Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303A02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p pro...    60   1e-09
AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p pro...    60   1e-09
AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-P...    60   1e-09
AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-P...    60   1e-09

>AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p
           protein.
          Length = 111

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
           KYCLGYKQTLKTLRQGKAKLV+IA N P LR
Sbjct: 26  KYCLGYKQTLKTLRQGKAKLVLIASNTPALR 56



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +1

Query: 64  MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
           MVA KKQKK +ES N+RL LVMKSGK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLELVMKSGKYCLGYKQTLK--TLRQGKA 43


>AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p
           protein.
          Length = 111

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
           KYCLGYKQTLKTLRQGKAKLV+IA N P LR
Sbjct: 26  KYCLGYKQTLKTLRQGKAKLVLIASNTPALR 56



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +1

Query: 64  MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
           MVA KKQKK +ES N+RLALVMKSGK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43


>AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-PB,
           isoform B protein.
          Length = 111

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
           KYCLGYKQTLKTLRQGKAKLV+IA N P LR
Sbjct: 26  KYCLGYKQTLKTLRQGKAKLVLIASNTPALR 56



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +1

Query: 64  MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
           MVA KKQKK +ES N+RLALVMKSGK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43


>AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-PA,
           isoform A protein.
          Length = 111

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +2

Query: 140 KYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 232
           KYCLGYKQTLKTLRQGKAKLV+IA N P LR
Sbjct: 26  KYCLGYKQTLKTLRQGKAKLVLIASNTPALR 56



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = +1

Query: 64  MVAAKKQKKTIESINSRLALVMKSGKILLRIQANFENSSTRQSKA 198
           MVA KKQKK +ES N+RLALVMKSGK  L  +   +  + RQ KA
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLK--TLRQGKA 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,170,719
Number of Sequences: 53049
Number of extensions: 415473
Number of successful extensions: 650
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)