Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B03f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 82 2e-16
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 82 2e-16
AF040652-4|AAB95021.2| 736|Caenorhabditis elegans Hypothetical ... 76 1e-14
Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical p... 61 4e-10
Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical p... 61 4e-10
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 35 0.031
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 31 0.50
Z82084-1|CAB04978.1| 398|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z81117-8|CAB03316.2| 334|Caenorhabditis elegans Hypothetical pr... 29 2.7
U29537-1|AAK31507.1| 610|Caenorhabditis elegans Vaccinia relate... 29 2.7
AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical ... 29 2.7
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81517-1|CAB04208.1| 520|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical ... 27 6.2
AY305840-1|AAR11985.1| 238|Caenorhabditis elegans nuclear recep... 27 8.1
AF016438-7|AAQ62454.1| 451|Caenorhabditis elegans Nuclear hormo... 27 8.1
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical
protein T16A9.4 protein.
Length = 769
Score = 83.0 bits (196), Expect = 1e-16
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +3
Query: 3 DLDQASLGLSREY-LNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLA 179
+LDQ G Y G +D +++ Y M A+ LGAD A +E+ E+++FE+KL
Sbjct: 247 ELDQPKWGAGSRYPYLSGANDPMLRNYTTLMKMTAVALGADPAIAEKEMNEAMEFELKLV 306
Query: 180 NISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLLAPHITVDVNELTIVSVPKY 359
N S RR+ N + +L+ FP + + +Y+ + + + N IV Y
Sbjct: 307 NFSADDMVRRDPERGNNRFELWQLKSVFPFINFEKYLKTVFKELVALSPNHTVIVREIDY 366
Query: 360 ITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLR 470
++ +L+ TPKRV ANY+ WR+ +L R
Sbjct: 367 FVGIQHVLQSTPKRVLANYISWRLVQGFSPFLPPSAR 403
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 82.2 bits (194), Expect = 2e-16
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Frame = +3
Query: 6 LDQASLGLSRE----YLNRGFSDKLVQAYYEYMVDIAILLGAD------KTKATEELKES 155
+DQ++L L R YLN + AY +Y+ IA LL D +++ ++++
Sbjct: 320 IDQSTLALGRGTRDYYLNTTLFSSHMTAYRKYLRQIAHLLKTDGNLTRSESEMNADIEKI 379
Query: 156 LQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLLAP----HITVD 323
+ FE++LA I + ++RRN T LYN I +L P+V W+ + + +AP H+ +
Sbjct: 380 IDFEIELAKIIVAEDERRNNTRLYNKRQIQDLYNLLPQVDWVPFF-QSIAPSDLTHLFHN 438
Query: 324 VNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITALS 503
E+ I + +Y+ + L+EKT + NYV+WRV ++V YL + + ++ ++
Sbjct: 439 ETEIIICEI-EYLQHVSELIEKTDVGLLTNYVLWRVVQSNVRYLDERFEDIKQDFLKVMT 497
Query: 504 GKTE 515
G+ +
Sbjct: 498 GQQQ 501
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 82.2 bits (194), Expect = 2e-16
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Frame = +3
Query: 6 LDQASLGLSRE----YLNRGFSDKLVQAYYEYMVDIAILLGAD------KTKATEELKES 155
+DQ++L L R YLN + AY +Y+ IA LL D +++ ++++
Sbjct: 320 IDQSTLALGRGTRDYYLNTTLFSSHMTAYRKYLRQIAHLLKTDGNLTRSESEMNADIEKI 379
Query: 156 LQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLLAP----HITVD 323
+ FE++LA I + ++RRN T LYN I +L P+V W+ + + +AP H+ +
Sbjct: 380 IDFEIELAKIIVAEDERRNNTRLYNKRQIQDLYNLLPQVDWVPFF-QSIAPSDLTHLFHN 438
Query: 324 VNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITALS 503
E+ I + +Y+ + L+EKT + NYV+WRV ++V YL + + ++ ++
Sbjct: 439 ETEIIICEI-EYLQHVSELIEKTDVGLLTNYVLWRVVQSNVRYLDERFEDIKQDFLKVMT 497
Query: 504 GKTE 515
G+ +
Sbjct: 498 GQQQ 501
>AF040652-4|AAB95021.2| 736|Caenorhabditis elegans Hypothetical
protein T05A8.4 protein.
