Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37699| Best HMM Match : Peptidase_M13_N (HMM E-Value=0) 63 1e-10
SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-10
SB_24401| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_43957| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.6e-13) 48 4e-06
SB_25725| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_15478| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_46387| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_31479| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.60028e... 34 0.062
SB_21331| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_17188| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_43723| Best HMM Match : PilP (HMM E-Value=7.4) 32 0.25
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 31 0.44
SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.3
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 29 3.1
SB_2947| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_16297| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_14175| Best HMM Match : GBP_repeat (HMM E-Value=3.8) 28 5.4
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44) 28 5.4
SB_45344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24) 27 7.1
SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05) 27 7.1
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 27 9.4
SB_24188| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_37699| Best HMM Match : Peptidase_M13_N (HMM E-Value=0)
Length = 876
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +3
Query: 240 IAELQQKFPKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLEKTPKRVQANYV 419
I +L+ K WL+++N++ AP D ++ + ++P Y+ + L+E TPKRV +NYV
Sbjct: 490 IIDLETKLANYDWLDHLNKMFAPEKIKDSEQIIVPALP-YLKKMIKLIENTPKRVLSNYV 548
Query: 420 MWRVAGASVSYLTDDLRRRQLAY 488
+W V VS+L+ R +L Y
Sbjct: 549 VWNVIQDEVSFLSKPYRDVRLRY 571
>SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 47.2 bits (107), Expect = 8e-06
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +3
Query: 264 PKVPWLEYINRLLAP-HITVDVNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGA 440
P+ PW++++ +L AP IT D IV Y+ L L++KT K V ++Y+MWR+
Sbjct: 311 PEFPWMDHLKKLFAPKEITNDTK--VIVLANDYLPRLFRLIKKTNKDVLSDYMMWRLVKD 368
Query: 441 SVSYLTDDLRR 473
V L++ R+
Sbjct: 369 VVPLLSNKFRK 379
Score = 45.6 bits (103), Expect(2) = 3e-10
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 240 IAELQQKFPKVPWLEYINRLLAP-HITVDVNELTIVSVPKYITDLEALLEKTPKRVQANY 416
+ + + K PW++++ +L AP IT D IV Y+ L LL T K V ++Y
Sbjct: 984 LLKFEAKIALFPWMDHLKKLFAPKEITEDTK--VIVLANDYLPKLFELLRNTDKDVLSDY 1041
Query: 417 VMWRVAGASVSYLTDDLRR 473
+MWR+ V L++ R+
Sbjct: 1042 MMWRLVKDVVPLLSNKFRK 1060
Score = 36.3 bits (80), Expect(2) = 3e-10
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 6 LDQASLGLSREYLNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLA 179
+DQA+L L + + S K+V+ YM D+ L G DK ++ E L+FE K+A
Sbjct: 937 VDQATLNLPQ--IVYFTSPKIVKTVRNYMTDVICLAGYDKKDVKRKVHELLKFEAKIA 992
>SB_24401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Frame = +3
Query: 63 KLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMK-LANISLPLEKRRNATSLYNPMT 239
KL YY ++ + D +T L + + ++ +A ++ L + NAT
Sbjct: 160 KLQSTYYPASPFFSVEVTNDHLNSTRHLIKMVDTYVEYMAKVATLLGIKGNATK--EMRK 217
Query: 240 IAELQQKFPKVPWLEYINRLL-APHITVDVNELTIVSVPKYITDLEALLEKTPKRVQANY 416
