Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B05f
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 159 1e-39
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 159 1e-39
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 155 1e-38
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 155 1e-38
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 99 2e-21
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 83 1e-16
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 74 7e-14
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 74 7e-14
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 74 7e-14
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 71 4e-13
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 71 4e-13
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 68 5e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 66 2e-11
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 60 9e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 60 9e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 60 9e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 59 2e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 59 2e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 59 2e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 56 1e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 56 2e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 55 3e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 55 3e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 55 3e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 54 5e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 54 5e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 6e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 8e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 51 4e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 51 4e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 51 4e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 8e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 8e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 42 2e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 38 0.004
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 34 0.052
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.052
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.21
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.28
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.37
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 31 0.48
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 2.0
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 2.6
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.6
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 28 4.5
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 28 4.5
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 27 7.9
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 27 7.9
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 159 bits (385), Expect = 1e-39
Identities = 80/117 (68%), Positives = 94/117 (80%)
Frame = +3
Query: 129 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 308
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 309 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
GKTATFS+SILQ+ID QAL++APTRELAQQIQ V+ S L LN CIG
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVM-SALGEYLNVNILPCIG 133
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 159 bits (385), Expect = 1e-39
Identities = 80/117 (68%), Positives = 94/117 (80%)
Frame = +3
Query: 129 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 308
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 309 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
GKTATFS+SILQ+ID QAL++APTRELAQQIQ V+ S L LN CIG
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVM-SALGEYLNVNILPCIG 133
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 155 bits (377), Expect = 1e-38
Identities = 77/108 (71%), Positives = 89/108 (82%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+LQ +DT +RE QALIL+PTRELA QIQ VV L +N +CHACIG
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVV-LALGDYMNVQCHACIG 130
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 155 bits (377), Expect = 1e-38
Identities = 77/108 (71%), Positives = 89/108 (82%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 336 ILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
+LQ +DT +RE QALIL+PTRELA QIQ VV L +N +CHACIG
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVV-LALGDYMNVQCHACIG 130
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/97 (51%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = +3
Query: 177 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 356
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 357 SIRECQALILAPTRELAQQIQXVVDSL-LVITLNAKC 464
Q ++LAP R +AQ+ + SL + +NA C
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATC 97
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/86 (40%), Positives = 60/86 (69%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 348 IDTSIRECQALILAPTRELAQQIQXV 425
I +++ QA+++ PTRELA Q +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQI 130
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 74.9 bits (176), Expect = 3e-14
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
++L +ID ++ Q + LAPT ELA+QI VV+ + N K H I
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 315
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 74.9 bits (176), Expect = 3e-14
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
++L +ID ++ Q + LAPT ELA+QI VV+ + N K H I
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 340
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 74.9 bits (176), Expect = 3e-14
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 332
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 333 SILQQIDTSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACI 476
++L +ID ++ Q + LAPT ELA+QI VV+ + N K H I
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAI 724
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/83 (48%), Positives = 49/83 (59%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++ E + + TRELA QI
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQI 125
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/83 (48%), Positives = 49/83 (59%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++ E + + TRELA QI
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQI 125
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 73.7 bits (173), Expect = 7e-14
Identities = 40/83 (48%), Positives = 49/83 (59%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 348 IDTSIRECQALILAPTRELAQQI 416
++ E + + TRELA QI
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQI 124
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/88 (37%), Positives = 56/88 (63%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVV 428
+D+ Q +I+ PTRE++ QI+ V
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETV 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/88 (37%), Positives = 56/88 (63%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 345 QIDTSIRECQALILAPTRELAQQIQXVV 428
