Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303A07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 1.8
SB_28078| Best HMM Match : SGS (HMM E-Value=1.5) 29 2.3
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50240| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 28 4.1
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 28 5.4
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 5.4
SB_23337| Best HMM Match : Ank (HMM E-Value=5.1e-07) 28 5.4
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_31811| Best HMM Match : Keratin_B2 (HMM E-Value=0.029) 27 7.1
SB_12439| Best HMM Match : Transthyretin (HMM E-Value=7.7) 27 9.4
SB_40486| Best HMM Match : C2 (HMM E-Value=2.9e-05) 27 9.4
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_2250| Best HMM Match : MgtE_N (HMM E-Value=8.4) 27 9.4
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 33.9 bits (74), Expect = 0.082
Identities = 31/101 (30%), Positives = 41/101 (40%)
Frame = +1
Query: 190 TSEPRKGTGQHAAAFFPNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRA 369
TS P T ++ P++ P + TTT S P + T S A ST+TPR
Sbjct: 50 TSAPSTSTTSNSTTRAPSTSTPR---AGSTTTTSAPSTSTPRTGSTTTTS-APSTSTPRT 105
Query: 370 LSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTIS 492
S TT+ + T STT + ST T T S
Sbjct: 106 GSTTTTSAPSTSTTSNSTTRAPSTSTPRTGSTITLRTSTTS 146
Score = 31.9 bits (69), Expect = 0.33
Identities = 29/89 (32%), Positives = 37/89 (41%)
Frame = +1
Query: 250 RPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTC 429
R T + TT+ S P + T S A ST+TPR S TT+ + T STT
Sbjct: 6 RSTPGTTSITTSTSTPSTSTPRAGSTTNTS-APSTSTPRTGSTTTTSAPSTSTTSNSTTR 64
Query: 430 QDACDVELIPSTPTRHGRTISTGWLPSTG 516
+ ST T + ST P TG
Sbjct: 65 APSTSTPRAGSTTTTSAPSTST---PRTG 90
Score = 27.1 bits (57), Expect = 9.4
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 TLTPSRFTTTLSLPLRGLRYPATVTCLSIAR--STATPRALSMPTTTLALSIITGQSTTC 429
++T S T + S P G + S R ST T A S TT+ + + ST
Sbjct: 13 SITTSTSTPSTSTPRAGSTTNTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPR 72
Query: 430 QDACDVELIPSTPT-RHGRTISTGWLPST 513
+ PST T R G T +T PST
Sbjct: 73 AGSTTTTSAPSTSTPRTGSTTTTS-APST 100
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.5 bits (68), Expect = 0.44
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 238 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTT-TLALSIITG 414
P++ +TPS +T S P P+T + S + +TP LSMP+T ++ + T
Sbjct: 174 PSAPGTPITPSTLSTP-STPST----PSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 228
Query: 415 QSTTCQDACDVELIPSTPTRHGRTISTGWLPST 513
+ + + PSTP+ T ST +PST
Sbjct: 229 STPSTPSTLSTPITPSTPSTPS-TPSTPSMPST 260
Score = 31.5 bits (68), Expect = 0.44
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +1
Query: 238 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTT-TLALSIITG 414
P++ +TPS +T S P P+T + S + +TP LSMP+T ++ + T
Sbjct: 724 PSAPGTPITPSTLSTP-STPST----PSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 778
Query: 415 QSTTCQDACDVELIPSTPTRHGRTISTGWLPST 513
+ + + PSTP+ T ST +PST
Sbjct: 779 STPSTPSTLSTPITPSTPSTPS-TPSTPSMPST 810
Score = 27.1 bits (57), Expect = 9.4
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 238 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 417
P++ TPS +T S P+ P+T + S + TP LS P+T S +
Sbjct: 144 PSTPSTPSTPST-PSTPSTPITP-GTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTP 201
Query: 418 STTCQDACDVEL-IPSTPTRHGRTISTGWLPST 513
ST + L +PSTP+ T ST PST
Sbjct: 202 STPSTPSTPSTLSMPSTPSM-PNTPSTPSTPST 233
Score = 27.1 bits (57), Expect = 9.4
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = +1
Query: 238 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 417
PN+ TPS +TLS P+ P+T + + +TP SMP+T S +
Sbjct: 222 PNTPSTPSTPST-PSTLSTPIT----PSTPS------TPSTPSTPSMPSTPSTPSTPSTP 270
