Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303A02f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 53 5e-07
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 53 5e-07
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 53 5e-07
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 53 5e-07
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 53 5e-07
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 31 1.9
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 31 1.9
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 31 1.9
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 31 1.9
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 31 1.9
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 31 1.9
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KY LGYKQTLK +RQGKAKLVI+A N P LR
Sbjct: 26 KYVLGYKQTLKMIRQGKAKLVILANNCPALR 56
Score = 48.0 bits (109), Expect = 2e-05
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 64 MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
MVAAKK KK++ESINSRL LVMKSGK +L + + RQ KA
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLK--MIRQGKA 43
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KY LGYKQTLK +RQGKAKLVI+A N P LR
Sbjct: 26 KYVLGYKQTLKMIRQGKAKLVILANNCPALR 56
Score = 48.0 bits (109), Expect = 2e-05
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 64 MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
MVAAKK KK++ESINSRL LVMKSGK +L + + RQ KA
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLK--MIRQGKA 43
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KY LGYKQTLK +RQGKAKLVI+A N P LR
Sbjct: 26 KYVLGYKQTLKMIRQGKAKLVILANNCPALR 56
Score = 48.0 bits (109), Expect = 2e-05
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 64 MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
MVAAKK KK++ESINSRL LVMKSGK +L + + RQ KA
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLK--MIRQGKA 43
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KY LGYKQTLK +RQGKAKLVI+A N P LR
Sbjct: 26 KYVLGYKQTLKMIRQGKAKLVILANNCPALR 56
Score = 48.0 bits (109), Expect = 2e-05
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 64 MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
MVAAKK KK++ESINSRL LVMKSGK +L + + RQ KA
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLK--MIRQGKA 43
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 53.2 bits (122), Expect = 5e-07
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KY LGYKQTLK +RQGKAKLVI+A N P LR
Sbjct: 26 KYVLGYKQTLKMIRQGKAKLVILANNCPALR 56
Score = 48.0 bits (109), Expect = 2e-05
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = +1
Query: 64 MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
MVAAKK KK++ESINSRL LVMKSGK +L + + RQ KA
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLK--MIRQGKA 43
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KYC G + TLK L G +++I+ +N +R
Sbjct: 300 KYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KYC G + TLK L G +++I+ +N +R
Sbjct: 300 KYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KYC G + TLK L G +++I+ +N +R
Sbjct: 267 KYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KYC G + TLK L G +++I+ +N +R
Sbjct: 300 KYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KYC G + TLK L G +++I+ +N +R
Sbjct: 267 KYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 31.5 bits (68), Expect = 1.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
KYC G + TLK L G +++I+ +N +R
Sbjct: 300 KYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,525,209
Number of Sequences: 237096
Number of extensions: 1346199
Number of successful extensions: 1691
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1691
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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