Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303A03f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 317 1e-85
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 297 1e-79
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 231 6e-60
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 169 3e-41
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 138 7e-32
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 136 4e-31
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 126 2e-28
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 126 4e-28
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 124 9e-28
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 124 1e-27
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 113 2e-24
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 113 2e-24
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 105 5e-22
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 103 3e-21
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 102 6e-21
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 101 8e-21
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 95 1e-18
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 94 2e-18
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 79 6e-14
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 78 1e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 75 8e-13
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 74 2e-12
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 73 5e-12
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 69 9e-11
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 66 6e-10
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 64 2e-09
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 58 9e-08
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 58 9e-08
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 58 1e-07
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 56 4e-07
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 56 7e-07
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 54 2e-06
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 54 3e-06
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 53 3e-06
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 52 6e-06
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 52 8e-06
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 52 1e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 52 1e-05
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 50 2e-05
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 48 1e-04
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 47 2e-04
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 47 3e-04
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 47 3e-04
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 46 5e-04
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 44 0.002
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 44 0.003
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.004
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 42 0.006
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 42 0.009
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.011
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 40 0.026
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 40 0.026
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 40 0.026
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 40 0.035
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 40 0.046
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.046
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.080
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 38 0.14
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.14
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.14
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 37 0.32
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 36 0.43
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 0.56
UniRef50_Q2HG61 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 33 4.0
UniRef50_UPI000065ED52 Cluster: Complement C5 precursor [Contain... 33 5.2
UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1; Rh... 33 5.2
UniRef50_A0YL57 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q17DQ5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q17A88 Cluster: Sensory neuron membrane protein-1; n=3;... 33 5.2
UniRef50_A6R0K7 Cluster: Predicted protein; n=2; Pezizomycotina|... 33 5.2
UniRef50_A3LYD9 Cluster: Hypothetical transcription factor; n=1;... 33 5.2
UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isof... 32 6.9
UniRef50_Q74AG2 Cluster: Membrane protein, putative; n=2; Geobac... 32 6.9
UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomon... 32 6.9
UniRef50_A1SQS0 Cluster: Putative uncharacterized protein precur... 32 6.9
UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11; Ar... 32 6.9
UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 6.9
UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;... 32 6.9
UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_UPI0001597D68 Cluster: hypothetical protein RBAM_034800... 32 9.2
UniRef50_UPI000023D049 Cluster: hypothetical protein FG01916.1; ... 32 9.2
UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|R... 32 9.2
UniRef50_Q7UI79 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_Q2AHA6 Cluster: Putative uncharacterized protein precur... 32 9.2
UniRef50_A1TSE8 Cluster: TonB-dependent receptor, plug precursor... 32 9.2
UniRef50_Q6CPX1 Cluster: Similar to sp|Q03823 Saccharomyces cere... 32 9.2
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 317 bits (778), Expect = 1e-85
Identities = 144/173 (83%), Positives = 160/173 (92%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
KGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++
Sbjct: 10 KGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRY 69
Query: 183 KTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARA 362
K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR
Sbjct: 70 KIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLART 129
Query: 363 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKA
Sbjct: 130 SGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKA 182
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 297 bits (728), Expect = 1e-79
Identities = 135/173 (78%), Positives = 155/173 (89%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
KGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+F
Sbjct: 10 KGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRF 69
Query: 183 KTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARA 362
K R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARA
Sbjct: 70 KKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Query: 363 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
SGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKA
Sbjct: 130 SGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKA 182
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 231 bits (566), Expect = 6e-60
Identities = 113/173 (65%), Positives = 133/173 (76%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
KG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA V FRDPYK+
Sbjct: 10 KGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKVTFRDPYKY 69
Query: 183 KTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARA 362
K R E FIA EG+YTGQF+YCGKKA L++ RG+LARA
Sbjct: 70 KMRTETFIATEGMYTGQFIYCGKKANLQI------------------------RGKLARA 105
Query: 363 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
SGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGGGRIDKP+LKA
Sbjct: 106 SGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKA 158
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 169 bits (411), Expect = 3e-41
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +3
Query: 99 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 278
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 279 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 440
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 138 bits (334), Expect = 7e-32
Identities = 66/114 (57%), Positives = 81/114 (71%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
K AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P++F
Sbjct: 10 KVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRF 69
Query: 183 KTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 344
K +KELF+ E +YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 70 KKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 136 bits (328), Expect = 4e-31
Identities = 75/170 (44%), Positives = 101/170 (59%)
Frame = +3
Query: 12 GSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTR 191
GS F S + KR G + L GY V DI+H+PG AP+A + + +F
Sbjct: 14 GSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVAKIVTENGVEFFN- 68
Query: 192 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 371
A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G
Sbjct: 69 ----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGT 124
Query: 372 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+A VIG P+ +T ++LPSG + S R VGIVAGGGRI+KP LKA
Sbjct: 125 YAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKA 174
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 126 bits (305), Expect = 2e-28
Identities = 64/163 (39%), Positives = 95/163 (58%)
Frame = +3
Query: 33 TKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 212
+ +R G +S+ E++ IKG++ D + P + F FK EL+IA
Sbjct: 46 SSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIKIKFNVTKYFKNYYELYIAV 105
Query: 213 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 392
E LY + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H
Sbjct: 106 EKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSH 165
Query: 393 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+ T++KLPS K+L S R +G+VAGGG+ +KP+LKA
Sbjct: 166 SKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEKPLLKA 208
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 126 bits (303), Expect = 4e-28
Identities = 65/142 (45%), Positives = 92/142 (64%)
Frame = +3
Query: 96 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGN 275
++G V ++IHDPGR PLA V D +F L A EG+Y GQ + G A E GN
Sbjct: 38 LRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGN 92
Query: 276 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 455
++P+G +PEGT V N+E + GD G+LAR +G++A V+G +T ++LPSG K +P+
Sbjct: 93 ILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPN 150
Query: 456 SNRGMVGIVAGGGRIDKPILKA 521
+R +GI AG GRI+KPI+KA
Sbjct: 151 DSRATIGIPAGAGRIEKPIMKA 172
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 124 bits (300), Expect = 9e-28
Identities = 62/170 (36%), Positives = 97/170 (57%)
Frame = +3
Query: 12 GSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTR 191
G + + + + +G + R D E+ G + G V +++HDP R AP+A V F D
Sbjct: 14 GPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVARVRFEDG-----E 68
Query: 192 KELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 371
+ L + PEG G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G
Sbjct: 69 ERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGC 128
Query: 372 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+AT+I H D RT V+LPSG + R +G+++GGG+ +KP +KA
Sbjct: 129 YATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFVKA 176
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 124 bits (299), Expect = 1e-27
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +3
Query: 81 ERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKA 257
+ + ++G V I HDP R AP+A V F+ +ELF+ A EG+ G + CG A
Sbjct: 34 DENSSLRGEVVGIEHDPARSAPIAKV------AFENGEELFLLASEGIAVGNIIECGDDA 87
Query: 258 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 437
++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A RT V +PSG
Sbjct: 88 EVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGN 145
Query: 438 KKVLPSSNRGMVGIVAGGGRIDKPILKA 521
K L R +VGIVAG GR+D+P LKA
Sbjct: 146 IKWLNPKCRAVVGIVAGSGRVDRPWLKA 173
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 113 bits (272), Expect = 2e-24
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Frame = +3
Query: 36 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 212
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ + A
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKED------DCMVPAS 65
Query: 213 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 392