+D+ Q +I+ PTRE++ QI+ V
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETV 110
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/100 (37%), Positives = 58/100 (58%)
Frame = +3
Query: 138 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 317
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 318 ATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSL 437
F+I +LQ + + L+L PTRELA QI ++L
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEAL 135
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 67.7 bits (158), Expect = 5e-12
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +3
Query: 63 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 236
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 237 AIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELA 407
IQQ I + G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELA 232
Query: 408 QQIQXVVDSL 437
Q+ V L
Sbjct: 233 IQVFQVFRKL 242
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 65.7 bits (153), Expect = 2e-11
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 344
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 345 QID-TSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIGWHQ 488
++ +AL+++PTRELA Q VV L T +C +G Q
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT-GLRCACLVGGDQ 132
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 65.7 bits (153), Expect = 2e-11
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 344
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 345 QID-TSIRECQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIGWHQ 488
++ +AL+++PTRELA Q VV L T +C +G Q
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT-GLRCACLVGGDQ 132
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.1 bits (139), Expect = 9e-10
Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Frame = +3
Query: 126 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 305
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 306 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQI 416
+GKT F I ++Q++ D S+ A+I+APT+EL QI
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQI 179
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 60.1 bits (139), Expect = 9e-10
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Frame = +3
Query: 15 EGNMSYSSERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE 191
+G E + D E+ G D+ S D P P + D + + F + +
Sbjct: 42 DGEDVEDEEDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCS 98
Query: 192 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 371
+ + + + + +Q I ++G D++ A++GTGKT F+I ILQ++
Sbjct: 99 WITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGI 158
Query: 372 QALILAPTRELAQQIQXVVDSL-LVITLNAKCHACIG 479
ALIL PTRELA QI +L ITL KC +G
Sbjct: 159 YALILTPTRELAFQIAEQFTALGKPITL--KCSVIVG 193
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 60.1 bits (139), Expect = 9e-10
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Frame = +3
Query: 15 EGNMSYSSERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE 191
+G E + D E+ G D+ S D P P + D + + F + +
Sbjct: 42 DGEDVEDEEDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCS 98
Query: 192 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 371
+ + + + + +Q I ++G D++ A++GTGKT F+I ILQ++
Sbjct: 99 WITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGI 158
Query: 372 QALILAPTRELAQQIQXVVDSL-LVITLNAKCHACIG 479
ALIL PTRELA QI +L ITL KC +G
Sbjct: 159 YALILTPTRELAFQIAEQFTALGKPITL--KCSVIVG 193
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 10/97 (10%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 339 LQQIDTSIRECQ----------ALILAPTRELAQQIQ 419
L I TS+ + + A+I+APTRELAQQI+
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 342 QQI--DTSIREC-------QALILAPTRELAQQI 416
++ D ++ + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 342 QQI--DTSIREC-------QALILAPTRELAQQI 416
++ D ++ + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 342 QQI--DTSIREC-------QALILAPTRELAQQI 416
++ D ++ + +IL PTRELA QI
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +3
Query: 195 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 365
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 366 E-CQALILAPTRELAQQIQXVVDSLL 440
+I++PTREL+ Q V+ LL
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELL 164
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 56.0 bits (129), Expect = 1e-08
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Frame = +3
Query: 33 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE------E 194
SS ++SE+ E + P K+Q G D G + + D K+ E
Sbjct: 107 SSAKKSENATETTTEKP-KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFLPNE 165
Query: 195 LLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI------- 350
+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 351 ----DTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
T +R +ALI+APTREL QI +++L+ T
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTT 262
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Frame = +3
Query: 144 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 323
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 324 FSISILQQI--DTSIRECQ---ALILAPTRELAQQ 413
F + + + I + E A+ILAPTRELA Q
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQ 392
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 342 QQI--DTSIREC-------QALILAPTRELAQQI 416
++ + + + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 342 QQI--DTSIREC-------QALILAPTRELAQQI 416
++ + + + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 54.8 bits (126), Expect = 3e-08
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Frame = +3
Query: 162 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 342 QQI--DTSIREC-------QALILAPTRELAQQI 416
++ + + + +IL PTREL QI
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 54.4 bits (125), Expect = 5e-08
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Frame = +3
Query: 153 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 332
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 333 SILQQI----DTSIRE---C--QALILAPTRELAQQI 416
I+ ++ D + C + +IL PTRELA QI
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 54.4 bits (125), Expect = 5e-08
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Frame = +3
Query: 153 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 332
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 333 SILQQI----DTSIRE---C--QALILAPTRELAQQI 416
I+ ++ D + C + +IL PTRELA QI
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 54.0 bits (124), Expect = 6e-08
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Frame = +3
Query: 219 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 374
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 375 ---ALILAPTRELAQQIQXVV 428
L+L+PTRELAQQI+ V
Sbjct: 163 SPFVLVLSPTRELAQQIEGEV 183
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 53.6 bits (123), Expect = 8e-08
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 17/108 (15%)
Frame = +3
Query: 144 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 320
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 321 TFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELAQQI 416
F + +ILQ + S+ R+ Q AL+L+PTREL+ QI
