Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303B01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros...    76   3e-14
BT021440-1|AAX33588.1| 1214|Drosophila melanogaster GH07101p pro...    28   6.7  
BT009939-1|AAQ22408.1| 1108|Drosophila melanogaster SD05496p pro...    28   6.7  
AY069524-1|AAL39669.1|  948|Drosophila melanogaster LD23883p pro...    28   6.7  
AE013599-2010|ABI31095.1|  640|Drosophila melanogaster CG11798-P...    28   6.7  
AE013599-2009|AAS64853.1| 1108|Drosophila melanogaster CG11798-P...    28   6.7  
AE013599-2008|AAF58171.1| 1108|Drosophila melanogaster CG11798-P...    28   6.7  
AE013599-2007|ABI31096.1| 1214|Drosophila melanogaster CG11798-P...    28   6.7  

>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
            Drosophila melanogasterDNA for type II retrotransposable
            element  R2Dm.  ).
          Length = 1057

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 45/136 (33%), Positives = 66/136 (48%)
 Frame = -2

Query: 517  LPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDSSPWLVARAAAKSDKIRKKL 338
            LP DVP A+ HA  + GGL IPS+R   P L +RR   +   P L     A S    +K 
Sbjct: 734  LPLDVPIAFVHAPPKSGGLGIPSLRWVAPMLRLRRLSNI-KWPHLTQNEVASSFLEAEKQ 792

Query: 337  RWAWKQLRRFSRVDSTTQRPSVRLFWREHLHASVDGRELRESTRTPTSTKWIRERCAQIT 158
            R    + R  +  +    RP++  +W   L+ SVDG  LRE         W+ +    +T
Sbjct: 793  R---ARDRLLAEQNELLSRPAIEKYWANKLYLSVDGSGLREGGHYGPQHGWVSQPTRLLT 849

Query: 157  GRDFVQFVHTHINALP 110
            G++++  +   INALP
Sbjct: 850  GKEYMDGIRLRINALP 865


>BT021440-1|AAX33588.1| 1214|Drosophila melanogaster GH07101p
           protein.
          Length = 1214

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 476 GGNGNGGSGSGLLKPKREKRFTCCY 500


>BT009939-1|AAQ22408.1| 1108|Drosophila melanogaster SD05496p
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 476 GGNGNGGSGSGLLKPKREKRFTCCY 500


>AY069524-1|AAL39669.1|  948|Drosophila melanogaster LD23883p
           protein.
          Length = 948

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 316 GGNGNGGSGSGLLKPKREKRFTCCY 340


>AE013599-2010|ABI31095.1|  640|Drosophila melanogaster CG11798-PD,
           isoform D protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 476 GGNGNGGSGSGLLKPKREKRFTCCY 500


>AE013599-2009|AAS64853.1| 1108|Drosophila melanogaster CG11798-PB,
           isoform B protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 476 GGNGNGGSGSGLLKPKREKRFTCCY 500


>AE013599-2008|AAF58171.1| 1108|Drosophila melanogaster CG11798-PA,
           isoform A protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 476 GGNGNGGSGSGLLKPKREKRFTCCY 500


>AE013599-2007|ABI31096.1| 1214|Drosophila melanogaster CG11798-PC,
           isoform C protein.
          Length = 1214

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 336 GGPGNSSAGSAVLTPQRNDHLCACF 262
           GG GN  +GS +L P+R      C+
Sbjct: 476 GGNGNGGSGSGLLKPKREKRFTCCY 500


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,927,932
Number of Sequences: 53049
Number of extensions: 614972
Number of successful extensions: 1941
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)