.9 bits (176), Expect = 1e-12
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 345 QIDTSIREC---QALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++ RE + L+L PTREL Q+ V L T C A G
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGG 289
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GKTA F
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 330 ISILQQID--TSI-RECQALILAPTRELAQQIQXVV 428
I +L ++ TS + +ALIL PTRELAQQ+ V
Sbjct: 100 IPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSV 135
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 348 IDTSIRECQALILAPTRELAQQI 416
+ + L++ PTRELA Q+
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQV 84
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/106 (36%), Positives = 66/106 (62%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D + + V ++ L +L GI A G+++P+ IQ+ + ++G+D++A+A++G+GKT
Sbjct: 3 DVEEEVKVVQWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKT 62
Query: 318 ATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLN 455
+ I I+Q+I I +ALI+ PTREL QI+ VV L V L+
Sbjct: 63 GAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVVRELCVKCLD 107
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
++L +ID ++ Q + LAPT ELA+QI VV+ + N K H I
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 724
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ M L EL R I + GF P+ IQ++AI + GRD++A +++G+GKTA F I ++ +
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 348 ID--TSIRECQALILAPTRELAQQIQXVVDSLL 440
+ +++ + LIL PTRELA QI V+ +LL
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALL 104
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 74.9 bits (176), Expect = 1e-12
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Frame = +3
Query: 117 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 290
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 291 QAQSGTGKTATFSISILQQIDTSIREC---QALILAPTRELAQQIQXVVDSL 437
A +GTGKTA F++ +L+++ R+ + L+L PTREL Q+ V L
Sbjct: 261 CAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQL 312
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 74.9 bits (176), Expect = 1e-12
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +3
Query: 60 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 239
PE ++ + + P P T +VV +F ++ L+ LLRGI + P+A
Sbjct: 15 PESPQSPKRRASDASQSEPASPPAP--TPAKEVVASFAELQLEPRLLRGIRDQKWGSPTA 72
Query: 240 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-ALILAPTRELAQQI 416
+Q +AI +QGRD++A++ +GTGKT + + IL +T +R+ + +LIL PT+ELA QI
Sbjct: 73 VQSKAIPLALQGRDILARSGTGTGKTGAYLLPILH--NTLLRKGKTSLILVPTKELALQI 130
Query: 417 QXVVDSL 437
V +L
Sbjct: 131 TKVAKAL 137
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 348 IDTSIRE--CQALILAPTRELAQQIQXVVDSL 437
+ T + +ALIL+PTRELA Q Q + +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEI 131
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 74.5 bits (175), Expect = 1e-12
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +3
Query: 144 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 323
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 324 FS---ISILQQIDTSIRECQALILAPTRELAQQI 416
F+ I++L + R ++L+L PTRELA Q+
Sbjct: 65 FTLPMITMLARGRARARMPRSLVLCPTRELAAQV 98
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 335
+ TF + ++++ ++ I G KP+ IQ++AI ++ D I AQ+GTGKTA F +
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP 60
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQ 419
+L ID + QALIL+PTREL QQI+
Sbjct: 61 VLHHIDANSDHIQALILSPTRELVQQIK 88
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 74.5 bits (175), Expect = 1e-12
Identities = 40/97 (41%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 339 LQQ--IDTSIRECQ---ALILAPTRELAQQIQXVVDS 434
LQ + IR AL+LAPTRELAQQI+ V +
Sbjct: 177 LQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQA 213
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 74.5 bits (175), Expect = 1e-12
Identities = 38/102 (37%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
D+ +TF+++ L+ L+R + G EKP++IQ+ AI ++G+DV+A+A++G+GKT +
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 330 ISILQQI--DTSIRE---CQALILAPTRELAQQIQXVVDSLL 440
+ +LQ++ ++ R A +L PTREL QQ+ V SL+
Sbjct: 80 LPLLQKLFCESESRNKLAPSAFVLVPTRELCQQVYSEVLSLI 121
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 74.5 bits (175), Expect = 1e-12
Identities = 50/124 (40%), Positives = 61/124 (49%), Gaps = 20/124 (16%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK ELLR I GFE PS +QQ I I G D++ QA+SG GKTA F +SILQQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 348 IDTSIRE--------------------CQALILAPTRELAQQIQXVVDSLLVITLNAKCH 467
+DT+ + + L LA TRELA QI+ D N +C
