Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B05f
(512 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 6e-30
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 91 5e-19
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 91 5e-19
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 79 2e-15
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 77 1e-14
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 74 8e-14
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 68 5e-12
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 65 4e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 64 9e-11
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 60 1e-09
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 59 2e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 54 5e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 50 9e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 3e-06
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 47 8e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 47 8e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 47 1e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 36 0.015
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.42
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.97
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 30 1.3
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 30 1.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 3.0
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 3.0
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 3.9
SB_11269| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 28 5.2
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 5.2
SB_37925| Best HMM Match : SAP (HMM E-Value=0.065) 27 6.9
SB_1120| Best HMM Match : SAP (HMM E-Value=0.065) 27 6.9
SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_17119| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 27 9.1
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 155 bits (375), Expect = 3e-38
Identities = 89/145 (61%), Positives = 101/145 (69%), Gaps = 28/145 (19%)
Frame = +3
Query: 129 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ------------ 272
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 273 ----------GRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTREL 404
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+LAPTREL
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTREL 171
Query: 405 AQQIQXVVDSLLVITLNAKCHACIG 479
AQQIQ VV L ++ KCHACIG
Sbjct: 172 AQQIQKVV-LALGDYMHVKCHACIG 195
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 127 bits (306), Expect = 6e-30
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = +3
Query: 219 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 398
GFEKPSAIQQRAI P ++GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 399 ELAQQIQXVVDSLLVITLNAKCHACIG 479
ELA QIQ VV L ++ +CHACIG
Sbjct: 76 ELANQIQKVV-LALGDYMSVQCHACIG 101
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 91.1 bits (216), Expect = 5e-19
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 348 IDTSIRECQALILAPTRELAQQIQXV 425
DT+ QAL+L PTRELA Q +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQI 134
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 91.1 bits (216), Expect = 5e-19
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 348 IDTSIRECQALILAPTRELAQQIQXV 425
DT+ QAL+L PTRELA Q +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQI 134
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 79.0 bits (186), Expect = 2e-15
Identities = 42/87 (48%), Positives = 55/87 (63%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 348 IDTSIRECQALILAPTRELAQQIQXVV 428
+ T Q +IL PTRE+A Q++ V+
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVI 101
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 76.6 bits (180), Expect = 1e-14
Identities = 43/104 (41%), Positives = 54/104 (51%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++ + L++ TRELA QI + N K G
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFG 152
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 76.6 bits (180), Expect = 1e-14
Identities = 43/104 (41%), Positives = 54/104 (51%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++ + L++ TRELA QI + N K G
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFG 152
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 73.7 bits (173), Expect = 8e-14
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGKTATFSIS 335
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
+L ++D + Q + L+PT ELA+Q V +++
Sbjct: 163 MLSRVDATKPYPQVICLSPTYELARQTGKVAEAM 196
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 67.7 bits (158), Expect = 5e-12
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
+F + L + L+ A G +KP+ IQ + P +QGRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 345 QIDTSIRECQALILAPTRELAQQI 416
++ A++L PTRELA QI
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQI 91
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 339 LQ----QIDTSIRECQALILAPTRELAQQ 413
++ Q TS+ AL+++PTRELA Q
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQ 137