Length = 736
Score = 76.2 bits (179), Expect = 1e-14
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Frame = +3
Query: 6 LDQASLGL-SREYLNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLAN 182
+DQ L L +R++ +++ + AY + + D+ ILL AD+T+AT + KE + FE LAN
Sbjct: 214 IDQPQLNLFARDFYVAAENEERM-AYLQLIRDVLILLDADRTRATLDAKEIIDFETALAN 272
Query: 183 ISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLL-------APHITVDVNELTI 341
I++ E R + LY +T+ E+++ P W + NR+ IT D N +
Sbjct: 273 ITMADEHRHDIAELYTKITLGEMRRSLPHFNWPLFFNRMFKDLHEKNGKRITFDDNTEVV 332
Query: 342 VSVPKYITDLEALLEKTPKRVQANYVMW 425
V +++ L+ L+ + R+ NY+ W
Sbjct: 333 VYGYEFLRRLDVLIPQYDNRLIVNYLEW 360
>Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 61.3 bits (142), Expect = 4e-10
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Frame = +3
Query: 9 DQASLGL---SREY-LNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELK------ESL 158
DQ SLGL +R+Y L+ +K ++AY +Y + D A E K E +
Sbjct: 226 DQGSLGLGYSTRDYYLDEKKYEKQMKAYRKYTIGKVRYYTEDAGMAVNESKIESDVDEII 285
Query: 159 QFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPW--LEYINRLLAPHITVDVNE 332
FE + A I + E RRN T LYN +L++ + W L H + N
Sbjct: 286 AFEKEWAQILVAEEDRRNYTKLYNVRRFDDLKEYMSIIDWKKLTLSTTPFLVHSYLKTNP 345
Query: 333 LTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITALSGKT 512
I+S +Y+ + LL+ T R+ NY++ R AG+ + Q + + G+
Sbjct: 346 SIIISDVEYLQKMNTLLQNTDPRIVTNYILLRWAGSWSQEIGKKYEDLQQEFAFQMYGRK 405
Query: 513 ERE 521
+R+
Sbjct: 406 QRQ 408
>Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 61.3 bits (142), Expect = 4e-10
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Frame = +3
Query: 9 DQASLGL---SREY-LNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELK------ESL 158
DQ SLGL +R+Y L+ +K ++AY +Y + D A E K E +
Sbjct: 226 DQGSLGLGYSTRDYYLDEKKYEKQMKAYRKYTIGKVRYYTEDAGMAVNESKIESDVDEII 285
Query: 159 QFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPW--LEYINRLLAPHITVDVNE 332
FE + A I + E RRN T LYN +L++ + W L H + N
Sbjct: 286 AFEKEWAQILVAEEDRRNYTKLYNVRRFDDLKEYMSIIDWKKLTLSTTPFLVHSYLKTNP 345
Query: 333 LTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDLRRRQLAYITALSGKT 512
I+S +Y+ + LL+ T R+ NY++ R AG+ + Q + + G+
Sbjct: 346 SIIISDVEYLQKMNTLLQNTDPRIVTNYILLRWAGSWSQEIGKKYEDLQQEFAFQMYGRK 405
Query: 513 ERE 521
+R+
Sbjct: 406 QRQ 408
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +3
Query: 111 LGADKTKATEELKESLQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYI 290
+GAD A + E + FE+++A S P + RN YNP IA + + W Y+
Sbjct: 269 VGADALLAAAQ--EVVNFEVQIAMASWPDDLLRNYQQQYNPYNIASATTAYRAINWKSYL 326
Query: 291 NRLL--APHITVDVNELTIVSVPKYITDLEALLE-KTP-KRVQANYVM 422
+L N +V+ P Y L ++ + KT V ANY++
Sbjct: 327 GQLFHGVASDADQANYNIVVTEPSYFAWLNSVFDGKTSNSTVVANYMI 374
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/134 (20%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Frame = +3
Query: 96 DIAILLGADKTKATEELKES----LQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKF 263
+++ +LG D T + + L++++ +A + EK+ Y + + ELQ+
Sbjct: 326 ELSAVLGFDSTDEKVRMMIANMIYLEYQITMAGSTFYKEKKER----YTVVMLRELQEIA 381
Query: 264 PKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLEKTPK-----RVQANYVMWR 428
