Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B04f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004985C1 Cluster: hypothetical protein 86.t00009; ...    33   5.2  
UniRef50_A5CA92 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A0DSV2 Cluster: Chromosome undetermined scaffold_62, wh...    32   9.2  

>UniRef50_UPI00004985C1 Cluster: hypothetical protein 86.t00009;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 86.t00009 - Entamoeba histolytica HM-1:IMSS
          Length = 219

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +2

Query: 83  LKPLFRNDRSKKL-IIESNKLIYEHLHKPNRI 175
           LKP+  +DR K+L +I+ NK++ EH  K N +
Sbjct: 17  LKPIENSDRRKRLYVIQLNKMLVEHFRKGNNL 48


>UniRef50_A5CA92 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 445

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -2

Query: 496 HGLKINIKISTMILIKFDYYNRYTFKKILINKVQLQ*AQLYYKLFSKMLPV 344
           HG   N+   T+++ KF++Y    F       V L   QL + L S  LPV
Sbjct: 340 HGNPTNMMTKTLLIAKFEHYLNLAFGTAAFKGVPLNVVQLNWCLLSFALPV 390


>UniRef50_A0DSV2 Cluster: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_62,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 333

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 94  ISKRSLQEINNRIQQAHLRTSTQTKSNL*AKRNYLIVSCNVLNYRVD 234
           IS  ++ +  + ++  ++R   QT  +L AKRNY  +   ++NY VD
Sbjct: 245 ISDETIVKAKDIVKSVYIRQIGQTGLHLAAKRNYYDICQELINYNVD 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,775,588
Number of Sequences: 1657284
Number of extensions: 6711195
Number of successful extensions: 15327
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15313
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)