EG+YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 66 EGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNH 125
Query: 393 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+ T +K+PSG K + S R +VG+VAGGG DKP+LKA
Sbjct: 126 RKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKA 168
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 113 bits (272), Expect = 2e-24
Identities = 67/173 (38%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Frame = +3
Query: 6 GAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
G G + F S + +R G K+ +++ G G V DI+H+PG APLA++ D KF
Sbjct: 11 GRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDGTKF 65
Query: 183 KTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARA 362
+ +GL GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR+
Sbjct: 66 YVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARS 120
Query: 363 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+G + V+G D + VKL S + S+ R +VG+VAGGG +KP+LKA
Sbjct: 121 AGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKA 171
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 105 bits (253), Expect = 5e-22
Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 1/174 (0%)
Frame = +3
Query: 3 KGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 179
+G GS F S T + G K+ + D G + ++KD IH APL VV + +
Sbjct: 11 RGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APLMVVKWENG-- 64
Query: 180 FKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 359
+ L AP G+ G VY GK+A +G++ P+ +PEGT + LE GD G+L R
Sbjct: 65 ---AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVR 121
Query: 360 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
ASG+FA ++ D + V+LPSG K L ++ R ++G++AGGGR +KP +KA
Sbjct: 122 ASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFVKA 173
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 103 bits (246), Expect = 3e-21
Identities = 57/141 (40%), Positives = 85/141 (60%)
Frame = +3
Query: 99 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 278
+G V ++ HDPGR PLA + + F A EG+YTGQ V G A GN+
Sbjct: 43 EGYVVELKHDPGRWVPLAHIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNI 97
Query: 279 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 458
+P+ A+PEGT + N+E + GD G+LAR+ G +A ++G + ++ ++LPSG K + +
Sbjct: 98 LPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAK 155
Query: 459 NRGMVGIVAGGGRIDKPILKA 521
R +GI AG GR +KP+LKA
Sbjct: 156 ARATIGIAAGAGRDEKPLLKA 176
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 102 bits (244), Expect = 6e-21
Identities = 46/64 (71%), Positives = 53/64 (82%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
KGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FRD Y +
Sbjct: 6 KGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFRDVYSY 65
Query: 183 KTRK 194
K K
Sbjct: 66 KLIK 69
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 101 bits (243), Expect = 8e-21
Identities = 54/141 (38%), Positives = 79/141 (56%)
Frame = +3
Query: 99 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 278
+G + D++H+ GR APLA V F D A G G+ + G K+ +E GNV
Sbjct: 41 EGEIIDLVHERGREAPLAKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNV 95
Query: 279 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 458
+ + +P+GTIVCN+E+ GD G + +++G ATV H + VKLPSG L
Sbjct: 96 ISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPK 153
Query: 459 NRGMVGIVAGGGRIDKPILKA 521
NR M+G +AGGG ++P + A
Sbjct: 154 NRAMIGTLAGGGASERPFMSA 174
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 94.7 bits (225), Expect = 1e-18
Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Frame = +3
Query: 105 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVM 281
VVKDIIH PGR +PL + D T K+++ IA G Y GQ + G T+ G
Sbjct: 37 VVKDIIHAPGRNSPL--LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTT 90
Query: 282 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 461
+ +P+G+ V N+E GD G R++G FA V+ H R +KLPSG+ +
Sbjct: 91 VLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMRDFDPRC 147
Query: 462 RGMVGIVAGGGRIDKPILKA 521
R VG+VA G ID PILKA
Sbjct: 148 RATVGVVAASGIIDAPILKA 167
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 93.9 bits (223), Expect = 2e-18
Identities = 53/141 (37%), Positives = 75/141 (53%)
Frame = +3
Query: 99 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 278
+G V D++H+ GR APLA + F D L G G + G K+ + GNV
Sbjct: 40 EGTVIDLVHERGRDAPLAKIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNV 94
Query: 279 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 458
+ V +P+GT VCN+E+ GD G + +++G ATV H +KLPSG L
Sbjct: 95 ISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPK 152
Query: 459 NRGMVGIVAGGGRIDKPILKA 521
NR MVG +AGGG ++P + A
Sbjct: 153 NRAMVGTLAGGGVSERPFMSA 173
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 79.0 bits (186), Expect = 6e-14
Identities = 46/140 (32%), Positives = 78/140 (55%)
Frame = +3
Query: 63 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 242
R +D+ + VK I +DP R A +A++ + D K +AP+GL G V
Sbjct: 63 RLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYADGVK-----SYILAPKGLEVGMQVQ 117
Query: 243 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 422
G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A ++G + K V+
Sbjct: 118 SGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--KEGKYAIVR 175
Query: 423 LPSGAKKVLPSSNRGMVGIV 482
L SG +++ ++R +G V
Sbjct: 176 LSSGEVRLVLLTSRATIGTV 195
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 77.8 bits (183), Expect = 1e-13
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 176
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 177 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 356
K + P G G + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 357 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
RA+G A +I + K +KLPSG +++ + VG V G K + +A
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRA 206
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 75.4 bits (177), Expect = 8e-13
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +3
Query: 33 TKKRKGA---PKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELF 203
T + KG K R +D+ + G + I +DP R A + +V++ D K R LF
Sbjct: 51 TTRHKGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLDGEK---RYILF 107