P + W +++RL+ +++ + + + ++I L A++EK + V NYV W+
Sbjct: 382 PAINWHYFLSRLVGENLS-HSEPIALKTGTQWIPILSAIVEKLKQSRSGVAVLKNYVKWK 440
Query: 429 VAGASVSYLTDDLR 470
++Y + R
Sbjct: 441 TIMFHLAYASPKCR 454
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/134 (20%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Frame = +3
Query: 96 DIAILLGADKTKATEELKES----LQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKF 263
+++ +LG D T + + L++++ +A + EK+ Y + + ELQ+
Sbjct: 290 ELSAVLGFDSTDEKVRMMIANMIYLEYQITMAGSTFYKEKKER----YTVVMLRELQEIA 345
Query: 264 PKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLEKTPK-----RVQANYVMWR 428
P + W +++RL+ +++ + + + ++I L A++EK + V NYV W+
Sbjct: 346 PAINWHYFLSRLVGENLS-HSEPIALKTGTQWIPILSAIVEKLKQSRSGVAVLKNYVKWK 404
Query: 429 VAGASVSYLTDDLR 470
++Y + R
Sbjct: 405 TIMFHLAYASPKCR 418
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/134 (20%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Frame = +3
Query: 96 DIAILLGADKTKATEELKES----LQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKF 263
+++ +LG D T + + L++++ +A + EK+ Y + + ELQ+
Sbjct: 326 ELSAVLGFDSTDEKVRMMIANMIYLEYQITMAGSTFYKEKKER----YTVVMLRELQEIA 381
Query: 264 PKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLEKTPK-----RVQANYVMWR 428
P + W +++RL+ +++ + + + ++I L A++EK + V NYV W+
Sbjct: 382 PAINWHYFLSRLVGENLS-HSEPIALKTGTQWIPILSAIVEKLKQSRSGVAVLKNYVKWK 440
Query: 429 VAGASVSYLTDDLR 470
++Y + R
Sbjct: 441 TIMFHLAYASPKCR 454
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/134 (20%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Frame = +3
Query: 96 DIAILLGADKTKATEELKES----LQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKF 263
+++ +LG D T + + L++++ +A + EK+ Y + + ELQ+
Sbjct: 290 ELSAVLGFDSTDEKVRMMIANMIYLEYQITMAGSTFYKEKKER----YTVVMLRELQEIA 345
Query: 264 PKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLEKTPK-----RVQANYVMWR 428
P + W +++RL+ +++ + + + ++I L A++EK + V NYV W+
Sbjct: 346 PAINWHYFLSRLVGENLS-HSEPIALKTGTQWIPILSAIVEKLKQSRSGVAVLKNYVKWK 404
Query: 429 VAGASVSYLTDDLR 470
++Y + R
Sbjct: 405 TIMFHLAYASPKCR 418
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +3
Query: 141 ELKESLQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRLLAPHITV 320
E K+ M N+ + L P+ + ELQ++ PK +L N + + +
Sbjct: 123 EYKKLNNMVMNRMNLKVSLTFTSRRKGYTPPVILEELQERKPKPQFLNMSNMAITLNDNL 182
Query: 321 DVNELTIVSVPKY 359
+ + IV VPKY
Sbjct: 183 NNGKFGIVPVPKY 195
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = +3
Query: 234 MTIAELQQKFPKVPWLEYINRLLAP---HITVDVNELTIVSVPKYITD----LEALLEKT 392
M A L P V ++ + +++P H+ + T V D LEA++ T
Sbjct: 288 MKPAVLDDLVPSVDFMGLVKAMISPGKEHLMPKIELKTSVLNQTLFNDENMNLEAIILDT 347
Query: 393 PKRVQANYVMWRVAGASVSYL 455
PKR ANY+++ +S+ +L
Sbjct: 348 PKRTLANYLIFNFIDSSLDHL 368
>Z82084-1|CAB04978.1| 398|Caenorhabditis elegans Hypothetical
protein ZK1053.1 protein.
Length = 398
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 147 KESLQFEMKLANISLPLEKRRN-ATSLYNPMTIAELQQKFPKVPWLEYINRLLAPHI 314
K FE ++ N SL E N +T + + +AE+ Q+FP V W++ ++ P+I
Sbjct: 185 KNDKYFEFRVFNTSLYPEFVSNWSTYNFKAIVMAEMLQEFPAVWWIDAHIGVIKPNI 241
>Z81117-8|CAB03316.2| 334|Caenorhabditis elegans Hypothetical
protein T06E6.7 protein.