Sbjct: 117 LDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCE 176
Query: 468 ACIG 479
G
Sbjct: 177 VVYG 180
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/100 (36%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
VE+F+++ L ++R ++ FE P+ +Q + I +QGRDV A A +G+GKTA F I
Sbjct: 15 VESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPT 74
Query: 339 LQQI---DTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
++++ ++ + +A+IL+PTRELA Q V+ ++ T
Sbjct: 75 VERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFT 114
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 74.5 bits (175), Expect = 1e-12
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF ++NL LLR G++KP+ IQ I + GRD+ A A +G+GKTA F++ L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 342 QQI---DTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+++ + + LIL PTRELA QI ++ +L T + KC +G
Sbjct: 227 ERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFT-DIKCGLIVG 274
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 74.5 bits (175), Expect = 1e-12
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = +3
Query: 111 PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVI 287
P M + +++ +++ L LL+ +Y GFEKP+ IQ AI ++ RD+I
Sbjct: 18 PSPMTDAVVASEYLDESAKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDII 77
Query: 288 AQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQXVVDSLLV 443
A+A +G+GKT +SI I+Q I S +++IL PT+ELA Q+ ++ LLV
Sbjct: 78 AKASTGSGKTGAYSIPIIQNILSEGLSEHNIKSVILVPTKELANQVTKFIEKLLV 132
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 74.5 bits (175), Expect = 1e-12
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 348 IDTSI--RECQALILAPTRELAQQIQXVV 428
+ +++ +ALIL+P RELA Q VV
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVV 159
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V TF ++ L E LL + GF +P+AIQ AI P + GRDV+ A +GTGKTA + +
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62
Query: 339 LQQIDTSIRE----CQALILAPTRELAQQI 416
LQ + R+ + LIL PTRELA Q+
Sbjct: 63 LQHLLDFPRKKSGPPRILILTPTRELAMQV 92
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 73.7 bits (173), Expect = 2e-12
Identities = 34/84 (40%), Positives = 58/84 (69%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+I+ + R QA+I+APTRELA QI
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQI 85
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 73.7 bits (173), Expect = 2e-12
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 345 QI---DTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++ + + LIL PTRELA Q V + T C CIG
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVC-LCIG 366
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 73.3 bits (172), Expect = 3e-12
Identities = 40/106 (37%), Positives = 62/106 (58%)
Frame = +3
Query: 120 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 299
++P DT V +F +M LK+E+++ I GFE PS +Q + I + +D++ QA+
Sbjct: 21 VEPSNKDTYVGTV--SFQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDILCQAK 78
Query: 300 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
SG GKTA F +SIL Q A+++ TRELA+Q+Q D +
Sbjct: 79 SGMGKTAVFVLSILNQGLFLGDHVSAIVICHTRELARQVQNEFDRM 124
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK EL I GFE PS +Q +A+ + G D++AQA+SG GKTA F ++L+Q
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 348 IDTSIR----ECQALILAPTRELAQQIQ 419
++ + CQA++L RELA QI+
Sbjct: 98 VEKVPQGQKPYCQAVVLVHARELAYQIE 125
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 348 I--DTSIRECQALILAPTRELAQQI 416
+ I + L+L+PTREL+ QI
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQI 108
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 73.3 bits (172), Expect = 3e-12
Identities = 35/87 (40%), Positives = 58/87 (66%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQ 419
+Q+I+ +AL+L PTRELA+Q+Q
Sbjct: 61 IQKIEKG-NGIRALVLTPTRELAEQVQ 86
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 73.3 bits (172), Expect = 3e-12
Identities = 32/86 (37%), Positives = 59/86 (68%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 339 LQQIDTSIRECQALILAPTRELAQQI 416
++++ + Q+LILAPTRELA Q+
Sbjct: 61 IEKV-VGKQGVQSLILAPTRELAMQV 85
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 72.9 bits (171), Expect = 4e-12
Identities = 44/116 (37%), Positives = 68/116 (58%)
Frame = +3
Query: 132 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 311
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTG
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 312 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
KT FS L+ ++T+ Q LIL PTRE+A QI+ V+ S+ K + IG
Sbjct: 74 KTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIG 129
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 335