Query: 204 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 383
+G+ G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G +
Sbjct: 108 A--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQI 165
Query: 384 IGHNPDAKRTRVKLPSG-AKKVL 449
+G + D K ++L SG +KVL
Sbjct: 166 LGKDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 73.7 bits (173), Expect = 2e-12
Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Frame = +3
Query: 9 AGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFK 185
AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V Y+
Sbjct: 71 AGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD----YEGG 124
Query: 186 TRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 365
+AP G G + G ++ ++VGN +P+ +P T + N+E G G+L R++
Sbjct: 125 NASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSA 184
Query: 366 GNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
G+ AT++ D V+LPSG ++++ + +G+++ G ++ I KA
Sbjct: 185 GSAATLVKKADDGGYCVVRLPSGEQRLVLENCMATIGMLSNRGHQNRNIGKA 236
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 72.5 bits (170), Expect = 5e-12
Identities = 42/141 (29%), Positives = 75/141 (53%)
Frame = +3
Query: 63 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 242
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 243 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 422
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 423 LPSGAKKVLPSSNRGMVGIVA 485
L SG ++++ + VG V+
Sbjct: 176 LNSGEQRLVSGACFASVGAVS 196
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 68.5 bits (160), Expect = 9e-11
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Frame = +3
Query: 48 GAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLY 224
G KL R +D+ + V I +DP R A + ++H+ D K I PEGL
Sbjct: 73 GHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYADG-----EKRYIIWPEGLK 127
Query: 225 TGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 377
G V GK ++ GN MP+ +PEGTIV N+E G G++ARA+G +A
Sbjct: 128 VGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWA 187
Query: 378 TVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 482
V+G + V++PSG +++ VG V
Sbjct: 188 QVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV 222
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 65.7 bits (153), Expect = 6e-10
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Frame = +3
Query: 12 GSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKT 188
G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 51 GKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG----- 104
Query: 189 RKELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 365
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++AR++
Sbjct: 105 AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSA 164
Query: 366 GNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 485
G++A ++G + K ++L SG + R VG+V+
Sbjct: 165 GSYARILGQDETGKYVILQLLSGETRKFLKECRATVGVVS 204
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 113
KGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 10 KGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 58.4 bits (135), Expect = 9e-08
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +3
Query: 267 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 446
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 447 LPSSNRGMVGIVA 485
+ S R +GIV+
Sbjct: 419 IDSRCRATIGIVS 431
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 58.4 bits (135), Expect = 9e-08
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Frame = +3
Query: 33 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 206
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG-----ERRYIV 111
Query: 207 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 386
AP GL G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLV 171
Query: 387 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 485
+ + +++ SG + + + + +G V+
Sbjct: 172 A--KEGEYATLRMRSGEMRKVLADCKATIGEVS 202
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 58.0 bits (134), Expect = 1e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +3
Query: 204 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 383
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 384 I-GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
I HN K ++LPSG K P +GIV+ + + KA
Sbjct: 259 IKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDLKKA 302
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 56.4 bits (130), Expect = 4e-07
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Frame = +3
Query: 9 AGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
+G V V H R G K +R +D+A R VV+ I HDPGR A +A+V ++ K
Sbjct: 111 SGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQETKKL 166
Query: 183 KTRKELFIAPEGLYTGQFVYCGKKATLEV---------------------GNVMPVGAMP 299
+A EG+ G V+ E GN +P+ MP
Sbjct: 167 S----YILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLHMMP 222
Query: 300 EGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGI 479
GT+V N+ + G G+L R++G FATVI ++ ++L SG +++ VG+
Sbjct: 223 VGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCATVGV 282
Query: 480 VA 485
+
Sbjct: 283 AS 284
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 55.6 bits (128), Expect = 7e-07
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 176
+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 41 RGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG- 99
Query: 177 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 356
K PEG+ G + G A VGN P MP GT++ +E G G+ A
Sbjct: 100 ----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSA 155
Query: 357 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 476
RA+G A + + +R LP G + +P + +VG
Sbjct: 156 RAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPAVVG 193
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/92 (30%), Positives = 55/92 (59%)
Frame = -1
Query: 347 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 168
T++TH + +AHNGTL S R +I+N + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 167 AEVYNSQRCTSTRVMDYILNNSLDVSMTFSVI 72
AE +S+ + ++D + +++L+V++ + +
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAIPLAEV 98
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +3
Query: 261 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 440