Length = 334
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 303 APHITVD-VNELTIVSVPKYITDLEALLEKTPKRVQANYVMWRVAGASVSYLTDDL 467
APHI V V+ + VS+P + + +L +TPK +++ V W + A + + DL
Sbjct: 3 APHIFVHYVHAIIFVSLPVQLFSIYCILFETPKTMKS--VKWSLLNARIWTVILDL 56
>U29537-1|AAK31507.1| 610|Caenorhabditis elegans Vaccinia related
kinase protein 1 protein.
Length = 610
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 240 IAELQQKFPKVPWLEYINRLLAPHITVDVNELTIVSVPKYITDLEALLE 386
+ E +K K+ W+ + + T + ++ + +PKY T LEA+ E
Sbjct: 85 LIESYKKKKKISWIGLPYLIANGYFTYESEKMRYMIIPKYATSLEAVRE 133
>AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical
protein K02F6.9 protein.
Length = 701
Score = 28.7 bits (61), Expect = 2.7
Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Frame = +3
Query: 120 DKTKATEELKESLQFEMKLANISLPLEKRRNATSLYNPMTIAELQQKFPKVPWLEYINRL 299
++T +E E +Q E + ++ + ++ + +L + P++ W++ + +
Sbjct: 220 NETIYDKEFAELVQLEANFSTLADYRNLALDNDNMSKSRNLTDLVKMIPEIDWIKIL-KA 278
Query: 300 LAPHITVDVNE------LTIVSVPKYI----TDLEALLEKTPKRVQANYVMWRVAGASVS 449
LA H T + +E +T+ +Y +L + +TPK ANY++ R
Sbjct: 279 LARHGTSEEDEEKLLERVTVHGAGEYFFGENRELARIATETPKSALANYLVVRQLIDVAL 338
Query: 450 YLTDDLRRRQ 479
Y D + RQ
Sbjct: 339 YFYDKDQPRQ 348
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 273 PWLEYINRLLAPHIT-VDVNELTIVSVPKY 359
PW Y++RL+ HIT D+ ++T K+
Sbjct: 256 PWFNYLDRLMGYHITYADLKKMTEAKFKKF 285
>Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical
protein F28B1.2 protein.
Length = 973
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 350 YADNGKFINIDRNVWRKQSVDVFQPRNLGEFLLKFSNG 237
+ NG + I+R V QS V QPR++G+F K NG
Sbjct: 703 FRSNGPPVYINRVV-ANQSTFVEQPRSIGDFGCKEHNG 739
>Z81517-1|CAB04208.1| 520|Caenorhabditis elegans Hypothetical
protein F28B1.1 protein.
Length = 520
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 350 YADNGKFINIDRNVWRKQSVDVFQPRNLGEFLLKFSNG 237
+ NG I I+R V QS V QPR++G+F K NG
Sbjct: 257 FRSNGPPIYINRVV-ANQSTFVEQPRSIGDFGCKEYNG 293
>AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical
protein F18A12.1 protein.
Length = 726
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 366 DLEALLEKTPKRVQANYVMW 425
+LE LL+ TPKR ANY+++
Sbjct: 351 NLEKLLKSTPKRTLANYLIF 370
>AY305840-1|AAR11985.1| 238|Caenorhabditis elegans nuclear receptor
NHR-128 protein.
Length = 238
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 357 YITDLEALLEKTPKRVQANYVMWRVA 434
Y+ LEAL+E P ++ NY++ +++
Sbjct: 126 YLKGLEALIELNPSSIEVNYMLLQLS 151
>AF016438-7|AAQ62454.1| 451|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 128, isoform b protein.
Length = 451
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 357 YITDLEALLEKTPKRVQANYVMWRVA 434
Y+ LEAL+E P ++ NY++ +++
Sbjct: 339 YLKGLEALIELNPSSIEVNYMLLQLS 364
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 36 EYLNRGFSDKLVQAYYEYMVDIAILLGADKTKATEELKESLQFEMKLAN 182
+Y N GF+++ Y E + I ++ A E L S++ LAN
Sbjct: 154 DYFNYGFTEETWNLYCERQKKLRIEFAGNQKAANEALFSSIKIANPLAN 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,632,039
Number of Sequences: 27780
Number of extensions: 232653
Number of successful extensions: 642
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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