Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A08f
         (473 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    27   9.8  
AY118509-1|AAM49878.1|  487|Drosophila melanogaster LD13435p pro...    27   9.8  
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    27   9.8  
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    27   9.8  

>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
            protein.
          Length = 2146

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 129  TCVSQNTGTCPESSCACPETSCACPE 206
            T +  N G C ES  A P+  C CPE
Sbjct: 2035 TDLCSNGGRCVESCGAKPDYYCECPE 2060


>AY118509-1|AAM49878.1|  487|Drosophila melanogaster LD13435p
           protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPETSCACPE 206
           T +  N G C ES  A P+  C CPE
Sbjct: 376 TDLCSNGGRCVESCGAKPDYYCECPE 401


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
            isoform A protein.
          Length = 2146

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 129  TCVSQNTGTCPESSCACPETSCACPE 206
            T +  N G C ES  A P+  C CPE
Sbjct: 2035 TDLCSNGGRCVESCGAKPDYYCECPE 2060


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
            isoform B protein.
          Length = 2189

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 129  TCVSQNTGTCPESSCACPETSCACPE 206
            T +  N G C ES  A P+  C CPE
Sbjct: 2078 TDLCSNGGRCVESCGAKPDYYCECPE 2103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.285    0.107    0.279 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,627,143
Number of Sequences: 53049
Number of extensions: 47745
Number of successful extensions: 58
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 18 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 45 (21.7 bits)