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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ133776-1|CAB45384.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
BC126468-1|AAI26469.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC117488-1|AAI17489.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC074939-1|AAH74939.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC074938-1|AAH74938.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC069098-1|AAH69098.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
AL450311-1|CAH72729.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
AF234829-1|AAK15022.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
M94132-1|AAA59164.1|  984|Homo sapiens MUC2 protein.                   31   3.2  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   3.2  
Z30425-1|CAA83016.1|  348|Homo sapiens orphan nuclear hormone re...    29   7.5  
DQ022681-1|AAY56401.1|  357|Homo sapiens nuclear receptor subfam...    29   7.5  
BC121121-1|AAI21122.1|  309|Homo sapiens nuclear receptor subfam...    29   7.5  
BC121120-1|AAI21121.1|  314|Homo sapiens nuclear receptor subfam...    29   7.5  
BC069651-1|AAH69651.1|  274|Homo sapiens NR1I3 protein protein.        29   7.5  
BC069626-1|AAH69626.1|  352|Homo sapiens nuclear receptor subfam...    29   7.5  
AY572827-1|AAT47180.1|  319|Homo sapiens constitutive androstane...    29   7.5  
AY572819-1|AAT47172.1|  321|Homo sapiens constitutive androstane...    29   7.5  
AY572818-1|AAT47171.1|  288|Homo sapiens constitutive androstane...    29   7.5  
AY572817-1|AAT47170.1|  293|Homo sapiens constitutive androstane...    29   7.5  
AY572816-1|AAT47169.1|  249|Homo sapiens constitutive androstane...    29   7.5  
AY572813-1|AAT47166.1|  278|Homo sapiens constitutive androstane...    29   7.5  
AY572812-1|AAT47165.1|  297|Homo sapiens constitutive androstane...    29   7.5  
AY572811-1|AAT47164.1|  324|Homo sapiens constitutive androstane...    29   7.5  
AY572810-1|AAT47163.1|  309|Homo sapiens constitutive androstane...    29   7.5  
AY572808-1|AAT47161.1|  280|Homo sapiens constitutive androstane...    29   7.5  
AY572806-1|AAT47159.1|  322|Homo sapiens constitutive androstane...    29   7.5  
AL590714-14|CAH72154.1|  348|Homo sapiens nuclear receptor subfa...    29   7.5  
AL590714-13|CAH72153.1|  352|Homo sapiens nuclear receptor subfa...    29   7.5  
AF263918-1|AAF73293.1|  910|Homo sapiens inner nuclear membrane ...    29   9.9  
AF112299-1|AAD31593.2|  911|Homo sapiens integral inner nuclear ...    29   9.9  

>AJ133776-1|CAB45384.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTPGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC126468-1|AAI26469.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC117488-1|AAI17489.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC074939-1|AAH74939.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC074938-1|AAH74938.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC069098-1|AAH69098.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>AL450311-1|CAH72729.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>AF234829-1|AAK15022.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 236 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 415
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 416 RRHFSEPPR 442
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>M94132-1|AAA59164.1|  984|Homo sapiens MUC2 protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 314 CTPCS*RRSPFGTVPAAAEIQAGGCSKS 397
           CTP +  R P  TVP   E+   GC+K+
Sbjct: 870 CTPRNETRVPCSTVPVTTEVSYAGCTKT 897


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 314  CTPCS*RRSPFGTVPAAAEIQAGGCSKS 397
            CTP +  R P  TVP   E+   GC+K+
Sbjct: 5065 CTPRNETRVPCSTVPVTTEVSYAGCTKT 5092


>Z30425-1|CAA83016.1|  348|Homo sapiens orphan nuclear hormone
           receptor protein.
          Length = 348

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>DQ022681-1|AAY56401.1|  357|Homo sapiens nuclear receptor subfamily
           1, group I, member 3 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>BC121121-1|AAI21122.1|  309|Homo sapiens nuclear receptor subfamily
           1, group I, member 3 protein.
          Length = 309

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>BC121120-1|AAI21121.1|  314|Homo sapiens nuclear receptor subfamily
           1, group I, member 3 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>BC069651-1|AAH69651.1|  274|Homo sapiens NR1I3 protein protein.
          Length = 274

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>BC069626-1|AAH69626.1|  352|Homo sapiens nuclear receptor subfamily
           1, group I, member 3 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AY572827-1|AAT47180.1|  319|Homo sapiens constitutive androstane
           receptor SV22 protein.
          Length = 319

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572819-1|AAT47172.1|  321|Homo sapiens constitutive androstane
           receptor SV14 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AY572818-1|AAT47171.1|  288|Homo sapiens constitutive androstane
           receptor SV13 protein.
          Length = 288

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572817-1|AAT47170.1|  293|Homo sapiens constitutive androstane
           receptor SV12 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572816-1|AAT47169.1|  249|Homo sapiens constitutive androstane
           receptor SV11 protein.
          Length = 249

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572813-1|AAT47166.1|  278|Homo sapiens constitutive androstane
           receptor SV8 protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AY572812-1|AAT47165.1|  297|Homo sapiens constitutive androstane
           receptor SV7 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572811-1|AAT47164.1|  324|Homo sapiens constitutive androstane
           receptor SV6 protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572810-1|AAT47163.1|  309|Homo sapiens constitutive androstane
           receptor SV5 protein.
          Length = 309

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AY572808-1|AAT47161.1|  280|Homo sapiens constitutive androstane
           receptor SV3 protein.
          Length = 280

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 52  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 106


>AY572806-1|AAT47159.1|  322|Homo sapiens constitutive androstane
           receptor SV1 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AL590714-14|CAH72154.1|  348|Homo sapiens nuclear receptor
           subfamily 1, group I, member 3 protein.
          Length = 348

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AL590714-13|CAH72153.1|  352|Homo sapiens nuclear receptor
           subfamily 1, group I, member 3 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +3

Query: 291 VLVLKTGGVRHVPDVVLRLELYPLQLRSRQEDVVRAL---RTHHFGVTFRSLLEF 446
           +L  +   +R       R +  P+QL   QE+++R L    T H G  F   ++F
Sbjct: 81  ILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQF 135


>AF263918-1|AAF73293.1|  910|Homo sapiens inner nuclear membrane
           protein protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -3

Query: 438 GGSEK*RRSGEFAGLLLHPPAWISAAAGTVPNG-ERRQEH---GVHRPSSVQERRP 283
           GG  K R S ++ GL   PPA ++A+  T  N  ERR+ H   G  RP+  + + P
Sbjct: 156 GGGRKDRASLQYRGLKA-PPAPLAASEVTNSNSAERRKPHSWWGARRPAGPELQTP 210


>AF112299-1|AAD31593.2|  911|Homo sapiens integral inner nuclear
           membrane protein MAN1 protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -3

Query: 438 GGSEK*RRSGEFAGLLLHPPAWISAAAGTVPNG-ERRQEH---GVHRPSSVQERRP 283
           GG  K R S ++ GL   PPA ++A+  T  N  ERR+ H   G  RP+  + + P
Sbjct: 156 GGGRKDRASLQYRGLKA-PPAPLAASEVTNSNSAERRKPHSWWGARRPAGPELQTP 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,716,857
Number of Sequences: 237096
Number of extensions: 1570028
Number of successful extensions: 3985
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3984
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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