I + + K PWL+++ + H+T D ++ + + Y++ + ++++TPK + +NY
Sbjct: 218 IVDFETKLANFPWLKHMQAIFRGAHVT-DA-DVVLATPSTYLSKMNDIIKETPKELLSNY 275
Query: 417 VMWRVAGASVSYLTDDLRRRQLAYITALSGKTERE 521
V+W++ +S L+ R+ + + +SG E+E
Sbjct: 276 VVWQMIRDKISLLSKPFRKARAVFNHKISGVKEQE 310
>SB_43957| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.6e-13)
Length = 560
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 183 ISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLL-APHITVDVNELTIVSVPKY 359
++L + ++ SL I + ++K + W+ ++ + + E +V Y
Sbjct: 214 VNLTMTLGGDSHSLREMEDIYKFEKKLANIDWMRFLTGVFRGVDYKIMEEEEVVVYAYDY 273
Query: 360 ITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRR 473
+ L +LEKTPK+ ANY+MWRV L+ + R+
Sbjct: 274 LVKLAKILEKTPKKTLANYIMWRVVKIQYVQLSKEYRK 311
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 3 DLDQASLGLSREYLNRGFSD--KLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKL 176
+LDQ+ G+S R S K+ AY E MV++ + LG D + + E+++ +FE KL
Sbjct: 182 NLDQSYPGISHRAFTRNSSTYRKMRHAYKELMVNLTMTLGGD-SHSLREMEDIYKFEKKL 240
Query: 177 ANI 185
ANI
Sbjct: 241 ANI 243
>SB_25725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +3
Query: 63 KLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLANISLPLEKRRNATSLYNPMTI 242
K V+ Y EY+ ++ +LGA + T+ + + L E +A + +P R + LY M++
Sbjct: 167 KAVELYIEYIANMTSMLGASRDH-TDNIHKFLDIEKHIAKLVVPF-YRYDKDKLYRKMSL 224
Query: 243 AELQQ-KFP-KVPWLEYINRLL-APHITVDVNELTIVSVPKYITDLEALLEKTPKR 401
EL++ +P K+ W Y+ + + ++ ++ IV Y+ ++ L+ + R
Sbjct: 225 DELRRLTYPSKLDWHRYVKGVYGSVERSISKDQEIIVYGVDYMREVNKLMNQFSNR 280
>SB_15478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 72 QAYYEYMVDIAILLGADKTKATEELKESLQFEMKLA 179
QAY +YM D+A+LLGAD A + E FE KLA
Sbjct: 3 QAYKQYMKDVAMLLGADSKTAQGMMMEVYHFEEKLA 38
>SB_46387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +3
Query: 132 ATEELKESLQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLLAP- 308
A +E + L MK NI+ L + A + + P I +++ K+ W + + +
Sbjct: 196 AGKEARNKLLGLMK--NITNALGADQVALAKWLPQVI-RFERRLEKIDWQNLLQEIFSDT 252
Query: 309 HITVDVNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVA 434
+ N IV+ +Y + L+KTPK+ ANY+ W++A
Sbjct: 253 QYQITSNTKIIVNGLRYFKKMIKYLKKTPKQTIANYLTWKLA 294
>SB_31479| Best HMM Match : Peptidase_M13_N (HMM
E-Value=1.60028e-42)
Length = 627
Score = 34.3 bits (75), Expect = 0.062
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 15 ASLGLSREYLNRGFSDK--LVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLANIS 188
A+LG++ +Y DK + AYY+YM + LG K + ++ + FEMKLA I+
Sbjct: 352 ATLGMNYDYYLSEEQDKKQVRSAYYDYMTAVGKALGGSKGQL--KMADIYSFEMKLAKIA 409
>SB_21331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 66 LVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLANIS 188
+V+ +YM D+ L G DK+ ++ E L+FE K+A +S
Sbjct: 1 IVKTVRDYMTDVISLAGYDKSDVKRKVHELLKFEAKIALVS 41
>SB_17188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 AYYEYMVDIAILLGA-DKTKATEELKESLQFEMKLA 179
AY EYM + +LLG D+T ++++E L+ E++LA
Sbjct: 4 AYLEYMTRVGVLLGGKDETTVRDKMREVLRLEIQLA 39
>SB_43723| Best HMM Match : PilP (HMM E-Value=7.4)
Length = 267
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 VPWLEYINRLLAP-HITVDVNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVA 434
+ W + + + + N IV+ +Y + L+KTPK+ ANY+ W++A
Sbjct: 1 IDWQNLLQEIFSDTQYQITSNTKIIVNGLRYFKKMIKYLKKTPKQTIANYLTWKLA 56
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +3