V+ F+ L ++ + GF P+ IQ++A+ + G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 336 ILQQIDTSIRECQALILAPTRELAQQI 416
+++ ID+++++ QAL+L+PTRELA Q+
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQV 129
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 72.9 bits (171), Expect = 4e-12
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ MNL + + I GF P+ IQ++AI ++GRDV+A +++G+GKTA F I ++ +
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
Query: 348 IDTSIR--ECQALILAPTRELAQQIQXVVDSLLVIT 449
+ R +ALI+ PTRELA QI V+ + + T
Sbjct: 361 LQNHSRIVGARALIVVPTRELALQIASVLKTFIKFT 396
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+D+N+ EE+L I G++KP+ IQ+ + +D+I +++G+GKTA F I ILQ
Sbjct: 157 TFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQ 216
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
+ + + AL+++PTREL QI
Sbjct: 217 DLKVNKQSFYALVISPTRELCIQI 240
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 72.9 bits (171), Expect = 4e-12
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 341
T+D +NL LL+ I GFE P+ IQ AI ++ RD+IA+A +G+GKTA ++I I+
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPII 80
Query: 342 QQI--DTSIRECQALILAPTRELAQQIQXVVDSLLVITLN 455
Q I S Q+++L PTREL+ Q+ ++ L+ + N
Sbjct: 81 QNIMVQGSQLGTQSVVLVPTRELSNQVYQFMEQLIKFSNN 120
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 72.5 bits (170), Expect = 5e-12
Identities = 35/107 (32%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D D + ++F ++ L + +L+ + G+ +P+ IQ++ I I+G+D++ +A++G+GKT
Sbjct: 4 DEDNETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRARTGSGKT 63
Query: 318 ATFSISILQQI-----DTSIRECQALILAPTRELAQQIQXVVDSLLV 443
A F+I ++Q+I +E + LI+AP++EL +QI V+ SL +
Sbjct: 64 AAFTIPLIQKILSNKQTRKQQEIKGLIIAPSKELCKQIHDVIISLTI 110
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 72.5 bits (170), Expect = 5e-12
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 345 QI-----DTSIRECQALILAPTRELAQQI 416
Q+ S + +ALI APTRELA+QI
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQI 90
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 72.5 bits (170), Expect = 5e-12
Identities = 37/93 (39%), Positives = 57/93 (61%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
LQ+I ++ Q LI+ PTRELA Q+ V L
Sbjct: 61 LQRIQRG-KKAQVLIVTPTRELALQVADEVAKL 92
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 72.5 bits (170), Expect = 5e-12
Identities = 36/88 (40%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 345 QI----DTSIRECQALILAPTRELAQQI 416
+ + + +AL+L PTRELA Q+
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQV 93
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 72.5 bits (170), Expect = 5e-12
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 348 ID--TSIRECQALILAPTRELAQQIQXVVDSL 437
++ + R QALIL PTRELA Q++ + L
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKL 97
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 72.5 bits (170), Expect = 5e-12
Identities = 34/93 (36%), Positives = 54/93 (58%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ + R Q ++L P+RELA Q+ ++ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKL 95
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 72.1 bits (169), Expect = 7e-12
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Frame = +3
Query: 15 EGNMSYSSERRSEDWPEDS---KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET--FDDM 179
E S+ +RR + WP+ S ++ S+D D D D + F +
Sbjct: 175 EDRHSWRDDRRDDRWPDRSDHRRDDWSRDDHDDDNMDWEATELTDLDVTGIDHEGGFSAL 234
Query: 180 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 359
+ +E++ + G P IQ AI I GRDV+ +A +G+GKT F + +L ++ +
Sbjct: 235 GVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSAT 294
Query: 360 IRE---CQALILAPTRELAQQIQXVVDSL 437
RE +ALIL+PTRELA QI + SL
Sbjct: 295 PREDNRPRALILSPTRELAMQIADALSSL 323
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 72.1 bits (169), Expect = 7e-12
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 10/94 (10%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 345 QI------DTS----IRECQALILAPTRELAQQI 416
++ D S R+ + L+L PTRELA Q+
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQV 95
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 72.1 bits (169), Expect = 7e-12
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+D N LL + + GF KP+ IQ AI + D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 345 Q-IDTSIRECQALILAPTRELAQQIQXVVD 431
+ I+++ L+L PTRELA QI ++
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIE 91
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 72.1 bits (169), Expect = 7e-12
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 345 QIDT-----SIRECQALILAPTRELAQQIQXVVDSL 437
+ T + R +ALIL+PTRELA QI + L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADL 100