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Frame = +3
Query: 216 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----A 377
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 378 LILAPTRELAQQIQXV-VDSLLVITLNAKC 464
L+L PTRELAQQ+Q V +D + L C
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTC 235
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 52.4 bits (120), Expect = 2e-07
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Frame = +3
Query: 165 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF----SI 332
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 333 SILQQIDTSIRECQ-ALILAPTRELAQQI-QXVVDSLLVITLNAKC 464
I+ Q D E A+I+ PTRELA Q+ Q V +N C
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPIC 371
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 339 LQQI------------DTSIRECQ---ALILAPTRELAQQI 416
+Q I T+ R AL+L+PTRELA QI
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 339 LQQI------------DTSIRECQ---ALILAPTRELAQQI 416
+Q I T+ R AL+L+PTRELA QI
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 338
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 339 LQQI------------DTSIRECQ---ALILAPTRELAQQI 416
+Q I T+ R AL+L+PTRELA QI
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Frame = +3
Query: 207 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 350
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 351 DTSIRECQALILAPTRELAQQIQXVVDSLLVIT 449
T +R +ALI+APTREL QI +++L+ T
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTT 95
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 347
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 348 IDTSIRE----CQALILAPTRELAQQIQXVVDSL 437
+ + ALI++PTRELA Q ++++
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAV 171
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Frame = +3
Query: 156 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 336 ILQQI----------DTSIRECQALILAPTRELAQQ 413
++ +I ++ + A++L PTRELA Q
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Frame = +3
Query: 150 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 329
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 330 ISILQQI-----DTSIRECQ-----ALILAPTRELAQQI 416
+ I+ +I +T + Q ALILAPTRELA QI
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +3
Query: 159 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 335
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 336 IL-----QQIDTSIRECQ---ALILAPTRELAQQI 416
++ Q++ + LI+ P+RELA+QI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.6 bits (98), Expect = 8e-05
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Frame = +3
Query: 165 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 342 QQI------DTSIRE----CQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++ D + + + LI+APTREL Q L T KC G
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET-GLKCGLAFG 850
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.6 bits (98), Expect = 8e-05
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Frame = +3
Query: 165 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 341
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 342 QQI------DTSIRE----CQALILAPTRELAQQIQXVVDSLLVITLNAKCHACIG 479
++ D + + + LI+APTREL Q L T KC G
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYET-GLKCGLAFG 850
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 168 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 344
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +3
Query: 279 DVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPTRELAQQIQXVV 428
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVI 100
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 34.3 bits (75), Expect = 0.052
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +3
Query: 234 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 413
+A+QQ +I +GR ++ +A +G GKT F ++ I+ +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 414 IQXVVDSLLVITLNAKCHACIGWHQC 491
+ S LV L +C +G QC
Sbjct: 174 LIMASTSALVDQLFNRCELILGL-QC 198
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.052
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 231 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 407
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 408 QQI 416
QI
Sbjct: 202 AQI 204
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +3
Query: 240 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 419
+QQ +I +GR ++ +A +G GKT F ++ I+ ++ Q+ T+ +
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 420 XVVDSLLVITLNAKCHACIGWHQC 491
S LV L +C +G QC
Sbjct: 76 MASTSALVDQLFNRCELILGL-QC 98
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 219 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 395
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 396 RELAQQI 416
++A ++
Sbjct: 1377 EDMATKV 1383
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 123 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 25
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 31.1 bits (67), Expect = 0.48
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 282 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQXVVDSLL 440
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + L
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTL 134
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 234 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 413
+A+QQ++I R ++ A +G GKT F ++ I+ ++RE L T
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRERPLLTNISTTPSPTI 172
Query: 414 IQXVVDSLLVITLNAKCHACIG 479
+ + LV L +C +G
Sbjct: 173 LILANTNSLVEQLFNRCEVLLG 194
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 282 VIAQAQSGTGKTATFSISILQQIDTSIREC 371
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 93 DPSMAHFWNPLANLLTFFQTNKT 25
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 3 RIRHEGNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 155
R+R + N Y+SE +DW + +D GS G + D D+++
Sbjct: 1238 RVRRQVN--YASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 3 RIRHEGNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 155
R+R + N Y+SE +DW + +D GS G + D D+++
Sbjct: 1238 RVRRQVN--YASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 36 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 176
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 3 RIRHEGNMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 155
R+R + N Y+SE +DW + +D GS G + D D+++
Sbjct: 1238 RVRRQVN--YASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 393 WEPGSKLDIHECLYRFVVESI*RK 322
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 243 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 413
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 414 IQXVVDSLL 440
+ S L
Sbjct: 357 QAASISSYL 365
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 243 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 413
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 414 IQXVVDSLL 440
+ S L
Sbjct: 357 QAASISSYL 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,539,658
Number of Sequences: 27780
Number of extensions: 272484
Number of successful extensions: 875
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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