Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    26   0.18 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   6.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.7  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 414 YVMWRVAGASVSYLTDDLRRRQLAYITALSGKTE 515
           +++W + G        DL RR++A +  L+ K E
Sbjct: 251 FILWHIVGTFSGIFLCDLIRREIANVQVLAYKIE 284


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 90  MVDIAILLGADKTKATEELKESLQF 164
           MV ++I+LG+ KTK   +L    Q+
Sbjct: 90  MVLVSIILGSLKTKEWAKLNNKFQY 114


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 120 DKTKATEELKESLQFEMKLANISLPLEKRRN 212
           DK  +TE+L     ++  L + SL L +RR+
Sbjct: 474 DKLSSTEQLFIRPMYDAFLIDQSLALNRRRD 504


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 120 DKTKATEELKESLQFEMKLANISLPLEKRRN 212
           DK  +TE+L     ++  L + SL L +RR+
Sbjct: 474 DKLSSTEQLFIRPMYDAFLIDQSLALNRRRD 504


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 135 TEELKESLQFEMKLANISLPLEKRRNA 215
           TEE+K+ LQ    +AN  L    + NA
Sbjct: 34  TEEIKDLLQKYPPIANCKLVQAPKLNA 60


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 115 ELIRQRLQKNLKNHCN 162
           E I ++ ++NLK+H N
Sbjct: 372 EEIHEKARENLKHHAN 387


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 225 YNPMTIAELQQKFPKVPWL 281
           Y  M I+E  +K+P  P+L
Sbjct: 348 YLDMVISETLRKYPLAPFL 366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +3

Query: 228  NPMTIAELQQKFPKVPWLEYINRLLAPHITVDVNELTIVSVPKY 359
            +P+T   ++ K  KV W     R+L P    +    T+     Y
Sbjct: 924  SPITRYMIEYKQSKVSWEGNTERVLVPGDQTEAGVFTLRPATTY 967


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 64  NWYKHTMSTWSISLYSLELIRQRLQ 138
           N Y H     ++  YSL+L+ Q++Q
Sbjct: 329 NNYFHMDLENNVQSYSLQLLHQKVQ 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,686
Number of Sequences: 336
Number of extensions: 2405
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)