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 64.1 bits (149), Expect = 6e-11
Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 339 L-----QQIDTSIRECQALILAPTRELAQQI 416
L Q ++ R AL +APTRELA+QI
Sbjct: 538 LTSLIKQGLNAPPRSPLALCVAPTRELAKQI 568
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 63.7 bits (148), Expect = 9e-11
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Frame = +3
Query: 144 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 323
D + +E+F D+NL EL + F+ P+ IQ +++ + GRD+I A++G+GKT
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLA 125
Query: 324 FSISILQQIDTSIRECQ-----ALILAPTRELAQQIQXVVDSLL 440
+S+ + + T ALIL PTREL QQ+ V +L
Sbjct: 126 YSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEML 169
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 63.3 bits (147), Expect = 1e-10
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKTA F + +
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 339 LQQI------DTSIREC---QALILAPTRELAQQI 416
+ + +S E QA+ +APTRELA QI
Sbjct: 770 MTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 59.7 bits (138), Expect = 1e-09
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 9/96 (9%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GKTA F+I +
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPL 159
Query: 339 L---------QQIDTSIRECQALILAPTRELAQQIQ 419
L ++ + + + ALILAPTRELAQQI+
Sbjct: 160 LVWIMGLPKIERDNDADQGPYALILAPTRELAQQIE 195
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 330 ISILQQI---DTSIRECQALILAPTRELAQQ 413
+ IL+++ T + L++ PTRELA Q
Sbjct: 66 LPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +3
Query: 180 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQI 350
++ E+ L+GI GF + IQ ++I P ++GRD++ A++G+GKT F + +L ++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKL 637
Query: 351 DTSIRE-CQALILAPTRELAQQIQXVVDSLL 440
R +I++PTREL+ Q V LL
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLL 668
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 344
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+G+GKTA F I IL
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKTAAFLIPILS 935
Query: 345 QI 350
+I
Sbjct: 936 RI 937
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 54.4 bits (125), Expect = 5e-08
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Frame = +3
Query: 48 SEDWPEDSKNG--PSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYG 221
+E+ PE SK +KD+ +D G++P + D F + ++ + + G
Sbjct: 40 AEEQPEVSKKKRKTAKDESEFD--EGVEPSVAQREGD-----FSKFRISQKTIDNLEDRG 92
Query: 222 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALI 383
IQ G DVI QA++GTGKT +F++ +++++ D + R + L+
Sbjct: 93 ITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLV 152
Query: 384 LAPTRELAQQIQXVVDSL 437
+APTRELA+Q+ ++L
Sbjct: 153 MAPTRELAKQVGNEFENL 170
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF----SI 332
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GKTA F +
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 333 SILQQIDTSIRECQ-ALILAPTRELAQQI 416
I+ Q + + + LI APTREL QQI
Sbjct: 578 HIMDQPELQVGDGPIVLICAPTRELCQQI 606
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 267 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQXVVDSL 437
+ G+DV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q Q + L
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKEL 374
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 20/104 (19%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISILQ 344
++ + + ++LR + GF KP+ IQ +I P + RD+I A++G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 345 QIDT--------------SIRECQ-----ALILAPTRELAQQIQ 419
I+ S E Q ALI+APTRELA Q++
Sbjct: 192 HIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 50.4 bits (115), Expect = 9e-07
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +3
Query: 276 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLN 455
+DVI A++G+GKT F++ ILQ + + + ALIL PTRELA QI ++ L +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEA-LGSGIG 60
Query: 456 AKCHACIG 479
KC +G
Sbjct: 61 VKCAVIVG 68
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 48.4 bits (110), Expect = 3e-06
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Frame = +3
Query: 117 GMDPG-TLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 287
G +P T D+D + Q V +F + L++++L+ + A +P+ IQ I I VI
Sbjct: 360 GQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVI 419
Query: 288 AQAQSGTGKTATFSISILQQ---------IDTSIRECQALILAPTRELAQQIQXVVDSL 437
AQ+G+GKT + ++ + I ++ +A I+ P RELA QI SL
Sbjct: 420 CAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSL 478
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +3
Query: 360 IRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+RE QAL+L+PTRELA QIQ VV L ++ +CHACIG
Sbjct: 1 LREPQALVLSPTRELANQIQKVV-LALGDYMSVQCHACIG 39
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F + + +L+ + G KP IQ++A+ + ++ ++++GTGK+ F +L
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVF---LLPS 218
Query: 348 IDTSIRECQALILAPTRELAQQIQXVVDSLL 440
+ R +I+ PTRELA Q+ V LL
Sbjct: 219 VQDPGRGYGTIIVVPTRELASQMLYEVSRLL 249
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 36.3 bits (80), Expect = 0.015
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI-LQ 344
