Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303A09f
(504 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003787-1|AAO41470.1| 854|Drosophila melanogaster LD20919p pro... 192 2e-49
AE014297-957|AAF54391.1| 854|Drosophila melanogaster CG8165-PA ... 192 2e-49
BT012328-1|AAS77453.1| 360|Drosophila melanogaster AT21075p pro... 30 2.0
AE014297-3120|AAF55972.2| 254|Drosophila melanogaster CG5386-PA... 29 3.6
BT025233-1|ABF17924.1| 818|Drosophila melanogaster FI01002p pro... 28 8.3
AY113390-1|AAM29395.1| 98|Drosophila melanogaster RE06652p pro... 28 8.3
AY071041-1|AAL48663.2| 492|Drosophila melanogaster RE13129p pro... 28 8.3
AF289994-1|AAG02459.1| 818|Drosophila melanogaster thyroid horm... 28 8.3
AE014298-2701|AAF48826.2| 486|Drosophila melanogaster CG6106-PA... 28 8.3
AE014297-2394|AAN13749.1| 98|Drosophila melanogaster CG31360-P... 28 8.3
AE013599-3354|AAF46815.2| 818|Drosophila melanogaster CG5465-PA... 28 8.3
>BT003787-1|AAO41470.1| 854|Drosophila melanogaster LD20919p
protein.
Length = 854
Score = 192 bits (469), Expect = 2e-49
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 4/157 (2%)
Frame = +2
Query: 35 LXXDLWSPESFSRDFGDTRVDLVNCASGLVVPNQPARKFWDGFDLAVKRLRDERGAPMVL 214
L DLW P++F RDFGD DL+NC +G +VPNQP R FW+GF KRL D G PM+L
Sbjct: 509 LNLDLWHPQAFCRDFGDKPNDLINCLNGNLVPNQPMRHFWEGFQCMTKRLPDAYGKPMLL 568
Query: 215 KLKDWPPGEDFAELLPARFDDLMRALPLSEYTSRNGKLNLAARLPECFVRPDLGPKM--- 385
KLKDWPPG+DFAE+LP RF DLM+ LP+ EYT R G LN+A+ LP+ FV PDLGPKM
Sbjct: 569 KLKDWPPGDDFAEILPTRFADLMKGLPMPEYTLRTGNLNIASCLPKMFVPPDLGPKMYNA 628
Query: 386 -XXXXXXXXXXXNLHLDVSDAVNVMVHASAPADAPER 493
NLHLD+SDAVN+MV+ P D R
Sbjct: 629 YGSALHPDKGTTNLHLDISDAVNIMVYVGIPQDGDTR 665
>AE014297-957|AAF54391.1| 854|Drosophila melanogaster CG8165-PA
protein.
Length = 854
Score = 192 bits (469), Expect = 2e-49
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 4/157 (2%)
Frame = +2
Query: 35 LXXDLWSPESFSRDFGDTRVDLVNCASGLVVPNQPARKFWDGFDLAVKRLRDERGAPMVL 214
L DLW P++F RDFGD DL+NC +G +VPNQP R FW+GF KRL D G PM+L
Sbjct: 509 LNLDLWHPQAFCRDFGDKPNDLINCLNGNLVPNQPMRHFWEGFQCMTKRLPDAYGKPMLL 568
Query: 215 KLKDWPPGEDFAELLPARFDDLMRALPLSEYTSRNGKLNLAARLPECFVRPDLGPKM--- 385
KLKDWPPG+DFAE+LP RF DLM+ LP+ EYT R G LN+A+ LP+ FV PDLGPKM
Sbjct: 569 KLKDWPPGDDFAEILPTRFADLMKGLPMPEYTLRTGNLNIASCLPKMFVPPDLGPKMYNA 628
Query: 386 -XXXXXXXXXXXNLHLDVSDAVNVMVHASAPADAPER 493
NLHLD+SDAVN+MV+ P D R
Sbjct: 629 YGSALHPDKGTTNLHLDISDAVNIMVYVGIPQDGDTR 665
>BT012328-1|AAS77453.1| 360|Drosophila melanogaster AT21075p
protein.
Length = 360
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +2
Query: 152 WDGFDLAVKRLRDERGAPMVLKLKDWPPGE--DFAELLP--ARFDDLMRALPLSEYTSRN 319
W G L++K + P L WP E + AEL+ RF D+ PLSEY R
Sbjct: 139 WRGKGLSLKYMELVEACPAAL----WPEKEMTELAELIKDHVRFMDIRHLQPLSEYAFRK 194
Query: 320 GK 325
K
Sbjct: 195 TK 196
>AE014297-3120|AAF55972.2| 254|Drosophila melanogaster CG5386-PA
protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 267 ASMISCELSHSPSTPRATGN*TWPRACPSALCDPTS 374
A+ SC+L +PS A + P+A P ALC P S
Sbjct: 203 AAPASCQLGRNPSEVAAPAS---PKATPPALCPPPS 235
>BT025233-1|ABF17924.1| 818|Drosophila melanogaster FI01002p
protein.
Length = 818
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 344 GARPSSVSRCARC 306
GARPS + RCARC
Sbjct: 769 GARPSHIRRCARC 781
>AY113390-1|AAM29395.1| 98|Drosophila melanogaster RE06652p
protein.
Length = 98
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 138 G*LGTTR-PDAQFTRSTRVSPKSREKLSGDHK 46
G LG R DA F ++T PK +E S DH+
Sbjct: 62 GVLGVARLADANFLKATAEKPKEQENTSTDHQ 93
>AY071041-1|AAL48663.2| 492|Drosophila melanogaster RE13129p
protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 47 LWSPESFS-RDFGDTRVDLVNCASGLVVPNQPARKFWDGFDLAVK 178
L++ ES S DFGD V + V N+P RK W+GF A K
Sbjct: 53 LYNTESESVYDFGDL-VLMPGLIDPNVHINEPGRKDWEGFATATK 96
>AF289994-1|AAG02459.1| 818|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP95 protein.
Length = 818
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 344 GARPSSVSRCARC 306
GARPS + RCARC
Sbjct: 769 GARPSHIRRCARC 781
>AE014298-2701|AAF48826.2| 486|Drosophila melanogaster CG6106-PA
protein.
Length = 486
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 47 LWSPESFS-RDFGDTRVDLVNCASGLVVPNQPARKFWDGFDLAVK 178
L++ ES S DFGD V + V N+P RK W+GF A K
Sbjct: 47 LYNTESESVYDFGDL-VLMPGLIDPNVHINEPGRKDWEGFATATK 90
>AE014297-2394|AAN13749.1| 98|Drosophila melanogaster CG31360-PA
protein.
Length = 98
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 138 G*LGTTR-PDAQFTRSTRVSPKSREKLSGDHK 46
G LG R DA F ++T PK +E S DH+
Sbjct: 62 GVLGVARLADANFLKATAEKPKEQENTSTDHQ 93
>AE013599-3354|AAF46815.2| 818|Drosophila melanogaster CG5465-PA
protein.
Length = 818
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 344 GARPSSVSRCARC 306
GARPS + RCARC
Sbjct: 769 GARPSHIRRCARC 781
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,369,337
Number of Sequences: 53049
Number of extensions: 312739
Number of successful extensions: 1236
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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