Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303B02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 270 3e-73
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 269 1e-72
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 248 2e-66
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 220 6e-58
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 119 2e-27
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 60 1e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.58
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 1.8
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 1.8
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 3.1
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 5.4
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 5.4
SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13) 27 7.1
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 27 9.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 270 bits (663), Expect = 3e-73
Identities = 124/152 (81%), Positives = 137/152 (90%)
Frame = +1
Query: 64 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 243
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 244 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 423
MNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 424 SMVLTKMKETAEAYLGKTVQNAVITVPAYFND 519
SMVLTKMKETAEAYLG V +AV+TVPAYF+D
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHD 152
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 269 bits (659), Expect = 1e-72
Identities = 124/152 (81%), Positives = 139/152 (91%)
Frame = +1
Query: 64 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 243
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 244 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 423
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 424 SMVLTKMKETAEAYLGKTVQNAVITVPAYFND 519
SMVL KMKETAEAYLG+ V +AVITVPAYFND
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFND 152
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 248 bits (607), Expect = 2e-66
Identities = 126/177 (71%), Positives = 137/177 (77%), Gaps = 25/177 (14%)
Frame = +1
Query: 64 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 243
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 244 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV- 420
MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 421 ------------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 519
SSMVL KMKETAEAYLG V +AV+TVPAYFND
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +1
Query: 415 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 519
++SSMVL KMKETAEAYLG V +AV+TVPAYFND
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 245
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 220 bits (537), Expect = 6e-58
Identities = 104/147 (70%), Positives = 123/147 (83%), Gaps = 1/147 (0%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 258
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 259 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 438
T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 439 KMKETAEAYLGKTVQNAVITVPAYFND 519
KMKETAEAYLGK V +AV+TVPAYFND
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFND 850
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 119 bits (286), Expect = 2e-27
Identities = 63/152 (41%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Frame = +1
Query: 70 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 243
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 244 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEV 420
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 421 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 516
V+ K++ AE L TV AV++VPA F+
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEFD 181
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 247 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 423
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 424 SMVLTKMKETAEAYLGKTVQNAVITVPAYFND 519
+M+ T++K TAE L V + VI+VP+Y+ D
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTD 209
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 82 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 237
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/50 (54%), Positives = 39/50 (78%)
Frame = +1
Query: 370 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 519
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFND 51
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 133 GKVEIIANDQGNRTTPSYVAFTDTERLI 216
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 364 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFN 516
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFN 117
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 142 EIIANDQGNRTTPSYVAFT-DTERL 213
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 150 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 320
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 250 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 152
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 268 RILCCWGSSPPGSWRH 221
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 268 RILCCWGSSPPGSWRH 221
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 10 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 96
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 458 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 279
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 278 RLASNIVL 255
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 195 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 335
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 332 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 186
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
>SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13)
Length = 822
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 437 VSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMS-ACTVASSNLRPMRRLASNI 261
VST+++T G +L+ T LG+ + T S S T+ S +L PMRR +
Sbjct: 751 VSTVDVTLDGLYILAGT--TTGNLGVLNASTRSYTTLMRSHTSTITSMDLDPMRRHMGTV 808
Query: 260 VLLGFIATWFL 228
G I W L
Sbjct: 809 SADGTIRIWDL 819
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 195 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRH 323
H R +R+ + GG +EP + R T T C+CA R+
Sbjct: 1181 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDAETCFCAKRY 1226
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 226 AKNQVAMNPNNTIFDAKRLIGRKFEDATVQAD 321
AKNQ+ NP N + + L FED+ ++ D
Sbjct: 429 AKNQIGQNPTNHAKNQRYLKSIVFEDSLIRND 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,757,504
Number of Sequences: 59808
Number of extensions: 405589
Number of successful extensions: 1223
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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