Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.7  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 303 YRYHYSKL*LWCHLCTQTFLVCYLLSVLAGNFHSDMVYQC 422
           YR H  +    C  C+++F V   LSV       +  Y+C
Sbjct: 111 YRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKC 150


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 447 YGTYVVECNTGTPYLSENFPLKRRVN 370
           Y  Y++  N    YL+ ++ L+ ++N
Sbjct: 196 YKEYIIPANYSGWYLNHDYNLENKLN 221


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 390 PLKRRVNNKPKRFEYIDGTIIKV 322
           P+  +VNN      +ID T I++
Sbjct: 301 PVTEKVNNDSNSLPFIDRTPIEI 323


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 271 LDIIFVVNVSYIDIIIVNFNYG 336
           ++I+  +  SY+ II    NYG
Sbjct: 272 VEIVMKMKWSYVSIIYEESNYG 293


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 390 PLKRRVNNKPKRFEYIDGTIIKV 322
           P+  +VNN      +ID T I++
Sbjct: 301 PVTEKVNNDSNSLPFIDRTPIEI 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,578
Number of Sequences: 438
Number of extensions: 3346
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)