Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VFX9 Cluster: CG11686-PA; n=3; Endopterygota|Rep: CG1...    47   2e-04
UniRef50_A0NBB7 Cluster: ENSANGP00000031397; n=2; Culicidae|Rep:...    47   2e-04
UniRef50_Q55641 Cluster: Ribonuclease D; n=29; Cyanobacteria|Rep...    37   0.32 
UniRef50_A7S654 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ...    36   0.74 
UniRef50_Q8IC31 Cluster: Putative uncharacterized protein MAL7P1...    33   3.0  
UniRef50_A6CQD0 Cluster: Flagellar protein; n=1; Bacillus sp. SG...    32   9.2  
UniRef50_A0D4A2 Cluster: Chromosome undetermined scaffold_37, wh...    32   9.2  

>UniRef50_Q9VFX9 Cluster: CG11686-PA; n=3; Endopterygota|Rep:
           CG11686-PA - Drosophila melanogaster (Fruit fly)
          Length = 70

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +3

Query: 150 VLPFTVCIEALSGLADFLLSVVQFPKYCAQAMMEGR 257
           V  F  CI AL+G++D LL  VQFP YC +AM+EG+
Sbjct: 32  VYAFASCIPALTGISDILLQGVQFPFYCGKAMLEGK 67


>UniRef50_A0NBB7 Cluster: ENSANGP00000031397; n=2; Culicidae|Rep:
           ENSANGP00000031397 - Anopheles gambiae str. PEST
          Length = 70

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = +3

Query: 150 VLPFTVCIEALSGLADFLLSVVQFPKYCAQAMMEGR 257
           + P TVCI  LSG++D LL   QF  YCAQ M+ GR
Sbjct: 32  IYPITVCIPKLSGVSDILLKGAQFAHYCAQCMINGR 67


>UniRef50_Q55641 Cluster: Ribonuclease D; n=29; Cyanobacteria|Rep:
           Ribonuclease D - Synechocystis sp. (strain PCC 6803)
          Length = 217

 Score = 36.7 bits (81), Expect = 0.32
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -1

Query: 329 LKFTIMISIYDTLTTKIMSKLIKSSSFHHGLRAILREL 216
           LK T  I  Y    TKI SK+ ++ + HHGL+ +++EL
Sbjct: 97  LKHTFDIKTYPIFCTKIASKIARTYTSHHGLKTLVQEL 134


>UniRef50_A7S654 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 69

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 156 PFTVCIEALSGLADFLLSVVQFPKYCAQAMMEGR 257
           PF  CI+AL GL + L+  V  P   A+ M+EG+
Sbjct: 33  PFEACIDALKGLTELLMKGVMLPLEVAKHMVEGK 66


>UniRef50_Q8IC31 Cluster: Putative uncharacterized protein
           MAL7P1.15; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.15 - Plasmodium
           falciparum (isolate 3D7)
          Length = 4230

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +1

Query: 250 KEEDLINLDIIFVVNVSYIDIIIV-NFNYGAIYVLKP-FWFVIY 375
           K    +NL   F  NV +++III+ NF++  +Y+L   F+F++Y
Sbjct: 128 KNISFLNLGNFFYDNVHFLEIIILNNFHHNRVYILSTIFYFLLY 171


>UniRef50_A6CQD0 Cluster: Flagellar protein; n=1; Bacillus sp.
           SG-1|Rep: Flagellar protein - Bacillus sp. SG-1
          Length = 796

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -3

Query: 432 VECNTGTPYLSENFPLKRRVNNKPKRFEYIDGTIIKVYYNDID 304
           VE  + TP L+E    K  V NKP   E   GT+ K + +DID
Sbjct: 281 VEITSATPDLNETDSFKVDVVNKPSEVEV--GTLTKTFISDID 321


>UniRef50_A0D4A2 Cluster: Chromosome undetermined scaffold_37, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_37,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1162

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 300 VYRYHYSKL*LWCHLCTQTFLVCYLLSV-LAGNFHSDMVYQCCTLQHKYRTTENKLFYLA 476
           + ++H S      H   Q    CY+  + L  N+HSD+ YQ C  Q   +  +N  F+  
Sbjct: 176 ILKHHLSTQTFTAHPLCQIIRGCYIEHITLKQNYHSDLAYQAC--QQLVKLIDNINFHGL 233

Query: 477 IT 482
           +T
Sbjct: 234 VT 235


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,305,983
Number of Sequences: 1657284
Number of extensions: 10032061
Number of successful extensions: 22085
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22079
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)