Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A08f
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   4.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.8  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 141 QNTGTCPESSCACPETSC 194
           +NTG C      C + SC
Sbjct: 99  KNTGRCAFDGICCSQDSC 116


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 CPESSCACPETSC 194
           CP+ S AC + +C
Sbjct: 117 CPDGSLACGDGNC 129


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 39  TRGKETGNSQNTXXXXXXXXXXXXFCKLY*TCVSQNT 149
           T+  E+GN  +              C +Y TCVS  +
Sbjct: 430 TKTPESGNESDGVCTKEGIVRDPSDCSVYYTCVSDGS 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.285    0.107    0.279 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,903
Number of Sequences: 336
Number of extensions: 203
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 18 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (19.7 bits)