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 441 KVLPSSNRGMVGIVA 485
+ + + +G+V+
Sbjct: 272 RYVHMNCHATLGVVS 286
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 53.6 bits (123), Expect = 3e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 267 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 446
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 447 LPSSNRGMVGIVA 485
+ S R VGIV+
Sbjct: 381 IDSRCRATVGIVS 393
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 53.2 bits (122), Expect = 3e-06
Identities = 31/86 (36%), Positives = 49/86 (56%)
Frame = +3
Query: 264 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 443
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 444 VLPSSNRGMVGIVAGGGRIDKPILKA 521
+ S +GIV+ + + KA
Sbjct: 353 AVDSRCHATIGIVSNPSHGTRKLRKA 378
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 52.4 bits (120), Expect = 6e-06
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Frame = +3
Query: 3 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 182
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 183 KTRKELFIAPEGLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 359
K I L FV K +L GN + + GT++ +E G +R
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSR 131
Query: 360 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 476
+SG+ + +I D K +KLPSG KK + + +G
Sbjct: 132 SSGSESEII--FKDNKFGVIKLPSGIKKKISLNCMATIG 168
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 52.0 bits (119), Expect = 8e-06
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +3
Query: 63 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF----RDPYK--FKTRKELFIAPEGLY 224
R +D+ +R+ + G V+ I +DP R + +A+V + P TR +A +
Sbjct: 45 RRIDF-QRNTSLTGKVERIEYDPNRSSWIALVRWYSGSTQPQHQTASTRFTYILACDKFK 103
Query: 225 TGQFVYCGKKA--TLE--VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 392
TG V + LE +GN + + +P GT++ N+E G + RA+G FA +I
Sbjct: 104 TGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI-- 161
Query: 393 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 485
R++LPSGA + S R +GIV+
Sbjct: 162 QKHEATVRLRLPSGALASINSQCRATIGIVS 192
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = +3
Query: 267 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 446
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 447 LPSSNRGMVGIVAGGGRIDKPILKA 521
+ + R +G V+ K + KA
Sbjct: 73 INAKCRATIGTVSNPSHGTKKLYKA 97
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/86 (34%), Positives = 49/86 (56%)
Frame = +3
Query: 264 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 443
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 444 VLPSSNRGMVGIVAGGGRIDKPILKA 521
++ S R +GIV+ + + KA
Sbjct: 417 LIDSRCRATIGIVSNPNHGARKLRKA 442
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 50.4 bits (115), Expect = 2e-05
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Frame = +3
Query: 6 GAGSVFVSHTKKRKGA--PKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 176
G +V+ T +R+G KL R +D+ + V + +DP R A LA++ + +
Sbjct: 41 GGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYENG- 99
Query: 177 KFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGAMPEGTIVCNLEEKMGDRG 347
K IAP GL G + KATL GN P+ +P T + +E G
Sbjct: 100 ----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPSTKLHCVELVPGKGA 155
Query: 348 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+L R +G ++ + ++K+PSG +++ R +G V G +++ + KA
Sbjct: 156 QLGRTAGTSIELVA--VENGYAQLKMPSGEIRLVNPKCRATIGEVGNGEHMNRKLGKA 211
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 195 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 305
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 48.0 bits (109), Expect = 1e-04
Identities = 38/153 (24%), Positives = 71/153 (46%)
Frame = +3
Query: 63 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 242
R +DY I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 243 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 422
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 423 LPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
L SG + + S+ +G ++ I + KA
Sbjct: 157 LKSGELRRVHSNCMATIGSISNFQYIYRNFRKA 189
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/88 (27%), Positives = 46/88 (52%)
Frame = +3
Query: 258 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 437
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 438 KKVLPSSNRGMVGIVAGGGRIDKPILKA 521
+ + +G+V+ ++ + KA
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGKA 321
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.8 bits (106), Expect = 3e-04
Identities = 35/109 (32%), Positives = 55/109 (50%)
Frame = +3
Query: 105 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 284
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 285 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 431
+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 46.8 bits (106), Expect = 3e-04
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Frame = +3
Query: 57 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFK-------------TRKE 197
++R +D+A R +V+ I HDPGR A +A+V ++ K +
Sbjct: 125 RIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQETQKLSYILAAEGMRAGDVVQSY 183
Query: 198 LFIAPEGLYT--GQFVYCGKKA--TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 365
+ PE L+ G V G A T GN +P+ +P GT++ N+ + G G+L R++
Sbjct: 184 MSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSA 243
Query: 366 GNFATVIGHNPDAK 407
G +ATVI D K
Sbjct: 244 GTYATVISKGSDTK 257
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 46.0 bits (104), Expect = 5e-04
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Frame = +3
Query: 9 AGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---RDPY 176
AG V H + G +L R +D+ G V+ + +DP R A LA++ R+
Sbjct: 105 AGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAREGE 162
Query: 177 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 338
+ T +AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 163 RSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 294 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 473
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 474 GIVAGGGRIDKPILKA 521
G V G K + +A
Sbjct: 61 GQVGNVGVNQKSLGRA 76
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = -1
