Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A08f
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    23   7.2  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            22   9.5  

>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical
          protein protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 73 VFWLLPVSFPRVWTRRTRIS 14
          +FW LP SFP +    T ++
Sbjct: 26 IFWFLPWSFPALSPTTTTLA 45


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 159 PESSCACPETSCACPE 206
           PE+SC C      CP+
Sbjct: 235 PEASCWCNSNPTQCPD 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.285    0.107    0.279 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,294
Number of Sequences: 2352
Number of extensions: 1039
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 18 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 45 (21.7 bits)