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GK S + +Q
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKLLPSSPEMGVQ 257
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVVDSL 437
I + +I +L I VVD +
Sbjct: 258 VIVATPGRMVEIISRQAVDLTHVIGCVVDEV 288
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 39 ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 209
E+ +E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 210 YAYGFEKPSA 239
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 320
V+T+ ++ ++L + +EKP+ IQ +AI + GRD+IA + T + A
Sbjct: 104 VKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELA 157
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.5 bits (68), Expect = 0.42
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 219 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 359
G P+++Q+ ++GRDV A G+GK + + I+ QI S
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 0.97
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 302
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +3
Query: 81 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 254
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1228 PSDEVGTLESTQMCDKIYLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSSSA 1285
Query: 255 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 374
P + G D +I Q+ GKT SI QQ+DT RE Q
Sbjct: 1286 --PSLMGTDEIICQSLEHAGKTPPALSSISQQLDTR-REIQ 1323
Score = 28.7 bits (61), Expect = 3.0
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 225 EKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 374
+KP + A P + G D +I Q++ GKT SI QQ+DT RE Q
Sbjct: 1567 DKPPKVSFSA--PSLMGTDEIICQSREHAGKTPPALSSIPQQLDTG-REIQ 1614
Score = 27.9 bits (59), Expect = 5.2
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +3
Query: 81 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 254
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1810 PSDEVGTLESTQKFDEIDLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSFSA 1867
Query: 255 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDT--SIRE 368
P + G D +I Q+ GKT S QQ+DT IRE
Sbjct: 1868 --PSLMGTDEIICQSLEHAGKTPPALSSFSQQLDTRREIRE 1906
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 378 LILAPTRELAQQIQXVVDSL 437
L+L PTRELAQQ+Q V S+
Sbjct: 136 LVLCPTRELAQQVQEVAYSV 155
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 78 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 206
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 267 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 368
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 21 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGP 113
+M Y SER P D P+ D GS D P
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNP 1201
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +3
Query: 192 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 371
E+ + + GF A Q++A+M + G + +G GK+ + + S C
Sbjct: 512 EVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRS--PC 569
Query: 372 QALILAPTRELAQ 410
L+++P L +
Sbjct: 570 LTLVISPLVSLME 582
>SB_11269| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 817
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 344 TNRYKHS*MSSFDPGSHKRAGPTNSXGGG*PLGDHLE 454
T R K++ S G HK P GG +GDH+E
Sbjct: 114 TQRKKYTATLSDTEGYHKNRRPRRRTTGGTDIGDHVE 150
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 63 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 194
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 63 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 194
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 215 GVYASQQFFFEVHVIEGFDNLIPVGVKC 132
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_37925| Best HMM Match : SAP (HMM E-Value=0.065)
Length = 198
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 6 IRHEGNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGT 134
++H+ E++S W E+ K K + + PGM+P T
Sbjct: 99 LKHKEREKRKYEKKSTYWNEEIKTTRQKRRKTNTETPGMEPST 141
>SB_1120| Best HMM Match : SAP (HMM E-Value=0.065)
Length = 198
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 6 IRHEGNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGT 134
++H+ E++S W E+ K K + + PGM+P T
Sbjct: 99 LKHKEREKRKYEKKSTYWNEEIKTTRQKRRKTNTETPGMEPST 141
>SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
Frame = +3
Query: 75 NGPSKDQGSYDGPPGMDPGTLD-------TDWDQVVE 164
NGP+ D YD PP P T D T+WD ++
Sbjct: 340 NGPTSDNTDYDSPPRATP-TYDAPTRSTRTNWDPTID 375
>SB_17119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 222 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 374
F + AI+ + C+ R + G G + +I+IL + S RE Q
Sbjct: 147 FLEQQAIRDKLTFSCVDDRSKLKLYDEGAGLSLDKTITILSMKEASSRELQ 197
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -1
Query: 506 EYLQRTLVPPNASMAFSIQGDHQ---EAIHHXLNLLGQLSCGSQ--DQSLTFTNACIDLL 342
+YLQ L P M FS QG H+ + I H L +S SQ D SL + + LL
Sbjct: 1070 QYLQVDLEVPYRIMGFSTQGKHRMSDDTIGHAWVTLYNVSVSSQGYDWSLIHDESNVTLL 1129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,138,631
Number of Sequences: 59808
Number of extensions: 371101
Number of successful extensions: 1844
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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