Query: 521 SFQNRFVNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIVS--NHSGEVSR 363
S Q+ V+T+T+SNNT++ SV WQN L +RR L + T +R+ S N +V R
Sbjct: 31 SLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 43.6 bits (98), Expect = 0.003
Identities = 40/135 (29%), Positives = 67/135 (49%)
Frame = +3
Query: 114 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 293
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 294 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 473
+ G+ + N+E + +G L + + N +I D T VKLPSG K+L + ++
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLLLKNLFCIL 183
Query: 474 GIVAGGGRIDKPILK 518
G + +++K I K
Sbjct: 184 GQLEIRRKVNKNIKK 198
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 43.2 bits (97), Expect = 0.004
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 105 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 284
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 285 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 431
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +3
Query: 261 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 440
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 441 KVLPSSNRGMVGIVA 485
+ + +G+V+
Sbjct: 280 RYISLDCHATLGVVS 294
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 41.9 bits (94), Expect = 0.009
Identities = 24/94 (25%), Positives = 45/94 (47%)
Frame = -1
Query: 473 DHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRH 294
+H S + W NLL R L IR+V++ + ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 293 SSNRHHISNFKSCFLSTINKLACVEPFGSNEELL 192
+ ++ + FL+ N+LA V ++ +
Sbjct: 128 RAQGQNVIGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 41.5 bits (93), Expect = 0.011
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -1
Query: 347 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 168
T +TH + +AHNGTL S R +I+N + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 167 AE 162
AE
Sbjct: 79 AE 80
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 40.3 bits (90), Expect = 0.026
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +3
Query: 108 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 272
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 273 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 386
+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 40.3 bits (90), Expect = 0.026
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Frame = +3
Query: 57 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTG-- 230
KL +D+ + + V + +DP R + +VH + + F+ R + +AP+G + G
Sbjct: 34 KLLKIDFFRKPSHNSFKVLNFFYDPNRSCKVIIVH--NVHTFQPR--IVLAPKGAFQGIN 89
Query: 231 QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR 410
F + + + +G + G+ V +++ + R++G+ V+ D
Sbjct: 90 LFDFTKENPSNSIGCSQFFHNINVGSYVYSIQSTPNSKMTFIRSAGSQGQVV--KKDHYF 147
Query: 411 TRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
T VK+PS K S+ R +G V ++KA
Sbjct: 148 TFVKIPSSEVKKFSSNCRACLGQVGNESHFLSSLMKA 184
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 40.3 bits (90), Expect = 0.026
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 30 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 209
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 210 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 374
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 375 ATVI 386
++
Sbjct: 214 GVLL 217
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 39.9 bits (89), Expect = 0.035
Identities = 36/153 (23%), Positives = 70/153 (45%)
Frame = +3
Query: 63 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 242
R +D+ I G+V+ I +DP R A +A++ + D K K + E + + +
Sbjct: 37 RIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKTNELEVSDKIIS 92
Query: 243 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 422
L+ GN + + GT++ E +G +R++G+ + +I N + +K
Sbjct: 93 SLNNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GIIK 150
Query: 423 LPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
L SG KK + + +G + ++K + KA
Sbjct: 151 LSSGIKKKISINCMATIGKIC-TFNLNKKLYKA 182
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 39.5 bits (88), Expect = 0.046
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 108 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 284
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 285 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 386
+GA+P GT+V NLE + G RA+G ++
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.046
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +3
Query: 99 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEVGN 275
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 276 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 455
+ + +P GTI+ N+ + + +++GNFA +I D + ++KLPSG P
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPI 188
Query: 456 SNRGMVGIVA 485
++ +G ++
Sbjct: 189 TSLATIGSIS 198
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.080
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 270 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 449
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 37.9 bits (84), Expect = 0.14
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Frame = +3
Query: 12 GSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP-YKFK 185
G + V H K +G KL R +D+ I VV+ + +DP R + +V++++ Y F
Sbjct: 45 GHITVYH--KERGHKKLYRLVDFYYLKD-IPYVVESLEYDPNRSGFINLVYYKNGIYSF- 100
Query: 186 TRKELFIAPEGLYTGQFVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 359
+A + G C K L+ GN +P G+IV N+ ++ + R
Sbjct: 101 -----ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKAKYLR 155
Query: 360 ASGNFATVIGHNPDAKRTRVKLPS 431
++G F ++ + VKLPS
Sbjct: 156 SAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 270 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 386
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.14
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 249 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 392
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 36.7 bits (81), Expect = 0.32
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +3
Query: 249 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 428
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 429 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 521