Query: 309 HITVDVNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRV 431
++ D + + +P ++ L +L++ TPKR AN+++W++
Sbjct: 1444 YVVGDSTTVVVHGMP-FLKSLMSLIQSTPKRTLANFLVWQI 1483
>SB_41405| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2639
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 238 PLLNFNRNSPRFRGWNTSTDCLRHTLRSMLMNLPLSAYPNTSPILRLY 381
PL R RF+ W+ L+ L++ P+ AYP+ + +LY
Sbjct: 918 PLTRLTRKDVRFK-WSQDAQAAFDLLKRALVSAPILAYPDFNLTFQLY 964
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 12 QASLGLSREYLNRGFSDKLVQ----AYYEYMVDIAILLGADKTKATEELKESLQFEMKLA 179
Q + L R ++ G + K+ + + A L + TK EEL++++Q E++ A
Sbjct: 171 QGKIQLRRSAMDAGTNKKVEEEERLTRARIQAEAAERLAKEVTKTLEELRKTMQKELEDA 230
Query: 180 NISLPLEKRRNATSL 224
+ L EK+ + L
Sbjct: 231 KVKLEQEKKDSVKKL 245
>SB_2947| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +3
Query: 72 QAYYEYMVDIAILLGADKTKATEELKESLQFEMKLA 179
+ Y +YM D+ +LLG ++++A EE+ ES+ F ++ A
Sbjct: 3 KGYKKYMKDVLVLLGNNESRA-EEVSESI-FRVEFA 36
>SB_16297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 266 QGSVVGIHQQTACATHY 316
QGSV+GIH+Q C T Y
Sbjct: 249 QGSVLGIHKQVQCNTGY 265
>SB_14175| Best HMM Match : GBP_repeat (HMM E-Value=3.8)
Length = 300
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +3
Query: 273 PWLEYINRLLAPH-ITVDVNELTIVSVPKYITDLEALLEK---TPKRVQANYVMWRVAGA 440
P LEYI + +V+ + + P Y + L + T RV NY MW +
Sbjct: 45 PLLEYIQDVFQEQDFSVNKTDQILAYPPDYYKAVLLLYQNQTNTDPRVLDNYAMWSIIDD 104
Query: 441 SVSYLTDDLRRRQLAYITALSG 506
+S L + +A++ + G
Sbjct: 105 VISVLDSNYTNAYMAFMRSKVG 126
>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
Length = 2581
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 3 DLDQASLGLSREYLNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELKESL 158
++ +SL R L ++ +++ + Y V+ A L + KT+ ELK SL
Sbjct: 2283 EMSYSSLESKRRELETSYTLRVLGRTFSYGVEFAHLNHSSKTRTHHELKSSL 2334
>SB_45344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 224 LQPYDHC*TSTEIPQGSVVGIHQQTACATHYGR 322
+Q D TSTE P+ + +H + AC+T Y R
Sbjct: 147 VQGLDRVFTSTEDPKEFNIELHNEMACSTIYPR 179
>SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24)
Length = 257
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 69 VQAYYEYMVDIAILLGADK-TKATEELKESLQFEMKLAN 182
V +Y+EY++ AIL G K + EEL S+Q +K ++
Sbjct: 102 VDSYFEYLLKGAILFGDPKLMEMFEELYGSIQKRLKFSD 140
>SB_21492| Best HMM Match : Ion_trans (HMM E-Value=1.3e-05)
Length = 1130
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 27 LSREYLNRGFSDKLVQAYYEYMV----DIAILLGADKTKATEELKESLQFEMKLANISLP 194
+ + +L+R +DKL + ++ YM+ D A + A+ T T + +S+ + + S
Sbjct: 247 IQKSFLHRFLTDKLCEGFFNYMMERMTDAAAEIKANITVQTSDTTQSVNKKSEKETSSKA 306
Query: 195 LEKRR 209
E RR
Sbjct: 307 EELRR 311
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 54 FSDKLVQAYYEYMVDIAILLGADKTKATEELKESLQFE 167
F D L Q Y E +V++ TK EELK++L+ E
Sbjct: 157 FGDILKQEYAEKLVELEKQFLEKYTKEIEELKQALEEE 194
>SB_24188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 484 ANCRLLRSSVRYETDAPATLHMT*LACTRLGVFSSKASRSVMYL 353
A+C LL ++++ E D+P LHMT +G+ +S S +YL
Sbjct: 354 ASCLLLANTLQ-EADSPWPLHMT----QMVGIHTSDLLESTLYL 392
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,396
Number of Sequences: 59808
Number of extensions: 315877
Number of successful extensions: 777
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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