Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   0.94 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   0.94 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   2.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 363 IVFIVRIIGITQFPVRPEFKF 425
           +  + +++GI QFP+   F F
Sbjct: 55  LTLLYKLLGIIQFPISAHFSF 75


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 363 IVFIVRIIGITQFPVRPEFKF 425
           +  + +++GI QFP+   F F
Sbjct: 11  LTLLYKLLGIIQFPISAHFSF 31


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 61  LILKCSPIKENTR 99
           L++K S IKENTR
Sbjct: 108 LLIKLSEIKENTR 120


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 PKSCTKTIACGHNLIGLVG 236
           P +CT     G+  +GLVG
Sbjct: 141 PAACTPDSRVGYGSVGLVG 159


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 64 LSLYKNYNLLFLSNKIF 14
          +SLY + N L L +KIF
Sbjct: 1  MSLYSSINSLVLISKIF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,818
Number of Sequences: 336
Number of extensions: 2289
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)