S +++ + +G V+ I+K I K+
Sbjct: 161 SKECRLISNECYATIGTVS---NIEKKIKKS 188
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 36.3 bits (80), Expect = 0.43
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +3
Query: 228 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 407
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 408 RTRVKLPSGAKKVL 449
+KLPSG ++L
Sbjct: 167 YVTIKLPSGEIRLL 180
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 0.56
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 428
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q2HG61 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 734
Score = 34.3 bits (75), Expect = 1.7
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 3/129 (2%)
Frame = -2
Query: 466 PLLLDGRTFLAPDGSFTLVRLASGLCPITVAKF--PEARARRPLSPIFSSRLHTMVPSGI 293
P DGRTF+ L G C + K P A P SS + PSG
Sbjct: 315 PFCEDGRTFIHQAADSVLEASQKGECAVLTVKVKPPPATTSTPTPSANSS--ESTDPSGP 372
Query: 292 AP-TGITFPTSRVAFFPQ*TNWPV*SPSGAMKSSFLVLNLYGSRKCTTAKGAPLPGSWII 116
P T RV P +++ + P+ A++ +Y R+ A AP +
Sbjct: 373 RPRTRPATQEERVPIPPTISHFVMNLPATAIEFLSSYRGVYAGREALFAAAAPTSTTTTT 432
Query: 115 SLTTPLMYP 89
+ TTP + P
Sbjct: 433 TTTTPALPP 441
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 4.0
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 315 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 449
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 33.1 bits (72), Expect = 4.0
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -2
Query: 496 RPPPA---TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT--VAKFPEARARRP 344
R PP T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
>UniRef50_UPI000065ED52 Cluster: Complement C5 precursor [Contains:
Complement C5 beta chain; Complement C5 alpha chain; C5a
anaphylatoxin; Complement C5 alpha' chain].; n=1;
Takifugu rubripes|Rep: Complement C5 precursor [Contains:
Complement C5 beta chain; Complement C5 alpha chain; C5a
anaphylatoxin; Complement C5 alpha' chain]. - Takifugu
rubripes
Length = 1281
Score = 32.7 bits (71), Expect = 5.2
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Frame = +3
Query: 126 DPGRGAPLAVVHFRDPYKFKTRKELFIAPEG----LYTG-----QFVYCGKKATLEVGNV 278
+PG V+ + K K+L + PEG L +G Q +Y +K T+E+ N
Sbjct: 819 EPGEHTLTFVLKTQHGQKDVVEKKLRVVPEGIKRELLSGGRLDPQGLYGSQKITVELKNT 878
Query: 279 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 437
+P +P T+V E + G + + T + H+PD R V LP+G+
Sbjct: 879 LPSNMVPN-TVV---ERMLTINGEVL----DDITSVVHSPDGLRQLVNLPAGS 923
>UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Glycosyl
transferase, family 2 - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 32.7 bits (71), Expect = 5.2
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 291 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM 470
A+PE T +CNL E D+G +A A+G V G N + + R +L +G + LP + +
Sbjct: 88 AVPEPTWLCNLSEAFKDQG-VAAATG---FVRGRNGISFQWRGRLVNGQSQTLPITTKSD 143
Query: 471 VGIVAG 488
++ G
Sbjct: 144 DPMIVG 149
>UniRef50_A0YL57 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 620
Score = 32.7 bits (71), Expect = 5.2
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = -2
Query: 499 IRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPI--FS 326
I P PAT+ + PL D + +P + ++RLA+ L P +A F + + RPL + S
Sbjct: 171 IAPQPATVTSKPLPDDPNSPSSPALTPWMIRLAAQLDPAAIAPF-SSLSERPLDGLEQVS 229
Query: 325 SRLHTM----VPSGIAPTGITF 272
R T VP G P TF
Sbjct: 230 DRHQTTLTFNVPVGWRPVVSTF 251
>UniRef50_Q17DQ5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1433
Score = 32.7 bits (71), Expect = 5.2
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 309 IVCNLEEKMGDRGRLARASGNFATVIGHNP-DAKRTRVKLPSGAKKVLPSSNRGMVGIVA 485
I CN K+G +R +GN P D +RT+ K G+ K+ + VGIV
Sbjct: 124 INCNESVKVGKSENTSRINGNQCNSSLATPIDGERTK-KEDDGSTKLCDTGGSTAVGIVG 182
Query: 486 GGG 494
GGG
Sbjct: 183 GGG 185
>UniRef50_Q17A88 Cluster: Sensory neuron membrane protein-1; n=3;
Culicidae|Rep: Sensory neuron membrane protein-1 - Aedes
aegypti (Yellowfever mosquito)
Length = 529
Score = 32.7 bits (71), Expect = 5.2
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 306 TIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP--SGAKKVLPSSNRGMVGI 479
T + N+ G A+ G TV+GH PD+K V P AK +L +S R + +
Sbjct: 452 TKMVNVTPVQSVNGSSAKGKGAGMTVVGHQPDSKGGSVTAPVIPSAKDLLQNS-RNLPTV 510
Query: 480 VAGGGRIDKP 509
+ G +DKP
Sbjct: 511 IEG---LDKP 517
>UniRef50_A6R0K7 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 325
Score = 32.7 bits (71), Expect = 5.2
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 365 WKLRHCDWTQS*C*AYKSKATVWSQEGSAIKQQRHGRYCCWR 490
W L H DWT K +WS E S I R G Y WR
Sbjct: 48 WCLDHQDWTLE-----DWKRVIWSDEASVILLHRRGGYRIWR 84
>UniRef50_A3LYD9 Cluster: Hypothetical transcription factor; n=1;
Pichia stipitis|Rep: Hypothetical transcription factor -
Pichia stipitis (Yeast)
Length = 756
Score = 32.7 bits (71), Expect = 5.2
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = -1
Query: 374 EVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSN--E 201
E S T S+ H L K + SSN +H+S KS F + +N V G N
Sbjct: 453 ENSHSTKNAHSVDHSLVKNRELDQVSSSSNSNHLSLKKSAFSNWLNNPNQVHTVGGNPSA 512
Query: 200 ELLPCLELVWIAEV-YNSQRCTSTRVMDYILNNSLD 96
L+P L+ ++ YNS S + NNS+D
Sbjct: 513 NLIPLSPLLNDSDTEYNSSNTAS------LNNNSID 542
>UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isoform
N2-A; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to titin isoform N2-A - Strongylocentrotus
purpuratus
Length = 10984
Score = 32.3 bits (70), Expect = 6.9
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +3
Query: 279 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSS 458
+P+ P T+ ++EK D GR +AS + + N DA+RT SG + S+
Sbjct: 8790 VPISGTPTPTVAWLMDEKQVDDGRRIKASTTTYSAVLTNKDARRT----DSGTYTIKISN 8845
Query: 459 NRGMVGIVAGGGRIDKP 509
G +DKP
Sbjct: 8846 KAGTDTATIRVAVLDKP 8862
>UniRef50_Q74AG2 Cluster: Membrane protein, putative; n=2;
Geobacter|Rep: Membrane protein, putative - Geobacter
sulfurreducens
Length = 832
Score = 32.3 bits (70), Expect = 6.9
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 282 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 461
P A+ E T++ L ++GDR RL A+ A V+ PD L G + + +++
Sbjct: 136 PGRAIAEQTLLDRLGLRVGDRLRLGDATLTVADVVTQEPDRPVNVFSL--GPRLFVAAAD 193
Query: 462 RGMVGIVAGGGRIDKPIL 515
