Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B05f
(512 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 61 7e-12
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 0.69
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 23 1.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 23 1.6
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 4.9
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 21 4.9
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 6.4
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 6.4
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 6.4
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.5
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 21 8.5
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 60.9 bits (141), Expect = 7e-12
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +F+ L+ LL + G+ KP+AIQ+ AI + GRD+++ AQ+G+GKTA F + I
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPI 216
Query: 339 LQQI---------DTSIRECQALILAPTRELAQQI 416
+ + + + + +I++PTRELA QI
Sbjct: 217 IHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQI 251
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.2 bits (50), Expect = 0.69
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Frame = +3
Query: 18 GNMSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 167
G + ++ ER+ DWP E+ K G S+ P P P + W T
Sbjct: 1133 GGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 23.4 bits (48), Expect = 1.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 18 GNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDP 128
G + Y+ S DWPE + +G K D P G P
Sbjct: 130 GGLLYNERTHSCDWPE-NVDGCQKHPLCNDDPNGNVP 165
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 6 IRHEGNMSYSSERRSEDWP 62
IRH G +YS + E +P
Sbjct: 70 IRHHGQWNYSPDNHFEQYP 88
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 120 FPEVHRNYLDPSMAHFW 70
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -1
Query: 191 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 81
FF+ ++I G +N + + V + + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 6.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 94 KVVTMDLREWTLGHLT 141
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 6.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 94 KVVTMDLREWTLGHLT 141
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.0 bits (42), Expect = 6.4
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -1
Query: 476 NASMAFSIQGDHQEAIHH 423
N S+ DHQ +HH
Sbjct: 332 NRCHPLSLSSDHQAMLHH 349
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 88 RIKVVTMDLREWTLGHLTPTGIKLSKP 168
R V DLR T G L T +SKP
Sbjct: 361 RSPVTPADLRLLTRGRLVLTVSSVSKP 387
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 282 HRVLGCKALLRV 247
HRVL CK+ L++
Sbjct: 141 HRVLSCKSALQM 152
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,904
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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