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 72.1 bits (169), Expect = 7e-12
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
++ +AL+LAPTRELA QI
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQI 87
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 72.1 bits (169), Expect = 7e-12
Identities = 37/87 (42%), Positives = 55/87 (63%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
V + D+ L E+++ I G+ + + +Q AI ++ +DVIA+A +GTGKT F I +
Sbjct: 11 VVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPM 70
Query: 339 LQQIDTSIRECQALILAPTRELAQQIQ 419
++ ID QAL+LAPTRELA QIQ
Sbjct: 71 VEHIDPESDAVQALVLAPTRELALQIQ 97
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 72.1 bits (169), Expect = 7e-12
Identities = 32/96 (33%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F ++ L + +L+ + G+++P+ IQ AI ++G+DV+ +A++G+GKTAT+++ ++Q+
Sbjct: 11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQK 70
Query: 348 I-----DTSIRECQALILAPTRELAQQIQXVVDSLL 440
I + S + A++LAPT+EL +Q + V++ L+
Sbjct: 71 ILNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLV 106
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 72.1 bits (169), Expect = 7e-12
Identities = 37/103 (35%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
++ ++F+++ L L+R + G EKP+ IQQ AI ++G+DV+A+A++G+GKT +
Sbjct: 42 EEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYL 101
Query: 330 ISILQQI---DTSIRE---CQALILAPTRELAQQIQXVVDSLL 440
+ +LQ++ D+ ++ A IL P+REL QQ+ V SL+
Sbjct: 102 LPLLQKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLI 144
>UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
MAK5 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 754
Score = 72.1 bits (169), Expect = 7e-12
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 54 DWPEDSKNGPSKDQGSYDGP-PGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEK 230
D K P+KD + G+D +L D D + ++++L + G+ GF++
Sbjct: 148 DLKSKKKQKPNKDDELRENAFVGVD-ASLPKDTDLPKWSMENVSLSTYTINGLAGCGFKE 206
Query: 231 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ----QIDT---SIRECQALILA 389
P+AIQ++AI +QG+DVI +A +G+GKT + I IL+ Q+++ +I+ A+I A
Sbjct: 207 PTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILERCLAQLESKTNTIKPPTAMIFA 266
Query: 390 PTRELAQQI 416
PTRELA Q+
Sbjct: 267 PTRELAHQV 275
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 72.1 bits (169), Expect = 7e-12
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +3
Query: 153 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 332
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 333 SILQQI---DTSIRECQALILAPTRELAQQIQXV 425
I++++ I + ++L PTRELA Q+ V
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADV 321
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 71.7 bits (168), Expect = 9e-12
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSI 332
++TF + + ++++G+ GF + +Q++ I+P + R D++ AQ+GTGKTA F I
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGI 59
Query: 333 SILQQIDTSIRECQALILAPTRELAQQI 416
++Q DT ++ QAL+L PTREL Q+
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQV 87
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 71.7 bits (168), Expect = 9e-12
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ +NL L R I G+ + IQ++AI + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++T +++ QA+IL PT ELA QI
Sbjct: 63 LNTHLKQPQAIILCPTHELASQI 85
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 71.7 bits (168), Expect = 9e-12
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L + L + G+ +P+ IQ +A+ + GRDV AQ+GTGKTA F++ IL +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 348 IDTSIRECQALILAPTRELAQQIQ 419
+ R + L+L PTRELA Q++
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVE 218
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 71.7 bits (168), Expect = 9e-12
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 348 ID--TSIRECQALILAPTRELAQQIQXVVDSL 437
+ + +ALIL+PTRELA Q + L
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKEL 132
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 71.7 bits (168), Expect = 9e-12
Identities = 41/108 (37%), Positives = 62/108 (57%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
V TF ++ L + L+ + G P+A+Q+R I ++GRDV+ A++G+GKTA F++
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP 134
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
IL ++ AL LAPTRELA Q+ + L L +C A IG
Sbjct: 135 ILHRLGEDPYGVAALALAPTRELAAQLAEQFRA-LGAPLGLRCLAAIG 181
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 71.7 bits (168), Expect = 9e-12
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Frame = +3
Query: 30 YSSERRSE--DWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 203