+G+V G R+ I+
Sbjct: 194 LPSLGLVGQGSRVSHTII 211
>UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Conserved domain protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 279
Score = 32.3 bits (70), Expect = 6.9
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 42 RKGAPKLRSLDYAERHGYIKGVVKDIIH---DPGRGAPLAVVHFRDPYKFKTRKELFIAP 212
R AP+ AE G GV D +H DPG A + H R + R + P
Sbjct: 33 RAAAPRQADRTIAEIAGRSGGVYSDDLHAARDPGASAAFRLAHKRRLEALRMRGVVTRRP 92
Query: 213 EGLYTGQFVYCGKKATLE 266
+G + Y + ATLE
Sbjct: 93 DGTWDVPADYLERAATLE 110
>UniRef50_A1SQS0 Cluster: Putative uncharacterized protein
precursor; n=1; Nocardioides sp. JS614|Rep: Putative
uncharacterized protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 400
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 487 PATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEA 359
P +PT LD RT DG TL RLA+G+ T A A
Sbjct: 223 PDEVPTYRCRLDDRTVACTDGLTTLRRLAAGMHRFTAASVDPA 265
>UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11;
Arabidopsis thaliana|Rep: DC1 domain-containing protein
- Arabidopsis thaliana (Mouse-ear cress)
Length = 692
Score = 32.3 bits (70), Expect = 6.9
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 326 FKIAHNGTLRHSSNRH-HISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 168
FK + T+ H S+RH H+S K S+ K AC P GS+ L C E +I
Sbjct: 363 FKRNDDNTIDHFSHRHNHMSLDKGGEESSFCK-ACAHPIGSSSSLYKCSECSFI 415
>UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep:
MAP4K1 protein - Bos taurus (Bovine)
Length = 847
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 36 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 173
KKR A K+ + + G +G++ D++ +PG+GAP+ + DP
Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335
>UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;
n=1; Babesia bovis|Rep: Mac/perforin domain containing
protein - Babesia bovis
Length = 752
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 117 IIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATL 263
I+ DPG A + +H+RD + + FI P+G + + C K T+
Sbjct: 442 ILLDPGYRASVVQMHWRDDAEGLSNSRHFIQPKGAWVRPYTSCHKGETI 490
>UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 348
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 382 TVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVA 254
+VA PEA A P SP+FS R+ P P TFP S+++
Sbjct: 3 SVAYEPEALAFDP-SPLFSQRVQRWEPGASKPNPDTFPFSKIS 44
>UniRef50_UPI0001597D68 Cluster: hypothetical protein RBAM_034800;
n=1; Bacillus amyloliquefaciens FZB42|Rep: hypothetical
protein RBAM_034800 - Bacillus amyloliquefaciens FZB42
Length = 319
Score = 31.9 bits (69), Expect = 9.2
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -1
Query: 344 SITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 168
SITH +F I G + +H+ + K L + C+E ELL C + I
Sbjct: 188 SITHTIFYITDMGCSSLTDKEYHLPSLKEKVLKFLGIYICLENLDITSELLMCSSFLHI 246
>UniRef50_UPI000023D049 Cluster: hypothetical protein FG01916.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG01916.1
- Gibberella zeae PH-1
Length = 1596
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 318 NLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGR 497
NL + DRGR+ A + + NPD L + V RG G++ GG+
Sbjct: 923 NLANAVKDRGRINDAISYYKRAVNSNPDFAEAVCGLSTALNSVCDWRGRG--GVILKGGK 980
Query: 498 IDK 506
D+
Sbjct: 981 YDR 983
>UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|Rep:
DNA gyrase subunit A - Leptospira interrogans
Length = 834
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 234 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR- 410
+V C K +GN P G + + ++ R L GNF ++ G NP A R
Sbjct: 87 YVKCAKIVGEVIGNYHPHGDASVYEALVRMVQEFSLRVPLIDGQGNFGSIDGDNPAAYRY 146
Query: 411 TRVKLPSGAKKVL 449
T +L A+++L
Sbjct: 147 TEARLEKVAEELL 159
>UniRef50_Q7UI79 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 463
Score = 31.9 bits (69), Expect = 9.2
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = -2
Query: 394 LCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVAFFPQ*TNWPV*-- 221
L V P AR L+ F++ L ++ SG A T + PT + P TN PV
Sbjct: 16 LSEFAVQSQPTPHARLCLA-WFATGLVALLISGCA-TPVASPTKSLTSKPVPTNSPVHQI 73
Query: 220 --SPSGAMKSSFLVLNLYGSRKCTT 152
+P+GA K + V +LYGS T+
Sbjct: 74 AQAPTGAAKPALDVASLYGSTSVTS 98
>UniRef50_Q2AHA6 Cluster: Putative uncharacterized protein
precursor; n=1; Halothermothrix orenii H 168|Rep:
Putative uncharacterized protein precursor -
Halothermothrix orenii H 168
Length = 198
Score = 31.9 bits (69), Expect = 9.2
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 503 VNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLF 324
+NTS + +T ++ L G+R LYS + IR+ + S +R +T +T
Sbjct: 29 INTSDNPESTPDKQTGTYRELKGARLTLYSKSKDIRLEVSSSNVTNRDNNKTIDMTGIEV 88
Query: 323 KIAHNGT 303
K+ N T
Sbjct: 89 KVRDNKT 95
>UniRef50_A1TSE8 Cluster: TonB-dependent receptor, plug precursor;
n=1; Acidovorax avenae subsp. citrulli AAC00-1|Rep:
TonB-dependent receptor, plug precursor - Acidovorax
avenae subsp. citrulli (strain AAC00-1)
Length = 737
Score = 31.9 bits (69), Expect = 9.2
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = -2
Query: 520 AFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPL 341
A ++GL++R PA+I +P R LA GS T+ A + FP A +
Sbjct: 58 ASRLGLTVRETPASIDVVP-----REMLAERGSRTVSEAAQAAVGVLAGDFPAEPAAFSM 112
Query: 340 SPIFSSRLHTMVPSGIAPTGITFPTSRV 257
+S+++T+ +GI G TSRV
Sbjct: 113 RGFANSQINTLY-NGI-KIGPPNMTSRV 138
>UniRef50_Q6CPX1 Cluster: Similar to sp|Q03823 Saccharomyces
cerevisiae YMR160w singleton; n=1; Kluyveromyces
lactis|Rep: Similar to sp|Q03823 Saccharomyces
cerevisiae YMR160w singleton - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 716
Score = 31.9 bits (69), Expect = 9.2
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -2
Query: 439 LAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIAPT 284
L DG ++ S CP+ ++K+P R+ S I +++ T++P G++PT
Sbjct: 107 LDSDGVLSVYNTGSATCPLPLSKYPLLPQRK--STIINAKNSTIIP-GVSPT 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,599,637
Number of Sequences: 1657284
Number of extensions: 12682097
Number of successful extensions: 37212
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 36005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37173
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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