Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A05f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CBE11 Cluster: C2 domain containing protein; n=...    35   1.3  

>UniRef50_UPI00006CBE11 Cluster: C2 domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: C2 domain containing
           protein - Tetrahymena thermophila SB210
          Length = 757

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 24/77 (31%), Positives = 38/77 (49%)
 Frame = -2

Query: 325 LIVKMLGPMLIVPSHPIMQDKDDVPSPASLKLAIIFFEHN*H*FYGLISDL*EPMFLIIC 146
           LI K+LG  + V  H   ++K ++PSP  LK   I      H + GLI +      ++  
Sbjct: 45  LIEKILGDRIYVLPHDY-KEKSNLPSPNDLKYKFILIGKLPHQYDGLIQEQYTTQDIMKL 103

Query: 145 SLTR*TPYEKLSIFIQP 95
             T+ TP + ++I  QP
Sbjct: 104 QQTQHTPAQNVTISPQP 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,372,660
Number of Sequences: 1657284
Number of extensions: 8208199
Number of successful extensions: 16935
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 16610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16934
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)