Query: 418 STTCQDACDVELIPSTPTRHGRTISTGWLPST 513
ST C + PSTP+ T ST PST
Sbjct: 271 STPCTP--NTPSTPSTPSMPS-TPSTPSTPST 299
Score = 27.1 bits (57), Expect = 9.4
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 238 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 417
PN+ TPS T S P+ P+T + S + TP LS P+T S +
Sbjct: 697 PNTPSTPSTPS----TPSTPITP-GTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTP 751
Query: 418 STTCQDACDVEL-IPSTPTRHGRTISTGWLPST 513
ST + L +PSTP+ T ST PST
Sbjct: 752 STPSTPSTPSTLSMPSTPSM-PNTPSTPSTPST 783
Score = 27.1 bits (57), Expect = 9.4
Identities = 31/92 (33%), Positives = 42/92 (45%)
Frame = +1
Query: 238 PNSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQ 417
PN+ TPS +TLS P+ P+T + + +TP SMP+T S +
Sbjct: 772 PNTPSTPSTPST-PSTLSTPIT----PSTPS------TPSTPSTPSMPSTPSTPSTPSTP 820
Query: 418 STTCQDACDVELIPSTPTRHGRTISTGWLPST 513
ST C + PSTP+ T ST PST
Sbjct: 821 STPCTP--NTPSTPSTPSMPS-TPSTPSTPST 849
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 116 WQKRDAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLP 259
W+ RD+ +S I AVL KR ++ R K N ++FS P
Sbjct: 4708 WKSRDSDSDSSIDAVLDEMEKRRAGYEDRRKSFENLKRKFSEPSCTSP 4755
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Frame = +1
Query: 208 GTGQHAAAFFPNSC-RPTLTPSRFTTTLSLPLRGLRYPATVTCLS--IARSTATPRALSM 378
G +A F N + T+ P + TL G Y V + + TP +
Sbjct: 1536 GNSSYAHQIFVNGAPQRTIRPGTYQHTLMDLEPGQHYRVHVRARTSQFSLDENTPPSDDD 1595
Query: 379 PTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPST 513
P T+ A+ T + DV L+PS P ++ W+P T
Sbjct: 1596 PLTS-AVEFATEKGGLPDAPLDVTLLPSAPDNAPNSMEVAWMPVT 1639
>SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)
Length = 934
Score = 29.1 bits (62), Expect = 2.3
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRAL-SMPTTTLALSIITGQ 417
+SC T TPS TT SL L A+ L ++ ++ A+ S + L+L+I G
Sbjct: 204 SSCALTTTPSCALTTTSLHPGTLATFASSPSLPVSPLVSSHSAIPSRAKSPLSLTISDGD 263
Query: 418 S-TTCQDA-CDVELIPSTPTRHGRTISTGWLP 507
S +TC + ++ I S P++ + ST P
Sbjct: 264 SASTCSEVKSPIDKIRSMPSKSLSSESTTGSP 295
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +1
Query: 256 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQD 435
T T + +T T++ P P T + +T TP A TTT + T +TT
Sbjct: 97 TATITTYTATVTAPNATTTTPTATTTTTTTTTTTTPYA----TTTTPNTTTTTPNTTTTS 152
Query: 436 ACDVELIPSTPTRHGRTIST 495
P+T T T +T
Sbjct: 153 PNATTTTPNTTTTTPNTTTT 172
>SB_50240| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 128 DAVEESQILAVLRAFSKRFGRHQSRGKVQANTPQRFSRTPVDLPLL 265
D E+ + +R F++ +GR + V+ANT + P L +L
Sbjct: 147 DETEDRRRAETMREFTREYGRGVRQANVRANTKKLTGTLPYSLSML 192
>SB_27891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 259 LTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLAL 399
L P RF + L R R+P ++ S ST R S P + +L
Sbjct: 346 LNPKRFWSIFKLKSRDFRFPGIMSIGSAENSTQPARLASTPASIASL 392
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 28.3 bits (60), Expect = 4.1
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Frame = +2
Query: 194 QSRGKVQANTPQRFSRTP-VDLPLLQVDLR-RPYRCR*EDYGTRLPLPACPSRDLRLLPA 367
+S Q P++ P + LPL D + RP + +PLP PS LP+
Sbjct: 114 ESLSSKQGTPPRKALHPPKMQLPLTSSDPQTRPAMPLPSPSRSEMPLPPTPSSSSESLPS 173
Query: 368 PYLCPQLPSLSR----LLQANLPRAKTRATWS*SLRRPQGMAGPSRQAGCHRPA 517
P P SR L+++N +K+ RP G SR + P+
Sbjct: 174 GTKSPTKPLRSRSSDELVKSNSESSKSNPV-PRPRNRPPPPPGASRSSASKEPS 226
>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 256 TLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQD 435
T T + TTT + AT+T + +T T + TTT + T +TT ++
Sbjct: 6 TTTTTTTTTTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTKN 65
Query: 436 ACDVELIPST 465
D + + +T
Sbjct: 66 NDDDDDVLAT 75
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 319 ATVTCLSIARSTATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPT 471
ATVT + A +TAT A + TT A + T +T A + +T T