Y E +E D +S+ + + D DP T D + +F MNL LLR
Sbjct: 179 YDEEGENEVVDSDSESEEETAAEIARKDAFFSSDPTTTDPT---LPSSFTAMNLSRPLLR 235
Query: 204 GIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----E 368
+ + F P+ IQ RAI + GRD++ A +G+GKTA F + IL+++ R
Sbjct: 236 ALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAA 295
Query: 369 CQALILAPTRELAQQIQXVVDSL 437
C+ L+L PTRELA Q + V +L
Sbjct: 296 CRVLVLCPTRELAVQCEAVGKAL 318
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ TFD + +K+ LL + +G KP+ IQQ I P + +V+ A++G+GKTA F++ I
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 339 LQQIDTSIRECQALILAPTRELAQQI 416
+ + T AL+L PTRELA QI
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQI 114
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 345 QIDTSIRECQALILAPTRELAQQIQXV 425
+ E + LIL P+RE+AQQI V
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKV 119
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/86 (38%), Positives = 56/86 (65%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
VET +++ + + + + G + S IQ +++ +QG+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 339 LQQIDTSIRECQALILAPTRELAQQI 416
L++I+ + QA++L PTRELA+Q+
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQV 88
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D +L +L + ++ P+ IQQ AI +QG+D++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 348 IDTSIR-----ECQALILAPTRELAQQIQXVVDS 434
+ + R + + L+L PTRELA Q+ + S
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQVTQNIKS 96
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/88 (37%), Positives = 56/88 (63%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVV 428
+D+ Q +I+ PTRE++ QI+ V
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETV 110
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/91 (38%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 344
F+++NL + +L I GFEKP+ IQ + I + +++AQA++G+GKTA+F+I +++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSL 437
++ + +A+IL PTRELA Q+ ++SL
Sbjct: 68 LVNEN-NGIEAIILTPTRELAIQVADEIESL 97
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/95 (36%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF D+ L E+L+ + G++KP+ IQ+ +I +Q +D+I AQ+G+GKTA+F + ++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMV 68
Query: 342 Q---QIDTSIRECQALILAPTRELAQQIQXVVDSL 437
Q + R +I+ PTRELA Q+ V+D +
Sbjct: 69 QHLLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEM 103
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 348 I-----DTSIRECQALILAPTRELAQQIQXVV 428
I + +ALILAPTRELA QI+ +
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTI 180
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 70.9 bits (166), Expect = 2e-11
Identities = 30/92 (32%), Positives = 59/92 (64%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
++F + L +E+ R + G+E P+ +Q I +Q +D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 342 QQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+ ++ + QAL+L PTRELA Q++ + ++
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNI 95
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/91 (39%), Positives = 54/91 (59%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ + + E+ + + F + IQ I I+G DVI QAQ+GTGKT F I I+++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLL 440
I+ I++ Q+LIL PTREL Q+ + LL
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLL 95
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = +3
Query: 135 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTG 311
+D D V + + +L ++R I GF P+ IQ+ ++P +GR D+I AQ+G+G
Sbjct: 8 VDLDRGCDVSAWFEFDLHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCDIIGAAQTGSG 67
Query: 312 KTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
KT F++ ILQ+ + I +ALI+APTRELA Q+ ++ ++ V T
Sbjct: 68 KTLAFALPILQRLLSQGIDVLRALIVAPTRELALQVCAMMRAVAVYT 114
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GKT F I +
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471
Query: 339 LQQI--------DTSIRECQALILAPTRELAQQIQ 419
L I DT AL++APTREL QQI+
Sbjct: 472 LIYISKQPRLTKDTEADGPYALVMAPTRELVQQIE 506
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F D L ++ L G+ + KP+AIQ+ +I+P +QG+D++A A++G+GKT F I + +
Sbjct: 63 SFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFE 122
Query: 345 QIDTS----IRECQALILAPTRELAQQI 416
++ T+ + ALI+ PTRELA QI
Sbjct: 123 KLYTNQWTKLDGLGALIITPTRELALQI 150
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 70.9 bits (166), Expect = 2e-11
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
Frame = +3
Query: 72 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 224
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 225 EKPSAIQQRAIMPCIQG---RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 395
