Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 294 YILFYTFLIIATLTYFY 344
           Y  +Y F+I+  + YFY
Sbjct: 101 YYFYYAFIILLCVYYFY 117



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 288 YAYILFYTFLIIATLTYFY 344
           YA+ILF   L++    Y++
Sbjct: 243 YAFILFTVHLLLLVCIYYF 261


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 247 NDLKSLLGNLE 215
           NDLK+LL NLE
Sbjct: 133 NDLKTLLSNLE 143


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -2

Query: 247 NDLKSLLGNLE 215
           NDLK+LL NLE
Sbjct: 89  NDLKTLLSNLE 99


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 138 LLDSIINFLERSF--RNKGFNQSPRLHFDSTLKLNNVIN 28
           LL S+IN L RSF  R K  NQ      + +  +  ++N
Sbjct: 184 LLISLINILIRSFKSRYKDLNQKLETACEQSKSVEELMN 222


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory
          receptor candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 12 MQFIYRLSHYLTLVLN 59
          ++ +Y+LSH+L++  N
Sbjct: 13 LKVMYKLSHFLSITPN 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,929
Number of Sequences: 336
Number of extensions: 1923
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)