Sbjct: 691 ATVTATATATATATATATAATTTATATATATVTATVTAAASATAAVTATVT 741
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 241 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIA--RSTATPRALSMPTTTLALSIITG 414
N+ TLT + T S + P TVT ++A ST+ A S TL + IT
Sbjct: 1818 NTRNATLTLTHHKTETSTAVAMTTVPHTVTTTAVALVNSTSVVMATSTAVATLTSTHITT 1877
Query: 415 QSTT 426
Q+ T
Sbjct: 1878 QTNT 1881
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +1
Query: 253 PTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLA-LSIITGQSTTC 429
P T + TTT L + + +T P P TTLA + I ++T
Sbjct: 476 PVTTMAPDTTTSPATTAALETTMVPETTAASDTTVVPETTDAPATTLAPKTTIAPETTVA 535
Query: 430 QDACDVELIPSTP 468
Q+ D I P
Sbjct: 536 QETTDAPAITMAP 548
>SB_23337| Best HMM Match : Ank (HMM E-Value=5.1e-07)
Length = 213
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 206 KVQANTPQRFSRTPVDLPLLQVDLR 280
KV AN P +F RTP+ +L+ D+R
Sbjct: 140 KVDANLPGQFGRTPLHNAVLKGDMR 164
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 280 TTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 426
T+ ++P+ PAT ++A STAT +++ + + ++ +T STT
Sbjct: 282 TSTTVPVSSHVTPATGCNTTMATSTATVQSIDTEQSPIVITSVTPPSTT 330
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 259 LTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQSTT 426
+T + TTT++ + T+T I + T + TTT+ +IIT TT
Sbjct: 1062 ITITNITTTINTTINTTIITTTITTTIITTTITTTIITTTITTTITTTIITTTVTT 1117
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 277 TTTLSLPLRGL--RYPATVTCLSIARSTATPRALSMPT-TTLALSII 408
TT SLP + PATV+ SIA S TP + S T TTL S++
Sbjct: 1169 TTIYSLPPTSMLNSTPATVSIDSIAPSPTTPPSSSSTTITTLNASVM 1215
>SB_31811| Best HMM Match : Keratin_B2 (HMM E-Value=0.029)
Length = 138
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +1
Query: 244 SCRPTLTPSRFTTTLSLPLRGLRYPATVTC--LSIAR--STATPRAL 372
SCRP ++ PL +RY ++ TC L +AR S+AT R L
Sbjct: 61 SCRPLHVVRYMSSATCRPLHVVRYMSSATCRPLHVARFMSSATCRTL 107
>SB_12439| Best HMM Match : Transthyretin (HMM E-Value=7.7)
Length = 219
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 349 STATPRALSMPTTTLALSIITGQSTTC--QDACDVELIPSTPTRHGRTIST 495
+T T + + TTT + + T +S T Q+ + +P RH R+IST
Sbjct: 91 TTTTNTSPTAATTTASSPVTTMESITKGPQETSTLTAVPKNSIRHRRSIST 141
>SB_40486| Best HMM Match : C2 (HMM E-Value=2.9e-05)
Length = 698
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 161 LRAFSKRFGRHQSRG-KVQANTPQRFSRTPVDLPLLQVDLRRPYRCR 298
L+ +SKRFGR +RG +V+ +R+ + L+ VD+ +CR
Sbjct: 118 LQRYSKRFGRADTRGIRVKNMLHGTGTRSIIRYTLMYVDVLVSAQCR 164
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 363 PRPIYAHNYPRSLDYYRPIYHVPRR-VRRGVDPFDAHKAWQD 485
P P N SL +P+YH P + GV P D + D
Sbjct: 131 PSPAPIQNLTSSLTASQPVYHTPMQGGSNGVTPVDTYAILDD 172
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 349 STATPRALSMPTTTLALSIITGQSTTCQDACDVELIPST 465
+TATP + P TTLA + I TT +A + ++P T
Sbjct: 889 ATATPELTAGPATTLAPTTIGALETT--EAPEFTMVPET 925
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 241 NSCRPTLTPSRFTTTLSLPLRGLRYPATVTCLSIARSTATPRALSMPTTTLALSIITGQS 420
++ P+ T + +T + LP+ + +++ STA P ++M T+T S + Q+
Sbjct: 224 STAMPSPTTRQTSTAIPLPMSRQISAVITSPMAMQTSTAIPSPMAMQTSTAIPSPMAMQT 283
Query: 421 TT 426
+T
Sbjct: 284 ST 285
>SB_2250| Best HMM Match : MgtE_N (HMM E-Value=8.4)
Length = 232
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -1
Query: 518 QPVDGSQPVEMVLPCLVGVEGINSTSHASWHVVDWPVIIERA---RVVVGIDRARGVAVD 348
Q V G + + + PC G + INS S + +++RA R++ +DRA+ V
Sbjct: 71 QSVQGCRCLPELFPCSEGFKEINSISIKLAKLTRVSYLVDRAKLTRILYLVDRAKLTRVL 130
Query: 347 LAMDR 333
+DR
Sbjct: 131 YLVDR 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,887,287
Number of Sequences: 59808
Number of extensions: 399576
Number of successful extensions: 1626
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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