+PS IQ +P I +D+IAQA +G+GKT F + +L ++D + + QA+ + PT
Sbjct: 122 SRPSKIQA-VTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPT 180
Query: 396 RELAQQIQXVV 428
RELAQQ + V+
Sbjct: 181 RELAQQNKSVL 191
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F D+ L LL+ + F+KP+ +Q +AI ++GRDV+A+A++G+GKTA + + ILQ
Sbjct: 44 SFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQ 103
Query: 345 ------QIDTSIRECQALILAPTRELAQQIQXVVD 431
QI+ +LIL PTREL Q+ V+
Sbjct: 104 AVLKRKQINPGATYISSLILVPTRELTVQVTKEVE 138
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 341
+F+++ L E+ L + GF P+ IQ AI + G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 342 QQIDTSIRECQALILAPTRELAQQIQXVVDSLLV 443
Q++ + AL+L PTRELA Q+ + SL +
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRI 140
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+++ L +LL I G+ +P+ IQ +AI + G D+I AQ+GTGKTA +++ IL +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 348 ID-TSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
I +A+I PTREL QI+ + L T
Sbjct: 67 IKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYT 101
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = +3
Query: 180 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 359
N+ E LL + GF + IQQ++I P ++G+D++AQ+++G+GKT F I + D
Sbjct: 9 NIPEALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVK 68
Query: 360 IRECQALILAPTRELAQQIQXVVDSLLVITLNAK 461
+ Q +++ PTRELA+Q+ + + N K
Sbjct: 69 SNKPQTIVITPTRELAEQVAMELRKIAAYKANLK 102
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 70.5 bits (165), Expect = 2e-11
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 348 I-----DTSIRECQALILAPTRELAQQI 416
+ + R C+ LILAPTREL QI
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQI 160
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/98 (34%), Positives = 59/98 (60%)
Frame = +3
Query: 132 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 311
T D + Q+ + F ++L+ +++RG+ A F P+ IQ AI + G D++ Q++SGTG
Sbjct: 16 TSDVEAGQM-KHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 312 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQXV 425
KT + ++ LQ S + + L++ PTRELA Q+ +
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDI 112
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/96 (37%), Positives = 57/96 (59%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 330 ISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+ IL + + + AL+L PTRELA QI ++L
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEAL 104
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D + +F + NL +LRG+ A F P+ IQQ+ I + G+D++ A +G+GKT
Sbjct: 782 DAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKT 841
Query: 318 ATFSISILQQI---DTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
A F + IL+++ + + IL PTRELA Q V L T
Sbjct: 842 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYT 888
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/96 (37%), Positives = 57/96 (59%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 330 ISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+ IL + + + AL+L PTRELA QI ++L
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEAL 115
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D+ ++++L+ + P+ +Q+++I ++G+D++A AQ+GTGKTA F + I+Q
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 348 IDTSIRE--CQALILAPTRELAQQI 416
+ R ALIL PTRELAQQ+
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQV 93
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 70.1 bits (164), Expect = 3e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SIS 335
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGKTA+F I
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 336 ILQQIDTSIRECQALILAPTRELAQQI 416
IL R ++LIL PTRELA Q+
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQV 88
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D + +L + G++ P+ IQ+ AI + GRD++ QAQ+GTGKTA F++ ++++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 348 I-DTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+ D + L++ PTRELA Q+ S + N K A G
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYG 157
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 70.1 bits (164), Expect = 3e-11
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F+ + + + LL I G+EKP+ IQ RAI + DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 345 QI----DTSIRECQALILAPTRELAQQI 416
++ D R + L++APTREL+ QI
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQI 89
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 348 IDTSIRE--CQALILAPTRELAQQI 416
+ T R+ +ALIL PTRELA QI
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQI 88
>UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat).
