Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B03f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0230 + 27029725-27030871,27030995-27031113,27031225-270313...    29   3.0  
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558...    27   6.9  
09_03_0148 + 12770010-12770266,12772172-12772314,12773214-127735...    27   6.9  
08_02_1013 + 23554996-23555139,23555456-23555541,23556375-235563...    27   9.1  

>02_05_0230 +
           27029725-27030871,27030995-27031113,27031225-27031349,
           27031491-27031590,27031680-27031757,27032818-27032901,
           27033077-27033162,27033869-27034049,27034596-27034646
          Length = 656

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 431 NSPHDVVSLYTFRSLLQ*SLKIGDVFGYADNGK 333
           N PH V+  YT+ SL Q  LK        D+G+
Sbjct: 490 NIPHSVIKFYTYESLKQFMLKSAPANANLDSGQ 522


>09_04_0151 -
           15154063-15154296,15155616-15155660,15155749-15155820,
           15155932-15156024,15156282-15156351,15156716-15156912,
           15156946-15157215,15158620-15158757,15158841-15158930,
           15159041-15159247,15159987-15160154,15160300-15160503,
           15160584-15160670,15160748-15160861,15161689-15161835,
           15161914-15162063,15162211-15162276,15162376-15162480,
           15162625-15162798,15162930-15163154,15163534-15163590,
           15163858-15164019,15164234-15164302,15164391-15164471,
           15164823-15164925,15165011-15165156,15165285-15165359,
           15165441-15165508,15165586-15165667,15165745-15165858,
           15166358-15166476,15166692-15166781,15166862-15166988
          Length = 1382

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 84  EYMVDIAILLGADKTKATEELKESLQFEMKLANISLPLEKRRNA 215
           E + D A+L    + K  EEL+  L+ E++   ISL LE+ + A
Sbjct: 335 EILTDAALL--KRQRKEIEELRAKLRSELEKERISLELEEEKKA 376


>09_03_0148 +
           12770010-12770266,12772172-12772314,12773214-12773596,
           12773895-12773971,12774061-12774211
          Length = 336

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 45  NRGFSDKLVQAYYEYMV-DIAILLGADKTKATEELKESLQF 164
           +RGFS + V  +  Y + D   LLG D+  A EE++ +  F
Sbjct: 128 DRGFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNF 168


>08_02_1013 +
           23554996-23555139,23555456-23555541,23556375-23556399,
           23556655-23556711,23556795-23556852,23557767-23558614,
           23558862-23558921
          Length = 425

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 61  INWYKHTMSTWSISLYSLELIRQRLQKNLKNH 156
           I W KHT S W   +     I  + +K  K+H
Sbjct: 35  ITWVKHTGSWWPAQVVENSCISSKPKKTAKHH 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,590,538
Number of Sequences: 37544
Number of extensions: 260150
Number of successful extensions: 553
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)