ROK1-like protein; n=2; Dictyostelium discoideum|Rep:
Similar to Rattus norvegicus (Rat). ROK1-like protein -
Dictyostelium discoideum (Slime mold)
Length = 668
Score = 70.1 bits (164), Expect = 3e-11
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Frame = +3
Query: 21 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 200
N S E + + + +K + DG DP T ++ Q+ F +++ LL
Sbjct: 158 NKKVSKETQEDKHKREIATFRNKHRIKVDGTDIPDPMT---EFSQLENRF---KVRKYLL 211
Query: 201 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQA 377
I G+++PS IQ + I ++ R+V+A A +G+GKTA+FSI ILQ + +E ++
Sbjct: 212 NNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQALYEPKKEGFRS 271
Query: 378 LILAPTRELAQQI 416
+I+APTRELAQQI
Sbjct: 272 VIIAPTRELAQQI 284
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351
Query: 339 LQQI---DTSIRECQALILAPTRELAQQIQXVVDSL 437
L+++ + + +IL PTRELA Q V L
Sbjct: 352 LERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKL 387
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 70.1 bits (164), Expect = 3e-11
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +3
Query: 168 FDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
F +N L L + G+ + +Q A+ + G+DV QA++G+GKTA F + +LQ
Sbjct: 4 FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQ 63
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAK 461
QID S+ + QAL+L PTRELA Q+ + L N K
Sbjct: 64 QIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK 102
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 69.7 bits (163), Expect = 4e-11
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Frame = +3
Query: 60 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 239
P+ + N ++ DGP + TL V +F D+ ++E++ + + G P
Sbjct: 19 PDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFP 78
Query: 240 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----------TSIRECQALILA 389
IQ +I ++G D+I QA++GTGKT F I+IL +I T+ + QAL++
Sbjct: 79 IQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMC 138
Query: 390 PTRELAQQI 416
PTRELA Q+
Sbjct: 139 PTRELALQV 147
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 69.7 bits (163), Expect = 4e-11
Identities = 31/72 (43%), Positives = 51/72 (70%)
Frame = +3
Query: 213 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 392
A GF+KP+ +Q++A + G+DVIA++ +GTGKT +++ +L++I + QA+ILAP
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 393 TRELAQQIQXVV 428
+REL QI V+
Sbjct: 81 SRELVMQIFQVI 92
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/88 (40%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 345 QIDTS----IRECQALILAPTRELAQQI 416
++ + R +AL+LAPTRELA Q+
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQV 92
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 69.7 bits (163), Expect = 4e-11
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 348 -----IDTSIRECQALILAPTRELAQQI 416
+ +ALIL PTRELA Q+
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQV 90
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 348 IDTSI---RECQALILAPTRELAQQI 416
+ S R+ +AL+L PTRELA Q+
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQV 88
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 69.7 bits (163), Expect = 4e-11
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L L+RG+ A G+ P+ +Q RAI + GRD++A AQ+GTGKTA F++ +L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 348 I-DTSIRECQALILAPTRELAQQIQ 419
+ + L+L PTREL Q++
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVE 87
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + + EE+ + +P+ +Q +AI P + RDV+AQAQ+GTGKT F + IL++
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++ QALI+ PTRELA QI
Sbjct: 65 VNVEKPTIQALIITPTRELAIQI 87
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 69.7 bits (163), Expect = 4e-11
Identities = 38/112 (33%), Positives = 60/112 (53%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIGWHQCPLK 500
+ Q LIL P RELA Q+ + + L K A G H L+
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKY-LKHKTTAIYGQHNINLE 114
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 69.7 bits (163), Expect = 4e-11
Identities = 36/104 (34%), Positives = 59/104 (56%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F ++ + E++ + G P+ +Q+ I ++G DV+A A++G+GKTA F I ILQ
Sbjct: 2 SFGELGVCPEIVELLRDKGISAPTEVQKGCIPVILEGNDVVACAKTGSGKTAAFLIPILQ 61
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
+ T ++ ALI+ PTRELA QI L +I C+ +
Sbjct: 62 SLMTELKPLYALIITPTRELAHQIGEQAAGLNLIQGEPLCNVLV 105
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 69.7 bits (163), Expect = 4e-11
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Frame = +3
Query: 141 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 308
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +G+
Sbjct: 153 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 212
Query: 309 GKTATFSISILQQI-DTSIRECQALILAPTRELAQQI 416
GKT FSI IL Q+ + + +ALI++PTRELA QI
Sbjct: 213 GKTLAFSIPILMQLKQPANKGFRALIISPTRELASQI 249
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 69.7 bits (163), Expect = 4e-11
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 12/122 (9%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 330 ISILQQIDTSIRECQ------------ALILAPTRELAQQIQXVVDSLLVITLNAKCHAC 473
I ILQ + + + + A +L+PTRELA QI ++ L ++ +C
Sbjct: 65 IPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEA-LGADISLRCAVL 123
Query: 474 IG 479
+G
Sbjct: 124 VG 125
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 69.7 bits (163), Expect = 4e-11
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 339 LQQI---DTSIRECQALILAPTRELAQQIQXVVDSL 437
L+++ + + ++L PTRELA Q V L
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKL 370
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 69.7 bits (163), Expect = 4e-11
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Frame = +3
Query: 141 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 308
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +G+
Sbjct: 154 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 213
Query: 309 GKTATFSISILQQI-DTSIRECQALILAPTRELAQQI 416
GKT FSI IL Q+ + + +ALI++PTRELA QI
Sbjct: 214 GKTLAFSIPILMQLKQPANKGFRALIISPTRELASQI 250
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +3
Query: 186 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR 365
KE + + + A G +P+ IQ+ AI P ++ +++I A +GTGKT F + ILQ +D +
Sbjct: 9 KEFIAKTLKAMGIHEPTKIQKEAIPPLLKQKNLIGVAPTGTGKTLAFLLPILQNLDFAQN 68
Query: 366 ECQALILAPTRELAQQIQXVV 428
QA+I+ PTRELA QI+ V+
Sbjct: 69 LIQAVIIVPTRELANQIKSVL 89
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 69.3 bits (162), Expect = 5e-11
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+ F D+ L LLR + G+ KP+ IQ ++I ++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLL 66
Query: 342 QQIDTSIRE-----CQALILAPTRELAQQI 416
++ + R + L+LAPTREL QI
Sbjct: 67 HRLAATPRPAPKNGARVLVLAPTRELVSQI 96
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 69.3 bits (162), Expect = 5e-11
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF++++L +LL I + KP+ IQ AI + +DV+A A +GTGKTA F + LQ
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
Query: 345 QI---DTSIRECQALILAPTRELAQQIQXVVDSL 437
+ R+ + LILAPTRELA QI VV L
Sbjct: 62 FLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQL 95
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 219 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 398
GF P+ IQ+ AI ++G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSH 88
Query: 399 ELAQQIQXVVD 431
ELA QI ++
Sbjct: 89 ELAMQIHQTIE 99
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 69.3 bits (162), Expect = 5e-11
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI--- 338
F ++ + E+ +GI GF + + IQ++A+ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 339 -LQQIDT-SIRECQALILAPTRELAQQIQXVVDSL 437
L Q T +ALILAPTREL QI+ +L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQAL 97
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 345 QIDTSIR----ECQALILAPTRELAQQIQXVVDS 434
+ + + +AL+L PTRELA Q+ V++
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVET 95
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 69.3 bits (162), Expect = 5e-11
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+T+ D+ L + LL+ + +E P+ IQ AI +QG+D++A + +G+GKTA F I IL
Sbjct: 190 KTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPIL 249
Query: 342 QQIDTS--IRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
Q+ S +ALI+ PTRELA QI V L T K AC+
Sbjct: 250 QKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYT---KLRACL 293
>UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
dbp-9 - Neurospora crassa
Length = 676
Score = 69.3 bits (162), Expect = 5e-11
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF D+ L L++ + FEKP+ +Q++AI + G+DV+ +A++G+GKTA + + +L
Sbjct: 96 TFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLS 155
Query: 345 QI-----DTSIRECQALILAPTRELAQQIQXVVDS 434
I ALIL PTRELA Q+ +D+
Sbjct: 156 GILKRKATDPTPFTSALILVPTRELADQVHKAIDA 190
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 68.9 bits (161), Expect = 6e-11
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +FDD+ L + L+G+ G+ KP+ IQ+ I + G+D++ AQ+G+GKT F I I
Sbjct: 50 INSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPI 109
Query: 339 LQQID----TSIRECQALILAPTRELAQQI 416
L+++ T + AL++ PTRELA QI
Sbjct: 110 LERLYCKQWTRLDGLGALVITPTRELAYQI 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,636,646
Number of Sequences: 1657284
Number of extensions: 11683333
Number of successful extensions: 36168
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 34284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35498
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -